@anoushkagupta8.bsky.social @anoushkagupta8.bsky.social PhD student, Johns Hopkins with Prof. Ishan Barman | biophotonics × machine learning
Matt Lycas @lycasworks.bsky.social Neuroscientist and Super-Resolution Microscopist
Ruth Hornbachner @rhornb.bsky.social PhD @ Pelkmans lab, University of Zurich
Bioimage Analysis | Developmental Biology
Image Cooperative @image.coop We are a cooperative of imaging scientists dedicated to advancing open standards and open source technology in scientific image data analysis, storage, and dissemination.
https://image.coop
CCP-volumeEM @ccp-volumeem.bsky.social A community for computational practitioners working in volume electron microscopy (vEM)
Website: https://www.ccp-volumeem.ac.uk/
Join our mailing list at https://bit.ly/ccp-volume-em
Kyle Harrington @kyleharrington.com Images, AI, ML, and ALife.
Former: @hampshirecolg
@brandeisuniversity.bsky.social
@harvardmed.bsky.social
@uidaho.bsky.social
@hhmijanelia.bsky.social
@mdc-berlin.bsky.social
@ORNL.
Now @biohub.org.
Opinions are mine.
Jakob Troidl @jakobtroidl.bsky.social ai scientist @janelia • @harvard cs phd • ml / image analysis / connectomics
Olatz Niembro @olatznv.bsky.social 5'3' like DNA 🧬 bioimage analysis enthusiast & Cellular Immunology PhD. Researcher @worboyslab.bsky.social
Natalie Holroyd @natalieah.bsky.social I'm a medical imaging and deep learning scientist at UCL. I love running, hiking and gaming
🔬🏃🏻♀️🥾🎮
Alicia Cuber 🔬 @alicia-cuber.bsky.social PhD student at KCL.
Looking at muscle 💪🏼 with super-resolution fluorescence microscopy. 🔬
🍉🏳️🌈🏳️⚧️
Jordão Bragantini @jookuma.bsky.social Research Scientist in Loic Royer's team at Biohub | 🇧🇷
Martin Jones @martinjones.bsky.social Ex-physicist in a biology institute, working on image analysis and building new hardware at the Francis Crick Institute
ORCID: 0000-0003-0994-5652
Carles Bosch @carlesbosch.bsky.social Scientist studying biological tissues with neuronal circuits inside. Tweets my own.
Aquí, tuitejo el què em passa pel cap molt de tant en tant.
trickymons@X
Niko Sirmpilatze @nikosirmpilatze.com London-based neuroscientist 🧠 & research software engineer 💻 developing free and open-source tools for studying brains & behaviour, @neuroinformatics.dev @sainsburywellcome.bsky.social at UCL.
Committed to open, collaborative, and reproducible science.
Dr Zeinab Rekad 🔬🧬🧪 @zeinabrekad.bsky.social Crazy scientist exploring RNA & RBPs in cancer: from cell edges to the chromatin. Microscopy lover, proteomics newbie. Likes computer sciences, physics, astronomy & photography. Proud co-editor and illustrator of the STEMDORADO science magazine.
Juan Nunez-Iglesias @jni.codes Co-founder, core developer, and steering council member of @napari.org
Also other FOSSy and Science-y things.
I prefer Mastodon (profile at https://fosstodon.org/@jni) but begrudgingly checking things out here. 😂
Rachel Lee, PhD @scientistrachel.bsky.social BioImage Analysis Lead at AIC Janelia
In Otter News @in-otter-news.bsky.social The life and times of Steve the otter...
Raluca Groza @ralucag.bsky.social Postdoc in the Kleele lab, ETH Zürich | HFSP and EMBO fellow | Previously PhD in the Ewers lab, FU Berlin | mitochondria, neurons, super-resolution microscopy
Carsen Stringer @computingnature.bsky.social group leader @ HHMIJanelia, #neuroscience + AI 🔬 #cellpose | diversity and open-science for better science | she/her | https://mouseland.github.io
Siân Culley @superresolusian.bsky.social Still seeking M. Ulder for joint author paper.
