Dr. Jean Fan @jef.works · Dec 22 Using real bacterial-MERFISH spatial transcriptomics data, we demonstrate how STARIT can delineate rotational variation not distinguishable by conventional gene count analysis.
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Overall, we hope that STARIT will enhance the identification of novel cell-states by providing a structured framework to represent molecular resolution spatial transcriptomics data in a way that captures subcellular heterogeneity. Available as a Python package on GitHub: github.com/JEFworks-Lab...