Pathoplexus @pathoplexus.org An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
pathoplexus.org
Ant Underwood @bioinformantics.bsky.social Head of Bioinformatics at Broken String Biosciences.
https://www.brokenstringbio.com/
Still love microbial bioinformatics. Now working in the cell and gene therapy space. Keen Python and Nextflow coder
Ebenn @efosternyarko.bsky.social Microbial genomics & public health | proudly 🇬🇭
Sophien Kamoun @kamounlab.bsky.social Biologist @ The Sainsbury Lab; passionate about plant pathogens & evolution; open science advocate; loves travel, food and sports; nomad and hunter-gatherer. Web http://kamounlab.net | Medium https://medium.com/@kamounlab | GetGenome http://getgenome.net
Rob Edwards @linsalrob.bsky.social Bioinformatician and microbiologist at Flinders University in Adelaide. @linsalrob on all your socials
Tristan Caro @tacaro.bsky.social Microbiologist and geochemist | Postdoc @ Caltech | Formerly @ CU Boulder, NASA, Berkeley | Enjoys isotopes, dataviz, ceramics
Vivek Mutalik @vivekmutalik.bsky.social Dad, Teacher, Artist, Gardener and Scientist.
Change is the only permanent thing in the world. This moment will pass. It has to.
Ps.
All I post is my personal opinion
Mike the Mad Biologist and PM of the "Islamic Republic of Japan" @mikethemadbiol.bsky.social I'm a biologist, mad as in angry. Pro-D.C. statehood since 1969.
@mikethemadbiologist@mastodon.online
www.mikethemadbiologist.com
🧪
James Marsh @jmarsh.bsky.social Group Leader navigating microbiome genetics & engineering @ Max Planck in Tübingen, Germany. Rarely late.
☕️🎧🇦🇺🎥
Dr. Dawn Bowdish @msmacrophage.bsky.social Professor of Medicine, McMaster University
Executive Director of the Firestone Institute for Respiratory Health
Board of Directors Lung Health Foundation
#macrophages #aging #respiratoryinfections #vaccinations #immunity #inflammation #scicomm
Alejandro Montenegro @aemonten.bsky.social Molecular Biologist (aemonten.github.io) 丨Chief Editor @ CSH Protocols (cshprotocols.cshlp.org) 丨Head of the Integrity in Publishing Group at CSHL Press 丨Chair "Molecular Biosystems Conference" (molbiosystems.com) 丨(Oxford) Comma King 丨Central Dogma Police
Genome Research @genomeresearch.bsky.social A leading peer-reviewed genomics journal. https://genome.cshlp.org
Submit: http://submit.genome.org
Charlotte Summers @charlottesummers.bsky.social Clinical academic
Views shared are mine alone.
Paul Hoskisson 🧫 🦠🐸 @paulhoskisson.bsky.social Professor of Molecular Microbiology, Fellow of the Royal Society of Edinburgh, Editor at Microbial Genomics & mBio, Scouse, interested in Streptomyces, Evolution, Antibiotics, AMR, microbiology, Phage, herpetology, Cricket, EvertonFC
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Mara Wilson @marawilson.bsky.social Writer, actor, audiobook narrator, notorious tryhard 
Çağrı Mert Bakırcı-Taylor @cmb.evrimagaci.org PhD (Evolutionary Robotics), Texas Tech.
📹 Host: https://youtube.com/evrimagaci (Turkish)
🧠 Editor-in-Chief: https://evrimagaci.org (Most visited Turkish scicomm website)
✒️ Columnist: Oksijen
✨ Featured in: Nature, Scientific American
Angie @angiekim.bsky.social ❤️🔥 are.na/angie-kim
Jay Patel @infotainment.bsky.social always read the comments
#HCI #PeerReview #SciPub
#toolsforthought #ResearchSynthesis
#OpenScience #MetaSci #FoSci
🔎 Research: peer review, evi synth
🧑🏫 Teaching: Stats, DataViz
🐢 UMD: College of Info
🌐 PhD Candidate: Info Studies / HCI + Data
🏝️ OASISlab
Cameron Thrash @jcamthrash.bsky.social Professor, USC Marine and Environmental Biology, microbe hunter. he/him. Not a bot. thethrashlab.com @the.thrash.lab
Jason Moore @moorejh.bsky.social Chair, Department of Computational Biomedicine at Cedars-Sinai Medical Center in Los Angeles. Director, Center for Artificial AI Research & Education. Agentic AI. Atari enthusiast. Retrocomputing. Maker.
