Daan Speth

@daanspeth.bsky.social

1736 Followers 1816 Following

Computational microbiologist. Senior scientist at @cemess.bsky.social, @univie.ac.at. Microbial ecology, mostly of nitrogen cycle microbes, and data driven physiology. Maintainer of the GlobDB genome database https://globdb.org

Marker gene phylogeny of ammonia oxidizing archaea genomes in the GlobDB annotated with their prevailing environmental categories
Example CUGO plot. See AASTK documentation (https://globdb.org/aastk) for details
Example PASR plot. See AASTK documentation (https://globdb.org/aastk) for details
Example CASM plot. See AASTK documentation (https://globdb.org/aastk) for details
prize winner Nils Ganzwohl with the ENC28 organizing committee
word cloud of pubmed abstracts with Daan Speth as a co-author. The words "bacteria", "anammox", and "methane" feature most prominently