EMBL-EBI Training @training.ebi.embl.org Delivering world-class bioinformatics training in data-driven life sciences virtually and onsite at EMBL's European Bioinformatics Institute in Hinxton, UK.
www.ebi.ac.uk/training
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Dr Emma Hodcroft @firefoxx66.bsky.social Die Virenjรคgerin! ๐น๐งฌ!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of CoVariants.org, co-founder of @pathoplexus.org
I like ๐ & ๐ซ
@firefoxx66@mstdn.science
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Kat Holt @katholt.bsky.social Scientistโฆ pathogen genomics & antimicrobial resistance, computational biology & infectious disease epidemiology.
Co-Director LSHTM AMR Centre @lshtmamrcentre.bsky.social
holtlab.net | klebnet.org | typhoidgenomics.org | amr.lshtm.ac.uk
Duncan MacCannell @drm.bsky.social Molecular #epidemiology & #publichealth. Pathogen #genomics, #microbiology, #emerginginfections, #AMR, (bio)tech #biosurveillance and #opendata.
Personal account. Opinions/dad jokes are my own.
๐ฆ
Low productivity public sector employee.
๐ฌ๐ฆ ๐งฌ๐ฅ๏ธ๐๐ป๐ฉ๐ธ๐ฅช
Alan McNally @alanmcn1.bsky.social Head of the School of Infection, Inflammation & Immunology @ Uni Birmingham. Proud Scot. Oversaw a few Covid PCR tests
Kate Baker @ksbakes.bsky.social Prof @cambridgebiosci.bsky.social Connecting pathogen evolution with public health outcomes. #Shigella and #AMR enthusiast. Views own. http://gen.cam.ac.uk/baker-group also www.pdu.gen.cam.ac.uk also @pducambridge.bsky.social
Robert Petit @rpetit3.bsky.social Public health bacterial genomics, bioinformatic workflow development, and training. Bactopia (https://bactopia.github.io). @ Wyoming Public Health Laboratory
Peter van Heusden (he/him) ๐ฟ @pvanheus.bsky.social #bioinformatics at @SANBI_SA, building bioinformatics workflows for (Pan-)African PH. health & justice! married. @pvanheus@mstdn.science
Dutchscientist (the real one) @dutchscientist.bsky.social Microbiologist @ Vet School, genomics/pathogens. Views, compliments and rants are my own. ORCID: 0000-0003-0203-1305. Am trying to avoid getting politics in my mentions, science and cats OK!
Josh Quick @scalene.bsky.social UKRI Future Leaders Fellow, University of Birmingham
Matt Loose @minomatt.bsky.social Sequencing, adapting and exploring genomes.
https://linktr.ee/matt.loose
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. ๐ฒโ๏ธ๐พ๐ฎ ๐ธ ๐งช ๐งฌ ๐ฅ ๐ฆ ๐๐๏ธ he/him.
https://bioinformer.substack.com
Lee Katz @lskatz.github.io Co host of the Micro Binfie podcast
Finlay Maguire @finlaym.bsky.social Ast Prof CS+Epi at Dalhousie/Pathogenomics Bioinformatics Lead at Shared Hospital Lab (Sunnybrook): infectious disease genomic epidemiology (AMR/SC2/Zoonoses) & socially-focused collab data science (he/him)
Kai Blin @kblin.bsky.social Microbiology PhD, co-author of antiSMASH, Open Source geek, views are my own. @kblin@scholar.social
รine O'Toole @aineotoole.bsky.social Virus evolution, bioinformatics & phylogenetics. Researcher at University of Edinburgh. 
Simon Harris @simonrharris.bsky.social Senior Program Officer in the Genomic Epidemiology and Modelling team at The Bill & Melinda Gates Foundation. Pathogen genomics and bioinformatics.
John Lees @johnlees.bacpop.org Pathogen informatics and modelling http://bacpop.org
(Research group leader at EMBL-EBI - http://ebi.ac.uk/research/lees/)
Conor (Conchรบr) Meehan @conmeehan.bsky.social Researching WGS/Epi/Taxonomy of pathogenic mycobacteria and evo of microbiomes. Irish-born, Nottingham-working. Call me Conchรบr if you can pronounce it. He/They
https://www.ntu.ac.uk/staff-profiles/science-technology/conor-meehan
Alison Mather @alisonmather.bsky.social Epidemiology, microbial (meta)genomics, antimicrobial resistance, One Health, Professor of Microbial Genomic Epidemiology at Quadram Institute Bioscience & University of East Anglia.
Phil Ashton @flashton.bsky.social Genomic epidemiologist at the Centre for Genomic Pathogen Surveillance at Oxford. How can microbial genomics improve health in high infectious disease settings?
