Carol Willing @willingc.bsky.social Python is forever🐍
Cracking Shells @crackingshells.bsky.social We build open-source infrastructure to package, share, and deploy #MCP servers for scientific applications.
🔗 GitHub: github.com/CrackingShells
🐣 Early-stage, hackathon-driven, and growing.
Roman Bushuiev @roman-bushuiev.bsky.social 🌏 https://roman-bushuiev.github.io/
Anton Bushuiev @anton-bushuiev.bsky.social PhD student at CTU Prague & IOCB Prague, machine learning for molecule discovery https://anton-bushuiev.github.io
Molecular Systems Biology @molsystbiol.org #OpenAccess @embopress.org journal publishing pioneering research in systems & synthetic biology, systems medicine
Olivier Grisel @ogrisel.bsky.social Software engineer at probabl, scikit-learn contributor.
Also at:
https://sigmoid.social/@ogrisel
https://github.com/ogrisel
Reactome @reactome.org Reactome is an open source curated pathway database that provides pathway and network analysis tools for life science researchers. 
Data Umbrella @dataumbrella.org ◈ community
◈ data science & open source
◈ videos: https://youtube.com/@dataumbrella
◈ events: https://meetup.com/data-umbrella
◈ news: dataumbrella.substack.com/
AI in the Biosciences (AIBIO UK) BBSRC Network @aibio-uk.bsky.social We are a BBSRC-funded network to support and enhance engagement between the Bioscience and AI communities in the UK. The network will support community events, funding of pilot projects and creation of resources for supporting use of AI in the biosciences
BRENDA Enzyme Database @brenda-enzymes.bsky.social BRENDA is the comprehensive electronic information resource that comprises molecular and biochemical information on enzymes.
Visit:
https://www.brenda-enzymes.org/
https://hub.dsmz.de/#/
The Francis Crick Institute @crick.ac.uk We're the Crick, a biomedical research lab in London working to figure out how life works.
Home to more than 2,000 scientists and a free public exhibition space.
https://www.crick.ac.uk/
Bluesky日本語（公式） @jp.bsky.app Bluesky日本語公式アカウントです（ユーザー名をチェック👆）。
バグのご報告、機能リクエスト、フィードバックはこちらへ → support@bsky.app
Acceleration Consortium @accelerationc.bsky.social We're a global community accelerating the discovery and design of wide range of new materials, from renewable energy to drugs. Led by Alán Aspuru-Guzik at the University of Toronto.
WikiPathways @wikipathways.fosstodon.org.ap.brid.gy WikiPathways is an open, public platform dedicated to the collection and curation of biological pathways by and for the scientific community
🌉 bridged from ⁂ https://fosstodon.org/@wikipathways, follow @ap.brid.gy to interact
Bio-protocol @bio-protocol.bsky.social Bio-protocol (www.bio-protocol.org) was founded in 2011 by a group of researchers at Stanford University with a singular mission: Improving research reproducibility by publishing high-quality protocols in the life sciences.
Marco Ruscone @drmarcoruscone.bsky.social 
Chris Mungall @cmungall.bsky.social Berkeley Lab, Environmental Genomics and Systems Biology division. #GeneOntology #MonarchInitiative #AllianceGenome #NationalMicrobiomeDataCollaborative #OBOFoundry.
Joel Nitta @joelnitta.com Associate Prof. at Chiba University, Japan. Father. Pteridologist. Outdoor Activist. Nikkei Yonsei. Posts mine.
https://www.joelnitta.com
foundingGIDE @gideproject.bsky.social Enabling biological and biomedical image data sharing by reaching consensus together with the global imaging community on metadata harmonization and ontology use
Phili @philouail.bsky.social A happy (and a bit stressed) PhD student, doing her best to navigate software development in R and having fun doing it.
Wanna learn LC-MS/MS analysis in R ? Click https://github.com/rformassspectrometry/Metabonaut 
MetaboLights @metabolights.bsky.social 
Christoph Elfmann @c-elfmann.bsky.social #IMPRS-GS PhD student in bioinformatics at the Jörg Stuelke lab of #UniGoettingen, currently working on #SubtiWiki's newest iteration
Angela Juhasz @angijuhasz.bsky.social Proteogenomics, computational biology, network biology, regulatory programs in seeds, food allergy, epitopes, bioactive peptides, edible grains. A/Prof at Edith Cowan University. 
