Jeremie Kalfon 👨💻🧬🤖🚀 @jkobject.com · Nov 19 Interestingly, there is a possible standard for it! 🎉AnnData contains the .varp field which is made to store var to var (e.g. genes to gene) relationships. However not many people use it… 4/6
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I thus decided to formalize it by creating GRnnData: First it is a tool to import and store many different network format to an AnnData. 💁 But it also contains more bells and whistles to work with gene networks! (like subsetting some genes, extracting targets, plotting 💹. 5/6