Colman O'Cathail @colmanoc.bsky.social ENA Project Lead & Product Owner โช@ebi.embl.orgโฌ | Bioinformatics services and infrastructure | @enasequence.bsky.social
Keith Jolley @kjolley.bsky.social Bioinformatician in the Department of Biology, University of Oxford.
Working on microbial genomics | Developer of @PubMLST.org and BIGSdb | https://orcid.org/0000-0002-0751-0287
Tom Connor @tomrconnor.bsky.social Public health genomics and big computers working in Wales. Parent of two small children. Gamer, foodie, geek. Also likes cats. Views my own.
Aldert Zomer @aldertzomer.bsky.social Associate Professor at Utrecht University, Infectious Diseases & Immunology. (meta)genomes, AMR, zoonotic pathogens. Cookie and cake connoisseur.
publications: https://scholar.google.com/citations?hl=nl&user=VHHhpoAAAAAJ&view_op=list_works&sortby=pubdate
Eva Heinz @evaheinz7.bsky.social Fighting mental health stigma and toxic research culture. Proud to support https://twloha.com/.
And when life gives you lemons, make a G&T.
She/Her 
Rob Kingsley @drrobkingsley.bsky.social Professor of Microbiology @uniofeastanglia and Group Leader @TheQuadram, Norwich, UK - genomics, AMR, host-pathogen interactions, phage, microbiome
Editor Communications Biology
Tim Dallman @tdallman.bsky.social Senior Technical Officer @WHO - Pathogen Genomics & Bioinformatics
Sandra Reuter @sandrareuter.bsky.social Microbiology/Bacterial Genomics by day. Infection prevention & control. Interested in CRE/CPE, AMR, plasmids, and transmissions of bugs in all sorts of settings. Would do lots of things for cake. Starting to enjoy running. Internationalist.
Freiburg/German
Inรชs Mendes @inesmendes.bsky.social Senior Bioinformatics Scientist @ Theiagen Genomics
PhD in Microbial Bioinformatics
Martin Hunt @martibartfast.bsky.social Bioinformatician
Ruth E. Timme @ruthtimme.bsky.social Public health scientist in pathogen genomic surveillance . twin mama . botanist by training . birder . (tweets are my own)
Boas van der Putten @boasvdp.bsky.social EUPHEM fellow/bioinformatician at RIVM, NL
Andries van Tonder @andriesvt.bsky.social Senior Teaching Associate/Research Associate in Genetics & Veterinary Medicine @ University of Cambridge
Jen Guthrie @jenlguthrie.bsky.social Assistant Prof @WesternU | Adjunct Scientist @PublicHealthON | Canada Research Chair in Pathogen Genomics and Bioinformatics | Epidemiology | TB | AMR | MRSA
@kevinlibuit.bsky.social @kevinlibuit.bsky.social 
Helena, PhD ๐ณ๏ธโโง๏ธ @hexylena.bsky.social postdoc in clinical genetics. bioinformagician casting the spells that make the servers work ๐ง๐ช
https://orcid.org/0000-0001-9760-8992
The sanctioned action is to Cut. Hunting the good stuff. Better living through harm reduction.
she/they/ โ โ
Wytamma @wytamma.bsky.social Enjoying the little things like antibodies, ion channels and pip installs - technical biologist building tools and studying diseases โค๏ธ๐ข 
Matthew Croxen @mcroxen.bsky.social public health ๐ฆ genomics | associate professor | personal account (opinions my own) | ๐ธโฝ๐ทโจ๏ธ๐ฅท he/him. ๐จ๐ฆ โ๐ฟโ๐พโ๐ฝ.
Natacha Couto @natachacouto.bsky.social Scientist, One Health, AMR, Genomics
Chris Kent @chris.primalscheme.com PhD student in the Quick Lab with @articnetwork.bsky.social
Jess Chen @drjesschen.bsky.social Mom, wife, birder, bike commuter, and microbial bioinformatician.
Geoff Winsor @glwinsor.bsky.social PhD candidate and database developer (bioinformatics, Pseudomonas Genome Database) at SFU. Exposome-microbiome interactions, data integration, bacterial genomics, genome annotation.
Andrea Telatin @telatin.bsky.social Head of bioinformatics at the Quadram Institute - https://github.com/telatin/
Mitchell Sullivan @mjsull.bsky.social Microbinfie
Theiagen Genomics @theiagen.bsky.social Transforming public health and infectious disease surveillance through the innovative implementation of #NGS and #bioinformatics technologies.