Tomáš Pluskal @pluskal-lab.org Group Leader at the Institute of Organic Chemistry and Biochemistry (IOCB Prague @iocbprague.bsky.social). Plant biochemistry, metabolomics, genomics, bioML, etc. https://www.pluskal-lab.org
Yasin El Abiead @yelabiead.bsky.social Interested in metabolomics, metabolism, and how to get from the former to the latter
LIPID MAPS @lipidmaps.bsky.social Providing an internationally recognized nomenclature & classification system, open-access databases, informatics tools and educational lipidomics resources
GloBIAS @globias.bsky.social Global BioImage Analysts’ Society, a registered non-profit association. Join us to shape BioImage Analysis on a global level. www.globias.org
小川英幸 @hideyuki.bsky.social 経営者、プログラマー、Python
合同会社長目
Pythonインタラクティブデータビジュアライゼーション入門 朝倉書店
Pythonデータ分析ハンズオンセミナー 日経BP
The Carpentries @carpentries.carpentries.org The Carpentries: Software Carpentry, Data Carpentry and Library Carpentry. An open global community teaching the skills and perspectives to turn data into knowledge
Stephen Turner @stephenturner.us FIeld guide. Quartermaster. Associate Professor and Research Dean at UVA School of Data Science. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social Yearly Bioinformatics Open Source Conference since 2000, run by @OpenBio.
BOSC 2026 will be July 14-15, 2026, as part of ISMB 2026
(BOSC 2025 was July 21-22, 2025, in Liverpool, UK as part of ISMB/ECCB 2025)
https://www.open-bio.org/events/bosc/
Jan Broder Engler @jbengler.de Scientist and software developer. Creator of tidyplots.org and sepacode.app. Website jbengler.de.
Wishart Node @wishartnode.bsky.social The Wishart Node of TMIC has been advancing #metabolomics since 1999, offering accurate, customizable, and affordable services to make metabolomics matter.
pyOpenSci @pyopensci.org We build diverse communities that support free and open Python tools for processing scientific data. We also build technical skills needed to contribute to open source and that support open science. Join our global community: https://linktr.ee/pyopensci
Quansight @quansight.com Forging the bridge between enterprise innovation and open source sustainability.
ScaDS.AI Dresden/Leipzig @scadsai.bsky.social The Center for Scalable Data Analytics and Artificial Intelligence Dresden/Leipzig is an institutionalized national center of excellence for Artificial Intelligence.
👩👩👧👧 scads.ai/about-us/people/
💥 scads.ai/blog/
🧪 scads.ai/research/
Kristea Liu @kristi-liu.bsky.social Remote Sensing, GIS, Biodiversity data: GloBi, GBIF, iNaturalist, TDWG/SPNHC
地理学・生物多様性情報データ ・理科甲子園
UCSB Library and Cheadle Center
www.protocols.io @protocolsio.bsky.social A secure platform for developing and sharing reproducible methods.
Robert Castelo @robertclab.bsky.social Associate Professsor @upf.edu. Computational genomics R/Bioc developer. Innate curiosity. Views my own. He/him, vi/vim. Mastodon: @robertclab@genomic.social. Twitter: @robertclab
Angelique Trusler @angeliquetrusler.carpentries.org Associate Director of Community, The Carpentries #openscience Avid traveller. Views my own.
🔷gihyo.jp @gihyo.jp https://gihyo.jp/ の掲載記事を取り上げていきます。
※IDにドットが含まれていることにご注意ください。
Pieter Dorrestein @pieterdorrestein.bsky.social I love molecules microbes make and mass spectrometry. I can spend hours looking at MS/MS with the dream we can annotate every molecule.
Hadley Wickham @hadley.nz R, data, 🐕, 🍸, 🌈. He/him.
Icy @icybioimaging.bsky.social Icy is an #opensource #BioImageAnalysis software to visualize, annotate and quantify bioimaging data.
Get started: https://icy.bioimageanalysis.org/trainings/
Learn more: https://icy.bioimageanalysis.org/
@InstitutPasteur
Jeroen Ooms @jeroenooms.bsky.social Staff research engineer at @ropensci, member of tidyverse team, member of R consortium ISC, and project lead of https://r-universe.dev
Tim Ebbels @tebbels.bsky.social Computational metabolomics | Data science | Multivariate statistics | Machine learning | NMR | Mass spectrometry
BioMassSpec @realbiomassspec.bsky.social Dietrich Volmer · Research in analytical chemistry, mass spec and metabolomics · Editor-in-Chief of Anal. Sci. Adv. & Rapid Commun. Mass Spectrom · Views are my own
Humboldt University · Berlin · 🇨🇦🇩🇪 · volmerlab.de
Florian Huber @me-datapoint.bsky.social Professor for data science at HSD, @zdd-hsd.bsky.social
| ML fan & critic | current research mostly #datascience, #machinelearning, #cheminformatics #dataviz #nlp | ✨ #openscience #openaccess #rse | living data point 🚲
Functional Metabolomics Lab @func-metabo-lab.bsky.social www.functional-metabolomics.com
Egon Willigh☮gen 🟥 @egonw.mastodon.social.ap.brid.gy Chem/Bio/Stats/SemWeb, the CDK, WikiPathways, TGX @ Maastricht University (these posts are personal) (he/him). Here particularly #opensource #openstandards and […]
🌉 bridged from ⁂ https://mastodon.social/@egonw, follow @ap.brid.gy to interact
Michael Witting @metabomichael.bsky.social Metabolomics and lipidomics addict... Scientist, sword fighter, martial artist...
