Mathys Grapotte

@grapottem.bsky.social

38 Followers 52 Following

currently building a test bench for dl models in genomics at https://github.com/nf-core/deepmodeloptim. PostDoc at @ CRG Barcelona

A figure depicting on the right, the Zero shot human protein fitness prediction of Evo (spearmanR between log likelyhood and protein fitness) versus multiple other methods. On the left, a plot of evo perplexity against protein fitness prediction for various proteins (both e.coli and human). We can see on the plot that Evo perplexity is negatively correlated with zero shot protein fitness prediction power