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Stephen Turner @stephenturner.us Associate Professor and Research Dean at UVA School of Data Science, #Rstats enthusiast, dad, runner, guitar noise-maker. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Ewan Birney @ewanbirney.bsky.social Interim Director General EMBL. I have an insatiable love of biology. Consultant to ONT and Cantata (Dovetail)
Ian M. Mackay, PhD (he/him) 🦠🤧🧬📑🦟🧀 @mackayim.bsky.social forever virologist but not a working one. past researcher. PCR guy. past lab manager. husband. dad. reader. writer. fixer. bad typist. learner. australian.
#MasksWork
https://virologydownunder.com/
Michelle Wille @duckswabber.bsky.social Avian influenza & avian virome ecology | "Expert in Ducks" | (she/her) | michellewille.com
Thomas Lin Pedersen @thomasp85.com Visualisation and graphics @posit.co
Classic Generative Art Weirdo using 🖤 and R: http://thomaslinpedersen.art and http://deca.art/thomasp85
he/him
Albert Vilella, PhD. @albertvilella.bsky.social Bioinformatics Scientist / Next Generation Sequencing, Single Cell and Spatial Biology, Next Generation Proteomics, Liquid Biopsy, SynBio, AI/ML in biotech // http://albertvilella.substack.com
Alexander Tin @alexander-a-tin.bsky.social Reported for CBS News in D.C. on federal public health. Raised in sunny Nevada. Decided to move overseas to be near family.
Michael Eisen @mbeisen.bsky.social Nematode antagonist
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Maryn McKenna @marynmck.bsky.social Journalist. Contributing Ed, Scientific American. Senior Fellow, Emory Univ Center for the Study of Human Health. Books: BIG CHICKEN, SUPERBUG, BEATING BACK THE DEVIL. Stories: https://authory.com/marynmckenna. Location: points on the 44th parallel.
Elisabeth Bik @elisabethbik.bsky.social Science integrity consultant and crowdfunded volunteer, PhD.
Ex-Stanford University. Maddox Prize/Einstein F Award winner
NL/USA/SFO.
#ImageForensics
@MicrobiomDigest on X.
Blog: ScienceIntegrityDigest.com
Support me: https://www.patreon.com/elisabethbik
Carl T. Bergstrom @carlbergstrom.com Professor, UW Biology / Santa Fe Institute
I study how information flows in biology, science, and society.
Book: *Calling Bullshit*, http://tinyurl.com/fdcuvd7b
LLM course: https://thebullshitmachines.com
Corvids: https://tinyurl.com/mr2n5ymk
he/him
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Dr Emma Hodcroft @firefoxx66.bsky.social Die Virenjägerin! 🏹🧬!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of CoVariants.org, co-founder of @pathoplexus.org
I like 🐈 & 🛫
@firefoxx66@mstdn.science
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Kat Holt @katholt.bsky.social Scientist… pathogen genomics & antimicrobial resistance, computational biology & infectious disease epidemiology.
Co-Director LSHTM AMR Centre @lshtmamrcentre.bsky.social
holtlab.net | klebnet.org | typhoidgenomics.org | amr.lshtm.ac.uk
Duncan MacCannell @drm.bsky.social Molecular #epidemiology & #publichealth. Pathogen #genomics, #microbiology, #emerginginfections, #AMR, (bio)tech #biosurveillance and #opendata.
Personal account. Opinions/dad jokes are my own.
🦅 Low productivity public sector employee.
🔬🦠🧬🖥️💉🌻🍩🐸🥪
Alan McNally @alanmcn1.bsky.social Head of the School of Infection, Inflammation & Immunology @ Uni Birmingham. Proud Scot. Oversaw a few Covid PCR tests
Kate Baker @ksbakes.bsky.social Prof @cambridgebiosci.bsky.social Connecting pathogen evolution with public health outcomes. #Shigella and #AMR enthusiast. Views own. http://gen.cam.ac.uk/baker-group also www.pdu.gen.cam.ac.uk also @pducambridge.bsky.social
Robert Petit @rpetit3.bsky.social Public health bacterial genomics, bioinformatic workflow development, and training. Bactopia (https://bactopia.github.io). @ Wyoming Public Health Laboratory
Peter van Heusden (he/him) 🗿 @pvanheus.bsky.social #bioinformatics at @SANBI_SA, building bioinformatics workflows for (Pan-)African PH. health & justice! married. @pvanheus@mstdn.science
Dutchscientist (the real one) @dutchscientist.bsky.social Microbiologist @ Vet School, genomics/pathogens. Views, compliments and rants are my own. ORCID: 0000-0003-0203-1305. Am trying to avoid getting politics in my mentions, science and cats OK!
