Pau Badia i Mompel @paubadiam.bsky.social Postdoctoral researcher at @anshulkundaje.bsky.social Machine learning #ML, gene regulatory networks #GRN, single cell and spatial #omics.
Previously at @saezlab.bsky.social
Core developer of https://decoupler.readthedocs.io/ at @scverse.bsky.social
Severin @severin7.bsky.social Core Developer @scverse & Solutions Architect @NVIDIA
Fabian Theis @fabiantheis.bsky.social Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Francesca Finotello 🖥️🧬 @francescafinotello.bsky.social Assistant Professor leading the Computational Biomedicine Group at the University of Innsbruck • Data scientist at the Digital Science Center (DiSC) • Precision medicine and cancer immunotherapy • Mother 🧬🖥️
https://computationalbiomedicinegroup.github.io/
Gregor Sturm @grst.bsky.social Single Cell/Spatial. Cancer Immunology. Outdoor activities.
Core developer @scverse.bsky.social.
Working in Clinical Bioinformatics at Boehringer Ingelheim.
Formerly PhD student at Medical University of Innsbruck.
My private account.
github.com/grst
Adam Gayoso @adamgayoso.bsky.social Machine learning and biology. Research Scientist at Google DeepMind. adamgayoso.github.io. Views are my own.
Can Ergen @canergen.bsky.social single-cell genomics, spatial transcriptomics, T cell immunology, IBD
Mikaela Koutrouli @mkoutrouli.bsky.social Computing all things single-cell | Postdoc at Genentech @MarioniLab | Steering council at scverse.org
Lukas Heumos @lukasheumos.bsky.social Sr Solution Architect Genomics @NVIDIA | Co-founder @scverse | Postdoc at @theislab
Views and opinions expressed on this account are those of my own and do not represent those of my employer, NVIDIA.
Emma Dann @emmamarydann.bsky.social Postdoc fellow @ Stanford & Gladstone Institutes
Core team @scverse-team.bsky.social
Bringing the single-cell genomics in human complex trait genetics
https://emdann.github.io/
scverse @scverse.bsky.social Foundational tools for omics data (mostly in python).
Markus Meister @mameister4.bsky.social Neuroscientist. Long-form opinions at https://markusmeister.com.
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Mahesh Binzer-Panchal @arcane-mahesh.bsky.social Bioinformatician at the National Bioinformatics Infrastructure Sweden ( NBIS ) and SciLifeLab.
I focus on de novo genome assembly, and pipeline development. #ReproducibleResearch with #Nextflow and #Quarto.
#OpenScience
https://github.com/mahesh-panchal
Jacob Schreiber @jmschreiber91.bsky.social Studying genomics, machine learning, and fruit. My code is like our genomes -- most of it is junk.
Assistant Professor UMass Chan
Previously IMP Vienna, Stanford Genetics, UW CSE.
Gabriel Manzo @gabrielmanzo.bsky.social @PacBio. 🧬
Views are my own.
@inversion.bsky.social @inversion.bsky.social Genomics nerd.
Sowmya Parthiban @sowmyapartybun.bsky.social Ph.D. student, Biostatistics, @jhubiostat.bsky.social
she/her
Website: sparthib.github.io/blog
#rstats 📈 for genomics 🧬 💻
views are my own
Sebastian @slothseb.bsky.social
Elaina G @perilousunknown.bsky.social Bioinformatician at Viridos | Microbial Ecology | Functional and phylogenetic diversity one cell at a time
Li Song @mourisl.bsky.social 毛利元光. Assistant Prof at the Department of Biomedical Data Science at Dartmouth College. Research on bioinformatics, algorithms. Lab page: mourisl.github.io
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. 🎲♟️👾🎮 🎸 🧪 🧬 🖥 🦠🚀🏎️ he/him.
https://bioinformer.substack.com
Martin Blohmer @mblohmer.bsky.social MD/PhD Student at Charité | Studying cancer evolution at the Naxerova Lab of HMS Genetics
Brent Pedersen @brent-p.bsky.social dad
creativity in: genomics, bioinformatics and solving problems
languages: rust, nim, python, go, c, bash, awk, js
Ryan Mills @ryanemills.bsky.social Professor, University of Michigan. Scholar of genomes, reader of books (sci-fi, fantasy), player of games (board, video), and camper of forests.
Sammons Lab at UAlbany @sammons.bsky.social Associate Professor of Biology, transcription factor biology/gene regulation/genomics, thesammonslab.org, Albany, NY
Hamid Mohamadi @hmohamadi.bsky.social
Pierre Marijon @pierre-marijon.bsky.social Research engineer, #bioinformatics, #genomic, #assembly, #variantcalling he|him #BiInSci #dyslexic #disabled
https://pierre.marijon.fr/link.html
Karel Břinda @brinda.eu ‖ Permanent Researcher / INRIA Start. Faculty @ INRIA Rennes 🇫🇷 ‖
BioInfo/CompBio: algorithms, genomics, pathogens & rapid diagnostic of antibiotic resistance《 https://brinda.eu | https://github.com/karel-brinda 》
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Epigenome Sciences BDP Research Cluster @hopkinsepigenome.bsky.social Bloomberg Distinguished Professorship Cluster in Epigenome Sciences
Owen Maresh @graveolens.bsky.social Mathematics Sorceror (sensory alchemist) at the Arctangent Transpetroglyphics Algra Laboratory (ATAL), I transflarnx mathematics into living rainbows. http://owen.maresh.info https://github.com/graveolensa,
Psoepbe-Tlaxtlal; (an undreamt splendour?)