Sage Wright @sagewright.bsky.social Bioinformatics and cats
Meaghan Kall @kallmemeg.bsky.social Epidemiologist, public health trainee, mom, wife. Formerly @UKHSA. Disability advocate. Born ๐บ๐ธ Migrated ๐ฌ๐ง. ๐ณ๏ธโ๐ Personal account.
Kristian G. Andersen @kgandersen.bsky.social Infectious diseases & genomics. Immunologist in (voluntary) exile. Minimal sarcasm. Fierce HOA (Hater of Acronyms). Personal account - opinions expressed are my own and not those of my employer.
Theo Sanderson @theo.io researching viral pathogen genomics at @lshtm.bsky.social, building @pathoplexus.org | theo.io / sandersonlab.org
Cornelius Roemer @corneliusroemer.bsky.social Studying SARS-CoV-2 evolution @nextstrain @biozentrum
Studied Physics @Cambridge Uni, then learned about computers
Dr. Amy Lee @minisciencegirl.bsky.social Assistant Professor @ SFU MBB | Systems Biology of Host-Pathogen | Vaccinology | Neonatal Sepsis | Pathogen Genomics | Loves data, food & art.
Erin Young @erinyoung.bsky.social Public Health #Bioinformatician. Wants to sequence ALL THE THINGS. Personal account with alternative spellings and grammar structures. She/her
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Nabil-Fareed Alikhan @happykhan.mstdn.science.ap.brid.gy Admin for @mstdn.science. #bioinformatician. Interested in #microbiology and #genomics.
๐ bridged from โ https://mstdn.science/@happykhan, follow @ap.brid.gy to interact
Chaoran Chen @chaoranchen.de Scientific software engineer at ETH Zurich, founder of GenSpectrum.org, co-founder of Pathoplexus.org, always looking for recommendations for board games ๐ฒ and books ๐
Gerry Tonkin-Hill @gerrythill.bsky.social Group leader at Peter Mac & the Doherty Institute in Melbourne, Australia
microbial genomics, statistics, machine learning
Liz Batty @lizbatty.bsky.social Crisp-loving nerd and swim headphones influencer. Bioinformatician and molecular microbiologist focused on tropical diseases. Live in Bangkok, do a podcast, drink coffee, go to the beach.
Adam Witney @aawitney.bsky.social Reader in Bioinformatics. Interested in infectious diseases, bioinformatics and genomics
Danny Park @dannyjpark.bsky.social I use genomics to study the evolution and spread of human pathogens and lead pathogen genomic analytics at the Broad Institute.
Also: @dpark@mstdn.science
ORCID: 0000-0001-7226-7781
GitHub: dpark01
David Aanensen @daanensen.bsky.social genomics, public health, the web, epidemiology and all the bits in between.- K karinlag.bsky.social @karinlag.bsky.social
Dr. Kelly O. @drkfo.bsky.social Chief Scientist for Next-Generation Sequencing & Bioinformatics at The Utah Public Health Laboratory
๐ SEQUENCE ALL THE THINGS! ๐
I oversee all the sequencing and data analysis for infectious disease pathogens for the state. All opinions are my own!
Kelsey Florek @k-florek.net Infectious Disease Genomics and Data Scientist @ Wisconsin State Laboratory
#publichealth, #genomics, #infectiousdiseases, #openscience, #opendata
Personal account, art and opinions are my own.
Noah Hull @noahhullphd.bsky.social Global public health practitioner, all things NGS, bioinformatics, random ๐ถs, and, wastewater
๐: UWyo (BSc - MolB; PhD - infect disease epi; ScD [h.c.], and UAB MPH-Epi)
Mountain West located, but missing the ocean. Views, albeit bad ones, are my own
Sean Skunk-Cabbage (Chou-Puant) โ @moldybasil.bsky.social Distressed of Conscience
Biking, walking, and taking the bus in Providence Rhode Island | Dense housing advocate | I think about plywood boats and mushrooms he/him
Ask me about systematics or plant diseases
Olin Silander @osilander.bsky.social DNA
Andrew Rambaut (๐๐) @arambaut.bsky.social Virus evolution | genomic epidemiology| virus origins | phylogenetics | BEAST | ARTIC Network
University of Edinburgh
http://beast.community
http://artic.network
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Jessica Blair @jessicamablair.bsky.social Professor of Antimicrobial Resistance. Institute of Microbiology and Infection, University of Birmingham. Director University of Birmingham Doctoral School. Editor in Chief of npj Antimicrobials and Resistance. 