Views are my own!
Lou Woodley (she/her) @louwoodley.bsky.social Founder and Director of CSCCE. I train, support & research scientific community managers - those building networks and collaborations in STEM. Happiest at the intersection of people, science and tech - with a book & a view of the mountains. #community
The CSCCE @thecscce.bsky.social The Center for Scientific Collaboration and Community Engagement (CSCCE) supports those building scientific communities. CSCCE.org
@aedinculhane.bsky.social @aedinculhane.bsky.social 
Robert Haase @haesleinhuepf.bsky.social Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine
Ming Tommy Tang @tommytang.bsky.social Director of bioinformatics at AstraZeneca. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
Grab my new book https://divingintogeneticsandgenomics.kit.com/wtdt_bioinformatics
Leo Lahti @antagomir.bsky.social Prof. in Data Science, Turku, Finland. Analysis and modeling of complex natural and social systems. Open X.
Henrik Bengtsson @henrikbengtsson.bsky.social CS/Math Stat/UCSF Assoc Prof
R Foundation/R Consortium
https://futureverse.org, https://mastodon.social/@henrikbengtsson
#RStats
Kasper D Hansen @kasperdhansen.bsky.social Professor @ JHU, statistical genomics, www.hansenlab.org
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Federico Marini @federicomarini.bsky.social Head of the Bioinformatics Group at the Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI) @UnimedizinMainz
🇮🇹 in 🇩🇪, father of three, loves 💻🧬🩸☀️🍹🌲🏖️ and saying "it depends". He/him
https://federicomarini.github.io
BF Francis Ouellette @bffo.bsky.social Bioinformatics 🧬🖥️🧪
#DATABASE OUP Editor-in-Chief;
#PLOS Comp Biol Education Sect. Editor;
#OpenScience #OpenAccess #OpenData;
friend of @jxtxfoundation.bsky.social,
@abinstitute.bsky.social, @mon-bug.bsky.social
- I am 🇨🇦
Sarah E Hancock @sarahehancock.bsky.social She/her. Researcher at Victor Chang Cardiac Research Institute using #massspec to uncover the secrets of cell metabolism. #TeamMassSpec #lipidomics #metabolomics #FemalesinMS. Also the person who found meth in the Sydney Fatbergs.
Treasurer for #ANZSMS
Matt Paul @sciencematt.bsky.social Bioinformatics Analyst at Rockefeller University
Working on all the fun genomics | Training and Reproducibility
Lead Developer of Bioconductor package Herper for managing conda in R
https://www.bioconductor.org/packages/release/bioc/html/Herper.html
Ellis Patrick @ellispatrick.bsky.social Statistical Bioinformagician with interests in cytometry and precision medicine.
Associate Professor at the University of Sydney, Sydney Precision Data Science Centre, and Westmead Institute for Medical Research.
https://ellispatrick.github.io/
Matt Ritchie @mritchieau.bsky.social Lab Head in #bioinformatics developing #opensource #rstats #bioconductor packages for #singlecell #nanopore #rnaseq analysis, Melbourne, AU
Software & data: https://mritchielab.github.io
LinkedIn: https://www.linkedin.com/in/matthew-ritchie-5a468880
Bioconductor @bioconductor.bsky.social Bioconductor: Free, open-source software for rigorous, reproducible biological data analysis with R. Join our diverse community of developers and data scientists.
https://bioconductor.org/
Stevie Ped @smped.bsky.social 🇦🇺 They/Them. Biological data nerd & Bioconductor enthusiast. Intermittent musician.
Interested in Bioinformatics, Aboriginal Health, Covid Research, Transgender Rights & Politics.
Cannot read/send DMs due to local age verification laws
Stefano Mangiola @stemang.bsky.social Computational cancer-immunology and tumour microenvironment
@SAiGENCI and @WEHI_research, VCA fellow @VicGovDH
Jayaram Kancherla @jkanche.bsky.social Research Software Engineer. Develops bioinformatics tools and software: github.com/jkanche
Josh Moore @joshmoore.bsky.social Standardizing open bioimaging data infrastructure
Technical Director – @gerbi-gmb.de
Member & Co-Founder – @image.coop
TA1 Lead – @nfdi4bioimage.bsky.social
#OSS Maintainer for @openmicroscopy.org and @zarr.dev
Shila Ghazanfar @shazanfar.bsky.social 
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
🇲🇽 Leonardo Collado-Torres @lcolladotor.bsky.social #RStats @Bioconductor.bsky.social/🧠 genomics @lieberinstitute.bsky.social + Asst. Prof. @jhubiostat.bsky.social/@lcgunam @jtleek.bsky.social @aejaffe.bsky.social alumni/ @libdrstats.bsky.social @CDSBMexico.bsky.social
http://lcolladotor.github.io
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Justin J.J. van der Hooft @jjjvanderhooft.bsky.social Assistant Professor in Computational Metabolomics. Fascinated by the diverse chemistry of nature. Strives for Community-based solutions and Open Science.