Josh Quick @scalene.bsky.social UKRI Future Leaders Fellow, University of Birmingham
Matt Loose @minomatt.bsky.social Sequencing, adapting and exploring genomes.
https://linktr.ee/matt.loose
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. 🎲♟️👾🎮 🎸 🧪 🧬 🖥 🦠🚀🏎️ he/him.
https://bioinformer.substack.com
Lee Katz @lskatz.github.io Co host of the Micro Binfie podcast
Finlay Maguire @finlaym.bsky.social Ast Prof CS+Epi at Dalhousie/Pathogenomics Bioinformatics Lead at Shared Hospital Lab (Sunnybrook): infectious disease genomic epidemiology (AMR/SC2/Zoonoses) & socially-focused collab data science (he/him)
Kai Blin @kblin.bsky.social Microbiology PhD, co-author of antiSMASH, Open Source geek, views are my own. @kblin@scholar.social
Áine O'Toole @aineotoole.bsky.social Virus evolution, bioinformatics & phylogenetics. Researcher at University of Edinburgh. 
Simon Harris @simonrharris.bsky.social Senior Program Officer in the Genomic Epidemiology and Modelling team at The Bill & Melinda Gates Foundation. Pathogen genomics and bioinformatics.
John Lees @johnlees.bacpop.org Pathogen informatics and modelling http://bacpop.org
(Research group leader at EMBL-EBI - http://ebi.ac.uk/research/lees/)
Conor (Conchúr) Meehan @conmeehan.bsky.social Researching WGS/Epi/Taxonomy of pathogenic mycobacteria and evo of microbiomes. Irish-born, Nottingham-working. Call me Conchúr if you can pronounce it. He/They
https://www.ntu.ac.uk/staff-profiles/science-technology/conor-meehan
Alison Mather @alisonmather.bsky.social Epidemiology, microbial (meta)genomics, antimicrobial resistance, One Health, Professor of Microbial Genomic Epidemiology at Quadram Institute Bioscience & University of East Anglia.
Phil Ashton @flashton.bsky.social Genomic epidemiologist at the Centre for Genomic Pathogen Surveillance at Oxford. How can microbial genomics improve health in high infectious disease settings?
Colman O'Cathail @colmanoc.bsky.social ENA Project Lead & Product Owner @ebi.embl.org | Bioinformatics services and infrastructure | @enasequence.bsky.social
Keith Jolley @kjolley.bsky.social Bioinformatician in the Department of Biology, University of Oxford.
Working on microbial genomics | Developer of @PubMLST.org and BIGSdb | https://orcid.org/0000-0002-0751-0287
Tom Connor @tomrconnor.bsky.social Public health genomics and big computers working in Wales. Parent of two small children. Gamer, foodie, geek. Also likes cats. Views my own.
Aldert Zomer @aldertzomer.bsky.social Associate Professor at Utrecht University, Infectious Diseases & Immunology. (meta)genomes, AMR, zoonotic pathogens. Cookie and cake connoisseur.
publications: https://scholar.google.com/citations?hl=nl&user=VHHhpoAAAAAJ&view_op=list_works&sortby=pubdate
Eva Heinz @evaheinz7.bsky.social Fighting mental health stigma and toxic research culture. Proud to support https://twloha.com/.
And when life gives you lemons, make a G&T.
She/Her 
Rob Kingsley @drrobkingsley.bsky.social Professor of Microbiology @uniofeastanglia and Group Leader @TheQuadram, Norwich, UK - genomics, AMR, host-pathogen interactions, phage, microbiome
Editor Communications Biology
Tim Dallman @tdallman.bsky.social Senior Technical Officer @WHO - Pathogen Genomics & Bioinformatics
Sandra Reuter @sandrareuter.bsky.social Microbiology/Bacterial Genomics by day. Infection prevention & control. Interested in CRE/CPE, AMR, plasmids, and transmissions of bugs in all sorts of settings. Would do lots of things for cake. Starting to enjoy running. Internationalist.
Freiburg/German
Inês Mendes @inesmendes.bsky.social Senior Bioinformatics Scientist @ Theiagen Genomics
PhD in Microbial Bioinformatics
Martin Hunt @martibartfast.bsky.social Bioinformatician
Ruth E. Timme @ruthtimme.bsky.social Public health scientist in pathogen genomic surveillance . twin mama . botanist by training . birder . (tweets are my own)
Boas van der Putten @boasvdp.bsky.social EUPHEM fellow/bioinformatician at RIVM, NL
Andries van Tonder @andriesvt.bsky.social Senior Teaching Associate/Research Associate in Genetics & Veterinary Medicine @ University of Cambridge
Jen Guthrie @jenlguthrie.bsky.social Assistant Prof @WesternU | Adjunct Scientist @PublicHealthON | Canada Research Chair in Pathogen Genomics and Bioinformatics | Epidemiology | TB | AMR | MRSA
Helena, PhD @hexylena.bsky.social postdoc in clinical genetics. bioinformagician casting the spells that make the servers work 🧙🪄
https://orcid.org/0000-0001-9760-8992
Failure is not an option.
Better living through harm reduction.
