Jochem Smit

@jhsmit.bsky.social

123 Followers 164 Following

Biophysics; protein dynamics/folding using smFRET and HDX-MS. https://jhsmit.org/

Map of hiking routes in the Belgian Ardennes, with markers and trails highlighting hikes.
screencast of a solara app in vscode where a users is defining hdx-ms metadata
5 tomato plants in pots on a balcony
A cube dangling from two springs
screen recording of a solara app featuring a MolViewSpec widget where the camera is being controlled with sliders.
illustration of a baby boy riding a rhino into the sunset
Screen recording of a protein annotation web application
Screen recording showing ipymolstar widget with click interactions in a solara app.
Screen recording showing two-way hovering and highlighting between a 3D and 1D representation of a protein
A screenshot of the solarafold result viewer showing SecA2:SecB4 complex with plddt residue colors
A screenshot of jupyter lab showing a code cell where a local .bcif file is loaded and passed to `PBDeMolstar`. The output is a 3D render of nCov spike protein.
Render of MBP cryoEM structure in ipymolstar with residues coloured by HDX-MS gibbs free energies