Yan Basque @yanbasque.com · Apr 28 Wait a minute! Is that what people think happens in the last scene? She doesn’t doubt that it was science, she’s disappointed that her religious experience was ruined. She allowed herself to believe in the mysterious for the first time in her life and the Doctor burst her bubble. She’s heartbroken.
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It is a direct callback to what Chakotay told her happened to him when he was a kid in an earlier scene. I swear to god people are not paying attention.