Microscopes ✅ cats ✅ combining the two ❌
Lab --> https://www.kcl.ac.uk/research/culley-group
Talley Lambert @talley.codes Microscopist & Python developer at Harvard Med. Creator @fpbase.org
Dave Barry @david-j-barry.bsky.social BioImage Data Analysis at @crick.ac.uk: @crick-ia-team.bsky.social
Science → Reproducible as Data Analysis → Automated
Dubliner 🇮🇪 in London 🇬🇧 | Brunch sceptic | Trophy husband | Dissipator of masculine energy
Ed Hirata @edhirata.bsky.social 🇲🇽🇯🇵
Computer Vision and Machine learning engineer at
CZ Biohub SF || Ph.D || views are my own || (he/him)
Caterina Fuster Barceló @cfusterbarcelo.bsky.social Post-doctoral researcher at BioVision Center, UZH || BioImage Data Scientist || Based in 📍Zurich || Born in Mallorca 🌊||
Ignacio Arganda-Carreras @iarganda.eurosky.social Bioimage analysis and computer vision enthusiast. Whenever I can, I do software too.
Ikerbasque | University of the Basque Country (UPV/EHU) | DIPC | Biofisika Institute
ORCID: 0000-0003-0229-5722
Marina B. Cuenca @cuencam15.bsky.social Argentinian physicist passionate about dissecting biology with microscopy.
PhD with P. Tomancak at MPI-CBG.
Postdoc with T. Dayton at EMBL-Barcelona.
She/her
Giovanni D’Angelo @giodang.bsky.social Lipid cell biologist @EPFL
Crick BioImage Analysis Symposium @cbias.bsky.social Save the dates for CBIAS 2026!
23rd-24th November 2026 (symposium)
25th-26th November 2026 (napari workshop)
https://www.crick.ac.uk/whats-on/crick-bioimage-analysis-symposium-2026
Marvin Albert @m-albert.bsky.social Image Analysis and Data Management at the Department of Biosystems Science and Engineering of ETH Zürich in Basel
Teun Huijben @teunhuijben.bsky.social Scientist/PostDoc with Loïc Royer at Biohub, San Francisco 🔬 image analysis | localization microscopy | machine learning, 🇳🇱 by bike 🚲
📍San Francisco
Jain_Akanksha_ @akanksha-jain.bsky.social Ass. Prof. Of Neural MorphoGenomics @DMLS, Uni Zurich. •4D tissue morphogenesis •Human organoids •Developmental biology •Evolution of tissue mechanics. Previous @ETH @mpicbg @DBS-TIFR
https://akankshajain2022.github.io/AkankshaJain.github.io/
Johannes Soltwedel @jo-soltwedel.bsky.social Research software engineer @gerbi-gmb.de for all things #OME-ZARR, #NGFF, FAIR data.
Physicist, Python code-jockey, train enthusiast.
