Jim Shaw

@jimshaw.bsky.social

1220 Followers 563 Following

Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT. I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics. https://jim-shaw-bluenote.github.io

The best read alignment (minimum divergence) against a species' 16S genes. Each dot = one species. Fecal 16S ONT sample.
Heterogeneous long-read sequences due to a mixture of sequences