Stable like RDX.
she/they/▒▒
Wytamma @wytamma.bsky.social Enjoying the little things like antibodies, ion channels and pip installs - technical biologist building tools and studying diseases ❤️🐢 
Matthew Croxen @mcroxen.bsky.social public health 🦠 genomics | associate professor | personal account (opinions my own) | 🎸⚽📷♨️🥷 he/him. 🇨🇦 ✊🏿✊🏾✊🏽.
Natacha Couto @natachacouto.bsky.social Scientist, One Health, AMR, Genomics
Chris Kent @chris.primalscheme.com PhD student in the Quick Lab with @articnetwork.bsky.social
Jess Chen @drjesschen.bsky.social Mom, wife, birder, bike commuter, and microbial bioinformatician.
Geoff Winsor @glwinsor.bsky.social PhD candidate and database developer (bioinformatics, Pseudomonas Genome Database) at SFU. Exposome-microbiome interactions, data integration, bacterial genomics, genome annotation.
Andrea Telatin @telatin.bsky.social Head of bioinformatics at the Quadram Institute - https://github.com/telatin/
Mitchell Sullivan @mjsull.bsky.social Microbinfie
Sage Wright @sagewright.bsky.social Bioinformatics and cats
Meaghan Kall @kallmemeg.bsky.social Epidemiologist, public health trainee, mom, wife. Formerly @UKHSA. Disability advocate. Born 🇺🇸 Migrated 🇬🇧. 🏳️🌈 Personal account.
Kristian G. Andersen @kgandersen.bsky.social Infectious diseases & genomics. Immunologist in (voluntary) exile. Minimal sarcasm. Fierce HOA (Hater of Acronyms). Personal account - opinions expressed are my own and not those of my employer.
Theo Sanderson @theo.io researching viral pathogen genomics at @lshtm.bsky.social, building @pathoplexus.org | theo.io / sandersonlab.org
Cornelius Roemer @corneliusroemer.bsky.social Studying SARS-CoV-2 evolution @nextstrain @biozentrum
Studied Physics @Cambridge Uni, then learned about computers
Dr. Amy Lee @minisciencegirl.bsky.social Assistant Professor @ SFU MBB | Systems Biology of Host-Pathogen | Vaccinology | Neonatal Sepsis | Pathogen Genomics | Loves data, food & art.
Erin Young @erinyoung.bsky.social Public Health #Bioinformatician. Wants to sequence ALL THE THINGS. Personal account with alternative spellings and grammar structures. She/her
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Nabil-Fareed Alikhan @happykhan.mstdn.science.ap.brid.gy Admin for @mstdn.science. #bioinformatician. Interested in #microbiology and #genomics.
🌉 bridged from ⁂ https://mstdn.science/@happykhan, follow @ap.brid.gy to interact
Chaoran Chen @chaoranchen.de Scientific software engineer at ETH Zurich, founder of GenSpectrum.org, co-founder of Pathoplexus.org, always looking for recommendations for board games 🎲 and books 📚
Gerry Tonkin-Hill @gerrythill.bsky.social Group leader at Peter Mac & the Doherty Institute in Melbourne, Australia
microbial genomics, statistics, machine learning
Liz Batty @lizbatty.bsky.social Crisp-loving nerd. Bioinformatician and molecular microbiologist focused on tropical diseases. Live in Bangkok, do a podcast, drink coffee, go to the beach.
Adam Witney @aawitney.bsky.social Reader in Bioinformatics. Interested in infectious diseases, bioinformatics and genomics
Danny Park @dannyjpark.bsky.social I use genomics to study the evolution and spread of human pathogens and lead pathogen genomic analytics at the Broad Institute.
Also: @dpark@mstdn.science
ORCID: 0000-0001-7226-7781
GitHub: dpark01
David Aanensen @daanensen.bsky.social genomics, public health, the web, epidemiology and all the bits in between.- K karinlag.bsky.social @karinlag.bsky.social
Dr. Kelly O. @drkfo.bsky.social Chief Scientist for Next-Generation Sequencing & Bioinformatics at The Utah Public Health Laboratory
🌟 SEQUENCE ALL THE THINGS! 🌟
I oversee all the sequencing and data analysis for infectious disease pathogens for the state. All opinions are my own!
Kelsey Florek @k-florek.net Infectious Disease Genomics and Data Scientist @ Wisconsin State Laboratory
#publichealth, #genomics, #infectiousdiseases, #openscience, #opendata
Personal account, art and opinions are my own.
Noah Hull @noahhullphd.bsky.social Global public health practitioner, all things NGS, bioinformatics, random 🐶s, and, wastewater
📜: UWyo (BSc - MolB; PhD - infect disease epi; ScD [h.c.], and UAB MPH-Epi)
Mountain West located, but missing the ocean. Views, albeit bad ones, are my own