Nadia Halidi @nadiahalidi.bsky.social Biophysicist, #ImagingScientist, cycling enthusiast. Head of the Advanced Light Microscopy Unit-CRG, Barcelona. 🎓 École Polytechnique Fédérale de Lausanne
Sbalzarini Lab / MOSAIC Group @mosaicgroup.bsky.social We advance scientific machine learning and physics-informed AI for the sciences. We are at the Department of Mathematical Modeling and Machine Learning @uzh-ch.bsky.social. Posts by Ivo Sbalzarini. https://sbalzarini-lab.org
Aafke Gros @aafkegros.bsky.social Check out Microscopy Nodes for handling microscopy data in Blender! Now loading .tif and OME-Zarr with big volume support :)
she/her | IPA: ˈafkə ɡrɔs
Estibaliz Gómez de Mariscal, PhD @gomez-mariscal.bsky.social Mathematician facing biomedical image processing challenges 💻🔬🧚♂️🦄
https://henriqueslab.org/pages/egdmariscal
@embo.bsky.social fellow at @henriqueslab.bsky.social @aiopticalbiolab.bsky.social
Former @arratemunoz.bsky.social @deniswirtz.bsky.social
@jean-maillat.bsky.social @jean-maillat.bsky.social 
@paveltomancak.bsky.social @paveltomancak.bsky.social 
Stephan Saalfeld @herrsaalfeld.bsky.social scalable data analysis, modeling, AI, software design at HHMI Janelia
https://mastodon.social/@herrsaalfeld
Ziwen Liu @newiz.bsky.social 
Francesco Padovani @padovaf.bsky.social Research Scientist in Cell and Computational Biology at Helmholtz Munich | Creator of Cell-ACDC and SpotMAX | Excited about mitochondrial DNA and AI-driven bioimage analysis | Dad of 2
Maria Bernabeu @mariabernabeu.bsky.social Group Leader at EMBL Barcelona. Malaria, bioengineered vascular models, blood-brain barrier
Guillaume Jacquemet @guijacquemet.bsky.social Associate Prof at Abo Akademi University, Turku, Finland.
Cell biologist interested in microscopy and image analysis. My opinions are my own.
cellmig.org
Helena Klara Jambor @helenajambor.bsky.social Data Visualization in Life and Health Science. PhD biology, trained in art, Associate Prof
Writes here: https://helenajamborwrites.netlify.app/
Following science & political content, posting mainly science
Loc: Chur, Dresden, Lüneburg
Denis Schapiro @denisschapiro.bsky.social
Group leader @schapirolab.bsky.social at the Heidelberg University Hospital focusing on #HighlyMultiplexedImaging and #spatialomics #spatialbiology technologies and analysis. President of the European Society for Spatial Biology e.V. (ESSB)
Julius Winter @julius-w.bsky.social Bioengineering PhD now working as computational biologist at SIB developing the Swiss Pathogen Surveillance Platform and answering industry‘s data science questions. 🧬🦠👨💻
Data and image analysis 🌌 | UX & UI design 👨🎨 | Science communication 🧬
Joana Grah @joanagrah.bsky.social #ImageAnalysis Centre for #AI in #PublicHealth Research @rki.de • PhD in applied maths from @cam.ac.uk • co-founder @hermathsstory.bsky.social • #firstgen #scicomm • she/her
Lina Carlini @linacarlini.bsky.social Assistant Professor, Laufer Center for Physical & Quantitative Biology, Stony Brook University
Constantin Pape @cppape.bsky.social Group leader @ Uni Göttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
@canaztekin.bsky.social @canaztekin.bsky.social Group Leader @mpi-bio-fml.bsky.social/Branco Weiss Fellow. Studying how to regrow limbs! Alum: @EPFL ELISIR / @Cambridge_Uni @GurdonInstitute
EN/TR
Anwai Archit @anwaiarchit.bsky.social PhD Candidate at @cppape.bsky.social lab. 
Anjalie Schlaeppi, PhD @anjaliesch.bsky.social Microscopist 🔬 and spatial omics specialist at @EPFL BIOP and histology facilities. I love singing 🎵, improv theater, and tea🍵 she/her
https://go.epfl.ch/spatial
Parc de Recerca Biomèdica de Barcelona @prbb.org We are the largest biomedical science hub in the south of Europe, by the beach in Barcelona.