Laurel Joy Gabard-Durnam @laurelgd.bsky.social PINE Lab PI @ Northeastern, HAPPE EEG software creator, neuroscientist exploring how experiences shape brain & behavior development. Loves cheese. She/her
https://www.plasticityinneurodevelopmentlab.com/
https://github.com/PINE-Lab/HAPPE
Vikram Shivakumar @vikramshivakumar.bsky.social PhD Student @ JHU Langmead Lab
Reactome @reactome.org Reactome is an open source curated pathway database that provides pathway and network analysis tools for life science researchers.
John Greally @greally.bsky.social Using genomic information to improve medicine
Yilei Fu @yileifu.bsky.social Ph.D. Candidate @ Computer Science Department, Rice University
Sina Majidian @sinamajidian.bsky.social Hiring PhDs/Postdocs CGRLab.github.io | Assistant Professor, Data Science and AI division, Chalmers University | SciLifeLab | Formerly at JHU-Langmead, UNIL-Dessimoz, WUR
Matthew O'Meara @maom.bsky.social Assistant Professor at UMich with a focus on computational pharmacology (he/him)
Bohan Ni @bohanni.bsky.social PhD student in CompSci, Johns Hopkins University. I try to find rare and common variants with impacts on traits/health.
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Alison Feder @alisonfeder.bsky.social Rapid evolutionary dynamics in viruses, cancer and bacteria. Assistant professor at UW Genome Sciences and Freeman Hrabowski Scholar at HHMI. federlab.github.io
Phillip Compeau @phillipcompeau.bsky.social I came over here to shitpost.
Computational biology (teaching) professor
"Oh you're the guy who co-founded Rosalind" -- a few people, not many
Valentine Svensson @nxn.se Molecular cell biology and stats / ML, mostly scRNA-seq.
Principal Scientist at Tahoe Tx.
https://www.nxn.se/archive
Josh Weinstock @joshweinstock.bsky.social Assistant Professor in the Department of Human Genetics at Emory University. Statistical genetics and genomics + genetic epidemiology of somatic mosaicism.
weinstocklab.org
Lindsay K Pino @lindsaykpino.com #massspectrometry, #proteomics, and #bioinformatics | hiking and coffee | co-founder & CTO @talusbio | opinions my own
Shane McCarthy @mcshane.bsky.social Genome assembly at Wellcome Sanger Institute and University of Cambridge
Frank Harrell @f2harrell.bsky.social Professor of Biostatistics
Vanderbilt University School of Medicine
Consultant, clinical trials/drug development
https://hbiostat.org https://fharrell.com
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Dustin Cram @dustincram.bsky.social Bioinformatician at the National Research Council of Canada in Saskatoon, Saskatchewan, Canada.
Kate Michie @kmichie.bsky.social Interested in Structural Biology, deep learning, NextFlow, HPC, viruses, missense mutations archaea, bacteria, evolution & random quirks of nature. (Protein Cosmos feed 🧶🧬) Leads a research group & Structural biology Facility,UNSW Sydney. Opinions my own.
Sergey Aganezov @aganezov.bsky.social Senior Bioinformatics Scientist @ Oxford Nanopore Technologies ;
Algorithms, complexity, cancer ;
Opinions are my own
Harriet Dashnow @hdashnow.bsky.social Asst. Prof, CU Biomedical Informatics.
#RareDisease #Genomics #STRs #bioinformatics #WomenInSTEM. Parent. Aussie. she/her
Views my own.
https://dashnowlab.org/
Img by familydestinationsguide (CC-BY)
Carl T. Bergstrom @carlbergstrom.com Professor, UW Biology / Santa Fe Institute
I study how information flows in biology, science, and society.
Book: *Calling Bullshit*, http://tinyurl.com/fdcuvd7b
LLM course: https://thebullshitmachines.com
Corvids: https://tinyurl.com/mr2n5ymk
he/him
Xuebing Wu @xuebingwu.bsky.social Assistant Professor @Columbia University | Ribosome, translation, RNA, CRISPR, genomics | alum @MIT @WhiteheadInst @Tsinghua_Uni | #hiringNow
xuebingwu.github.io
Shaun Mahony @shaunmahony.bsky.social Studying gene regulation and transcription factor binding with machine learning. Assoc Prof at Penn State. 🇮🇪
Connor Horton @connorhorton.bsky.social PhD candidate in Collins Lab at Berkeley MCB, studying mechanism and evolution of transposable elements. Formerly Fordyce Lab @ Stanford and Park Lab @ Harvard. (he/him) 🧬🏳️🌈
Nicholas Mancuso @nmancuso.bsky.social Associate Professor at USC. Genetics/Stats/ML. Husband and father. GA➡️CA. He/him. Views are mine.
www.mancusolab.com
Eric Topol @erictopol.bsky.social physician-scientist, author, editor
https://www.scripps.edu/faculty/topol/
Ground Truths https://erictopol.substack.com
SUPER AGERS https://www.simonandschuster.com/books/Super-Agers/Eric-Topol/9781668067666
Rob Edwards @linsalrob.bsky.social Bioinformatician and microbiologist at Flinders University in Adelaide. @linsalrob on all your socials
markus @ibio.dev Computer Scientist with a passion for bioinformatics 💻🧬🧑🔬🧪. Postdoc Integrative Bioinformatics @LMU_Munich. Combining Networks and Single Cells.
