Dr. Jean Fan @jef.works · Dec 22 Using simulated data, we demonstrate that STARIT can distinguish transcriptionally distinct cell-types and further separates cell states based on subcellular transcript localization, which conventional gene count analysis fails to capture.
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Using real osmFISH spatial transcriptomics data, we demonstrate how STARIT can identify comparable cell-types to conventional gene count clustering analysis, with analogous differential feature analysis to give comparable insights to differential expression analysis.