Recerca biomèdica amb vistes |
@researchmar.bsky.social @crg.eu @melisupf.bsky.social @embl.org @isglobal.org @ibe-barcelona.bsky.social @fpmaragall.bsky.social
Noah Bruderer @noahbruderer.bsky.social PhD candidate @MSarsCentre / Computational biology / Development biology / Image analysis / Data diver
Centre de Regulació Genòmica (CRG) @crg.eu Hola! We are the CRG, a research institute exploring the frontiers of biology in Barcelona. Som un centre CERCA. www.crg.eu
Octavio Reyes-Matte @octavio-rm.bsky.social PhD student
Waterfowl appreciator 🦆🪿🦢
Bioimage analysis 🔬, Quantitative Biology📊 and Deep Learning 💻
Trying to understand the diversity of bacterial cell size and its evolution
From 🇨🇱 in 🇩🇪
he/him
napari @napari.org n-dimensional image viewer for Python
CSIC @csic.es Cuenta del Consejo Superior de Investigaciones Científicas, el mayor organismo público de investigación de España.
www.csic.es
BSC-CNS @bsc-cns.bsky.social BSC-CNS (Barcelona Supercomputing Center-Centro Nacional de Supercomputación) is the National Supercomputing Facility in Spain.
www.bsc.es
Universitat Politècnica de Catalunya - BarcelonaTech (UPC) @upc.edu La universitat pública de l'Enginyeria, l'Arquitectura, les Ciències i la Tecnologia.
https://www.upc.edu/ca
Alexander Krull @alex-krull.bsky.social Assistant Professor at Uni Birmingham. Working on Image processing, denoising, generative image models and other interesting things.
Nick Stroustrup @nstroustrup.bsky.social A British/American group leader at @crg.eu . We study the biology of aging using molecular genetics, engineering, systems biology, and probabilistic machine learning.
Lab page: http://lifespanmachine.crg.eu
James Sharpe @jamesasharpe.bsky.social The choreography of multicellular systems, computer simulations, gene regulatory circuits, and swarm robotics.
Head of EMBL Barcelona
Co-chair of the Barcelona Collaboratorium
Barcelona Collaboratorium @barcelonacollaboratorium.com The Barcelona Collaboratorium for Modelling & Predictive Biology is a joint initiative by @crg.eu & @embl.org, exploring biology's frontiers with computational and theoretical modeling to make systems predictable & controllable. 
Xinyi Huang @xinyihuang.bsky.social PhD student @EPFL 🔬
@morganestorey.bsky.social @morganestorey.bsky.social 
@lucafusarbassini.bsky.social @lucafusarbassini.bsky.social 
@francescaventuri.bsky.social @francescaventuri.bsky.social 
laura @lauralap.bsky.social 🧬🔬🫐⛰️🫧🪼
Alessandro Valente @alessvalente.bsky.social Brain developmental biologist 🧠🧬🔬.
Interested in how gene expression&metabolism shape brain heterogeneity. From Rome 🏛️🇮🇹, living in CH.
Ryan Savill @cryaaa.bsky.social PhD Student with the Jesse Veenvliet Group at the @mpicbg.bsky.social . Interested in all things Data and 3D bioimage analysis, organoids and development!
ScaDS.AI Dresden/Leipzig @scadsai.bsky.social The Center for Scalable Data Analytics and Artificial Intelligence Dresden/Leipzig is an institutionalized national center of excellence for Artificial Intelligence.
👩👩👧👧 scads.ai/about-us/people/
💥 scads.ai/blog/
🧪 scads.ai/research/
EPFL AI Center @epfl-ai-center.bsky.social As a hub for artificial intelligence, the EPFL AI Center leverages the extensive expertise of faculty and researchers across the Institution. It fosters a collaborative environment that nurtures multidisciplinary AI research, education, and innovation.
Lukas Frank @lukfra.bsky.social Postdoc in the Medema-Vader lab working on extrachromosomal DNA 🧬 | Prinses Máxima Center, Utrecht
🇪🇺 MSCA Fellow
🔬Former PhD in the Rippe lab | DKFZ & Heidelberg University
Ibrar Malik @ibrar.bsky.social 3D computer vision, deep learning. DL Lead at Crisalix.