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University ๐จโ๐ป
Lab: https://genomeinformatics.github.io- M Meera Chand @meerac.bsky.social Infectious diseases, microbiology, virology, public health and particularly emerging infections & genomics @UKHSA
Luis Pedro Coelho @luispedrocoelho.bsky.social Content creator for Elsevier, NPG, and others
Microbiome researcher
Based in Brisbane
Marco Galardini @mgalactus.bsky.social Computational biologist with a taste for microbiology. Associate professor at Twincore, MHH and HZI
Wikipedia wanderer
Lab website: https://www.microbial-pangenomes-lab.org/
Chris Fields @cjfields.bsky.social Microbiologist turned computational biologist
Bioinformatics Core Director, HPCBio
Open Bioinformatics Foundation Board Member
#metagenomics #microbiome #pangenomics
#python #r (yeah yeah, and #bioperl)- A Angie Hinrichs @angieshinrichs.bsky.social Working on the UCSC Genome Browser since 2002, SARS-Cov-2 phylogenetics since 2020. Opinions my own not employer's. she/her
Fiona Brinkman @fionabrinkman.bsky.social Microbe-loving bioinformatics and genomics professor aiming to better control infectious diseases, and support health, in a sustainable way. Also a Mum.
Bede Constantinides @bede.im Research fellow at the University of Birmingham interested in infectious disease informatics. Also cycling, photography, active travel. https://bede.im
Nicole Wheeler @nwheeler443.bsky.social 
Sam Horsfield @samuelhorsfield.bsky.social Postdoc @ University of Neuchรขtel, Laboratory of Evolutionary Genetics ๐ฆ Working on methods to study pathogen evolution and epidemiology using pangenomics ๐งฌ https://samhorsfield96.github.io/my-website/ ๐
Peter Menzel @pmenzel.bsky.social Bioinformatics Scientist at Labor Berlin | Clinical Bioinfo | menzel.tech | github.com/pmenzel | โค๏ธ#rstats
Abraham Gihawi @abrahamgihawi.bsky.social UEA Research Fellow - Bioinformatics - Cancer (meta)genomics since 2017.
Opinions are mine alone.
Scott V. Nguyen @scottnguyen.bsky.social I study cells and love watching supercells. Senior biocurator at the ATCC.
Mat Beale @typemat12.bsky.social Microbial (meta)genomics researcher @sangerinstitute
interested in genomic epidemiology and evolutionary dynamics of STIs/NTDs/AMR in complex samples. Views my own.
https://www.sanger.ac.uk/person/beale-mathew/
Hall Lab @halllab.bsky.social Prof Lindsay Hallโs research group at University of Birmingham & Quadram Institute. Early life microbiota (we love Bifidobacterium!), and influence of diet, host and pathogens.
Segata Lab @cibiocm.bsky.social The Laboratory of Computational Metagenomics led by Nicola Segata
**We are hiring, get in touch if interested!**
http://segatalab.cibio.unitn.it/
Moderator @svetlanaup.bsky.social
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health ๐งฌ๐ฆ ๐
Associate Professor of Computer Science, Rice University ๐ฆ๐ป
Treangen Lab website: www.treangenlab.com
Ryan Wick @rrwick.bsky.social Bioinformatician at the Centre for Pathogen Genomics at the University of Melbourne
Verity Hill @viralverity.bsky.social Wellcome ECA Fellow at the Centre for Virus Research, University of Glasgow
Phylodynamics for public health
https://viralverity.github.io
She/her
Karel Bลinda @brinda.eu โ Permanent Researcher / INRIA Start. Faculty @ INRIA Rennes ๐ซ๐ท โ
BioInfo/CompBio: algorithms, genomics, pathogens & rapid diagnostic of antibiotic resistanceใ https://brinda.eu | https://github.com/karel-brinda ใ
Sebastian Bruchmann @doktorbasti.bsky.social Assistant Research Professor @ University of Cambridge / HLRI
Functional Genomics, AMR and Host Pathogen Interactions of Klebsiella pneumoniae and Pseudomonas aeruginosa
https://sebbruchmann.github.io/
Oliver Schwengers @oschwengers.bsky.social ๐ฆ ๐งฌ๐ฅ๏ธ Microbial bioinformatics PostDoc
@JLUGiessen, WGS bacteria, plasmids, software/pipeline developer, father of 2, husband, astrophotographer
Rebecca A. Gladstone @becctococcus.bsky.social Microbial population genomics | opportunistic pathogen ecology | AMR, vaccines, and prevention. I study why some bacterial lineages move from colonisation to disease. UiO. Often outdoors in Norway.
Langridge Lab @langridgelab.bsky.social Dr Gemma Langridge's bacterial niche adaptation lab group based @quadraminstitute.bsky.social
Gemma Langridge @gemma-langridge.bsky.social Microbiologist group leader (@langridgelab.bsky.social) at the Quadram Institute, mum to two, dark chocolate addict. She/her