Octavio Reyes-Matte @octavio-rm.bsky.social PhD student
Waterfowl appreciator 🦆🪿🦢
Bioimage analysis 🔬, Quantitative Biology📊 and Deep Learning 💻
Trying to understand the diversity of bacterial cell size and its evolution
From 🇨🇱 in 🇩🇪
he/him
Erick Ratamero @erickratamero.com Cross-posting from idlethumbs.social/@ratamero
half respectable professional (can you believe they let me manage data at EMBL?), half nerdy gremlin. views my own etc etc. he/him/ele
https://erickratamero.com
allen institute @alleninstitute.org accelerating science for a healthier world
Python Package Index @pypi.org The Python Package Index (PyPI) is the repository of software for the Python programming language. Pronounced 🥧 🫛 👁️
Dave Barry @david-j-barry.bsky.social BioImage Data Analysis at @crick.ac.uk: @crick-ia-team.bsky.social
Science → Reproducible as Data Analysis → Automated
Dubliner 🇮🇪 in London 🇬🇧 | Brunch sceptic | Trophy husband | Dissipator of masculine energy
ilastik-team.bsky.social @ilastik-team.bsky.social Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
Maizel lab @maizel-lab.org A fine group of plant biologists interested in morphogenesis and trying to get to the roots of things. Home base: Heidelberg University - https://www.cos.uni-heidelberg.de/en/research-groups/cell-and-developmental-biology.
Douglas Creager @dcreager.net Engineer at #Astral, working on Python tooling. Frozen pizza connoisseur. PL and program analysis dilettante. Unapologetically retro.
This is a 9 planet family, kids! ♇
🌐 https://dcreager.net/
🧭 Massachusetts
Charlie Marsh @crmarsh.com Building Astral: Ruff, uv, and other high-performance Python tools, written in Rust.
Siân Culley @superresolusian.bsky.social Still seeking M. Ulder for joint author paper.
Microscopes ✅ cats ✅ combining the two ❌
Lab --> https://www.kcl.ac.uk/research/culley-group
Kay Schneitz @kschneitz.bsky.social Plant developmental geneticist. Professor at TUM School of Life Sciences, Technical University of Munich. Views my own. He/him.
https://msl.ls.tum.de/plantdev
Helena Lucia Crowell @helucro.bsky.social Greek/American/German-ish in Spain.
Now PD in Barcelona. Prev PhD in Zurich.
community > monopolies. passion > prestige. creativity > recipes. analog > digital. music > all.
Luca Marconato @lucamarconato.bsky.social
Tim-Oliver Buchholz @tibuch.bsky.social Data Scientist at Novartis | bio-image analyst | he/him
Jan Eglinger @imagejan.bsky.social Image Analysis Expert at the Friedrich Miescher Institute for Biomedical Research (FMI), Basel (Switzerland) | bio-image analyst | (he/him)
Daniel Krentzel @danielkrentzel.bsky.social Hunting for new antibiotics with deep learning at @pasteur.fr 🧫 | Previously @crick.ac.uk and 🎓 @imperialcollegeldn.bsky.social
Kevin Yamauchi @kevinyamauchi.bsky.social building open source image analysis software for science
🔬 co-founder and member of @image.coop
🏝️ core developer @napari.org
https://kevinyamauchi.github.io/
Marvin Albert @m-albert.bsky.social Image Analysis and Data Management at the Department of Biosystems Science and Engineering of ETH Zürich in Basel
Constantin Pape @cppape.bsky.social Group leader @ Uni Göttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
Stephan Saalfeld @herrsaalfeld.bsky.social scalable data analysis, modeling, AI, software design at HHMI Janelia
https://mastodon.social/@herrsaalfeld
BIAUnit @biaunit.bsky.social The BioImage Analysis Unit designs innovative computational methods to address challenging biological questions through rigorous quantitative approaches @Icy_bioimaging.bsky.social
https://research.pasteur.fr/en/team/bioimage-analysis/
@InstitutPasteur
David Stansby @dstansby.bsky.social Research Software Engineer in bioimaging // I run the Human Organ Atlas (@humanorganatlas.bsky.social) // cyclist // walker
Jonas Windhager @jwindhager.bsky.social Bioimage Analyst / RSE at the SciLifeLab BioImage Informatics Unit
Johannes Soltwedel @jo-soltwedel.bsky.social Research software engineer @gerbi-gmb.de for all things #OME-ZARR, #NGFF, FAIR data.
Physicist, Python code-jockey, train enthusiast.
@retogerber.bsky.social @retogerber.bsky.social
Eric Perlman 🏳️🌈 @perlman.bsky.social Trains, planes & bicycles. Vegetarian food.
Portland, OR based after two decades in Baltimore.
Find me on Mastodon: @perlman@urbanists.social
Norman Rzepka @normanrz.com Co-Founder of scalable minds. Building WEBKNOSSOS, a tool visualizing, annotation, managing and sharing of large 3D images. Contributing to OME-Zarr.
he/him @normanrz@mastodon.social
Virginie Uhlmann @virginieuhlmann.bsky.social Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.
Joel Lüthi @joelluethi.bsky.social Head of Research and Development of the BioVisionCenter at the University of Zurich
Ruth Hornbachner @rhornb.bsky.social PhD @ Pelkmans lab, University of Zurich
Bioimage Analysis | Developmental Biology
Zarr @zarr.dev Chunked, Compressed, & Cloud-native N-dimensional arrays
See https://zarr.dev/ for more information.
Aafke Gros @aafkegros.bsky.social Check out Microscopy Nodes for handling microscopy data in Blender! Now loading .tif and OME-Zarr with big volume support :)
she/her | IPA: ˈafkə ɡrɔs
Josh Moore @joshmoore.bsky.social Standardizing open bioimaging data infrastructure
Technical Director – @gerbi-gmb.de
Member & Co-Founder – @image.coop
TA1 Lead – @nfdi4bioimage.bsky.social
#OSS Maintainer for @openmicroscopy.org and @zarr.dev
Bluesky @bsky.app official Bluesky account (check username👆)
Bugs, feature requests, feedback: support@bsky.app