Biswa Misra @biswamisra.bsky.social BiOmician #Delhite #Omics #Drugs |Alumni: @IITKgp @ETH_en @USMOfficial1969 @UF @txbiomed @wakehealth| Founding Fellow at Enveda
Steffen Neumann @sneumann.bsky.social Bioinformatics and Computational Metabolomics 
Levi Waldron @leviwaldron1.bsky.social Professor of Biostatistics at CUNY SPH, rstat / Bioconductor enthusiast, cancer genomics/metagenomics, proud HPV OSCC cancer survivor.
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Mingxun Wang @mingxunwang.bsky.social Assistant Professor @ UCR
Computational Mass Spectrometry, Bioinformatics.
#massspec #molecularnetworking #GNPS #MassQL
https://www.cs.ucr.edu/~mingxunw/
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup- N NBDC @nbdc.bsky.social 研究データをひろく、つなげて、つかいやすく。公募情報や講習会開催情報などをお届けします。
お問合せフォーム：https://form2.jst.go.jp/s/contact_nbdc
メルマガ配信中(月1回程度)：https://biosciencedbc.jp/about-us/public-relations/mail-magazine/
Federica Gazzelloni @fgazzelloni.bsky.social Synthetic Data & AI Training | AI Audit, Ethics & Explainability | Human–AI Systems
Founder @ DataMetricus | IHME GBD | Author 📘 amzn.to/4swdSDB
🤩👇🏻 Let's get connected! 👇🏻🤩
Janani Ravi @jananiravi.bsky.social Compbiologist 🧬🦠| PI JRaviLab |
Biomedical Informatics, CU Anschutz |
Founder, R-Ladies Aurora | AsiaR | R-Ladies East Lansing | Women+ Data Science
Javier Santoyo @jsantoyo.bsky.social Genomics & Bioinformatics #Omics #NGS #LongReads 🧪🧬 🖥️
Opinions my own. He/Him
LinkedIn: https://www.linkedin.com/in/javiersantoyolopez/
NPR @npr.org This is NPR 🎙️
Noam Ross @noamross.net Computational disease ecologist. Executive Director of @ropensci.org. Co-director and founder @grantwitness.org. Brooklynite. One Health, open science, democracy, #RStats, cities, civics, bikes, fun, love, progress + justice. he/him
Johannes Rainer @jorainer.bsky.social Computational Metabolomics, Open Software Development, Open and Reproducible Research, R, Emacs, Bioconductor, Mountains; also on https://fediscience.org/@jorainer
Mine Çetinkaya-Rundel @minecr.bsky.social she/her
professor at duke university + developer educator at posit
cat videos = instant smiles
https://mine-cr.com
https://fosstodon.org/@minecr
Keiichiro Ono @keiono.bsky.social 早期セミリタイアした科学系の可視化アプリケーション開発を専門とするプログラマ。2025年7月より自営業というか、ボランティアというか、そういう生き方を模索中。かつてはカリフォルニア州政府職員でした。
(ここから引っ越しました https://twitter.com/c_z )
#visualization #bioinformatics #dataviz
Emi Tanaka @emitanaka.org Statistical Data Artist & Scientist at Australian National University 🇳🇿 Interested in mixed models, experimental design, plant breeding 🌱, bioinfo 🧬, data vis 📊, statistical practice, ML/AI 👩🏻💻 Dabbles in UI, UX, front-end & #rstats 📦 dev
emitanaka.org
Peter Dalgaard @pdalgd.bsky.social Statistics in general, #rstats in particular (Core team member). Professor at CBS w/biostats background. Likes cooking and bicycling and socialising in general. Oh, and music: Opera, Jazz, ProgRock.
Michael Chirico @michaelchirico.bsky.social Data scientist, economist by training. Tooling makes the world go round. Word nerd.
Build more housing
Debian @debian.bsky.social The Universal Operating System; items posted automatically from https://micronews.debian.org and https://bits.debian.org.
https://www.debian.org
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
GitHub @github.com The AI-powered developer platform to build, scale, and deliver secure software.
Posit @posit.co We make free, open-source software for data scientists like the RStudio IDE.
We're formerly known as RStudio. You can always download our open-source IDE here. https://posit.co/download/rstudio-desktop/