FocalPlane @focalplane.bsky.social FocalPlane is a community site for anyone with an interest in microscopy. Hosted by Journal of Cell Science (@jcellsci.bsky.social) and The Company of Biologists (@biologists.bsky.social).
https://focalplane.biologists.com/
Anna Foix @afoix.bsky.social PhD candidate at EMBL-EBI and the University of Cambridge (Uhlmann Group). Turning bioimages into numbers and finding the stories they hide. Loves math, climbing, and anime
Nessim Louafi @nesslfy.bsky.social PhD Student in Luca Giorgetti's Lab (@lucagiorgetti.bsky.social) - Genome architecture - Microscopy - Image analysis - Biophysics
Diane Adjavon @adjavon.bsky.social Machine Learning Researcher 🖥🔬🧫 🦆 @ Funke Lab, #HHMIJanelia
Views my own.
Max Planck Institute of Molecular Cell Biology and Genetics @mpi-cbg.de How do cells form tissues? Our research program spans the scales from molecules to organisms. News from the Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG) in Dresden, Germany. Impressum: https://www.mpi-cbg.de/impressum
EMBL @embl.org The European Molecular Biology Laboratory drives visionary basic research and technology development in the life sciences. www.embl.org
Jan Funke @janfunkey.bsky.social Group leader at the Human Technopole
Janelia Research Campus @hhmijanelia.bsky.social HHMI’s Janelia Research Campus in Ashburn, Virginia, is innovating research practices and technologies to solve biology’s deepest mysteries. https://www.janelia.org/ 
Nature Methods @natmethods.nature.com A scientific journal publishing cutting-edge methods, tools, analyses, resources, reviews, news and commentary, supporting life sciences research. Posts by the editors.
Pau Rodriguez @paurodriguez.bsky.social Research Scientist at Apple Machine Learning Research. Previously ServiceNow and Element AI in Montréal.
Joel Lüthi @joelluethi.bsky.social Head of Research and Development of the BioVisionCenter at the University of Zurich
Loïc A. Royer 💻🔬🧪 @loicaroyer.bsky.social Sr. Director of Imaging AI @biohub. Researcher at the meeting point of #AI, #Microscopy, and #Biology using #zebrafish as model — co-creator of @napari_imaging and #Omega. #devbio #zebrahub #deeplearning #lightsheet #Imaging #dataviz
Alexander Mathis @trackingskills.bsky.social Hacker, Computational Neuroscience, ML beyond logistic regression, bear and muscle spindle aficionado. Passionate about open source: DeepLabCut, DLC2action, hBehaveMAE — see https://mathislab.org for details.
Gioele La Manno @gioelelamanno.bsky.social Professor at #EPFL - #RNAVelocity inventor - Laboratory of Brain Development and Biological Data Science. Single-cell and spatial biologist studying brain development and lipids. #ERCStg investigator
Ben Gallusser @bengallusser.bsky.social Deep Learning, Computer Vision, Biology
Anirban Ray @anirbanray.bsky.social PhD Student working on bioimaging inverse problems with @florianjug.bsky.social at @humantechnopole.bsky.social + @tudresden.bsky.social | Prev: computer vision Hitachi R&D, Tokyo.
🔗: https://rayanirban.github.io/
Likes 🏸🏋️🏔️🏓 and ✈️
Peter Sobolewski @psobolewskiphd.bsky.social #Duke #UCSD Alum; Recovering Academic; Research IT
@jacksonlab.bsky.social; core dev @napari.fosstodon.org.ap.brid.gy
Brian Northan @truenorth-ia.bsky.social Contract Research and Development Engineer, Image Processing. XC skier. Stockade-athon 15 km Running Road Race Director. 
Guillaume Witz @guiwitz.bsky.social Curious scientist and classical music enthusiast. Currently Bioimage Analyst and Data Scientist at the Data Science Lab of the University of Bern. Previously @epfl, @harvard, @biozentrum
ilastik-team.bsky.social @ilastik-team.bsky.social Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
The Francis Crick Institute @crick.ac.uk We're the Crick, a biomedical research lab in London working to figure out how life works.
Home to more than 2,000 scientists and a free public exhibition space.
https://www.crick.ac.uk/