Stephen Hwang @stephenhwang.bsky.social Debugging wet code 💻🧬
@XDBio, JHMI; Langmead Lab
John Belmont @jwbelmon.bsky.social #MD, #PhD | #Pediatrics | #Medical #Genetics | #Human #Genetics | #Cardiovascular | #Congenital | #Genome #Sequencing | #HealthEcon | #Causal #Inference
belmontgenetics.org
bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social
bioRxiv Cancer Bio @biorxiv-cancer.bsky.social
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social
bioRxiv Genomics @biorxiv-genomic.bsky.social
bioRxiv Pathology @biorxiv-pathology.bsky.social
Marijana Vujkovic @marijana.bsky.social assistant professor @upenn in population genetics of cardiometabolic traits https://vujkoviclab.com/
Matt Jones @mattjones.bsky.social Incoming Assistant Professor @ MIT Biology, Koch Institute, and Institute for Medical Engineering and Science. Single-cell advisor to Vevo Therapeutics. Lineage tracing & cancer evolution. Website: thejoneslaboratory.com
María José Castro Gómez @mjcastrogomez.bsky.social Neuroscience graduate student at McGill University
arxiv stat.ML @arxiv-stat-ml.bsky.social source: https://arxiv.org/rss/stat.ML
maintainer: @tmaehara.bsky.social
Maxwell Ramstead @mjdramstead.bsky.social Cofounder @noumenal-labs.bsky.social. Honorary Fellow at the UCL Queen Square Institute of Neurology. Free energy principle, active inference, Bayesian mechanics, artificial intelligence, phenomenology
Immunological Proteome Resource @immpres.bsky.social ImmPRes is an open access public resource created to provide an in-depth, high quality, quantitative map of the immune cell proteomes. Created by Alejandro Brenes @ajbrenes.com
http://immpres.co.uk/
Lasse Folkersen @folkersen.com CSO Nucleus Genomics
Genetics, polygenic risk scores. Previously at impute.me and Genome Center Denmark
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)- C Chris Jackson @cajackson.org Systems biology
Fritz Sedlazeck @sedlazeck.bsky.social
Sergey Koren @sergek.bsky.social Scientist at NHGRI/NIH. Mapping complete genomes, finished a couple, working on more 🐮🐟🐒. Posts are my own opinion.
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Nils Homer @nilshomer.com I write software for Biologists. Founder @fulcrumgenomics, Bioinformatician, Computer Scientist, Coder, Father of 2xGirls. Opinions are my own.- P Paul Medvedev @pashadag.bsky.social Algorithmic Bioinformatics Researcher and Teacher. Posts about research results and educational/mentorship topics (for details, see http://bit.ly/380vX22).
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:48 | 10k 37:40 | HM 1:27:43 | M 3:39:06
Saurabh Belsare @saurabhbelsare.bsky.social Senior Scientist, Bioinformatics at PacBio. Keen reader of most genres of books. Science enthusiast. Amateur student of Indian Classical Music.
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Jonathan Pritchard @jkpritch.bsky.social My lab at Stanford studies human population genetics and complex traits.
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Dr. Jean Fan @jef.works Associate prof comp biologist @JHUBME. Founder @cuSTEMized. Editor @PLOSCompBiol. Alum @HarvardDBMI @blairmagnet. Doing art like a science, science like an art.
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Roger D. Peng @rdpeng.org Professor of Statistics and Data Sciences UT Austin | Prev JHUBiostat | R Programming for Data Science | Simply Stats Blog | Not So Standard Deviations | The Effort Report
Eric Kernfeld @ekernf01.bsky.social Statistician and computational biologist; uw alum; jhu student. He/him. http://ekernf01.github.io
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Scott McGrath @smcgrath.phd Biomedical Informatics PhD • CITRIS Health @UC Berkeley • FAMIA • Focusing on Informatics and AI in medicine • Linfield U. Grad • Missoula MT
https://smcgrath.phd
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University 🇰🇷 | former Steinegger Lab @ SNU, Söding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
David A Knowles @davidaknowles.bsky.social machine learning and functional/statistical genetics. Associate Prof @Columbia and Core Faculty @nygenome. he/him/his. https://daklab.github.io/
Jeff Hammerbacher @hammer.blue Curious
Elana Fertig, PhD @fertiglab.bsky.social Inter-dimensional cancer biologist. Director of the @genomescience.bsky.social at @umbaltimore.bsky.social.