CNRS @cnrs.fr Organisme public 🇫🇷 de recherche pluridisciplinaire, le Centre national de la recherche scientifique c'est 33 000 personnes qui font avancer la connaissance. #HelloESR
Centre for Genomic Pathogen Surveillance @thecgps.bsky.social We provide data, insight and tools for pathogen surveillance and AMR research. Based at the Pandemic Sciences Institute, University of Oxford, UK.
Sergi Arredondo-Alonso @arredondo.bsky.social Postdoc, Scientia Fellow at Jukka Corander's group (University of Oslo). Microbial and plasmid genomics! Main interests in bioinformatics, data science and everything in the middle.
John Lees @johnlees.bacpop.org Pathogen informatics and modelling http://bacpop.org
(Research group leader at EMBL-EBI - http://ebi.ac.uk/research/lees/)
Marco Galardini @mgalactus.bsky.social Computational biologist with a taste for microbiology. Associate professor at Twincore, MHH and HZI
Wikipedia wanderer
Lab website: https://www.microbial-pangenomes-lab.org/
Simon Harris @simonrharris.bsky.social Senior Program Officer in the Genomic Epidemiology and Modelling team at The Bill & Melinda Gates Foundation. Pathogen genomics and bioinformatics.
Jamie Hall @jpjhall.bsky.social microbiology // evolution // mobile genetic elements
🏫 University of Liverpool, UK
🦠 www.andthemicrobes.org
💻 www.jpjhall.net
Emma Griffiths @griffiemma.bsky.social
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Nicole Wheeler @nwheeler443.bsky.social
Lauren Cowley @laurencowley.bsky.social Senior Lecturer in Microbial Genomics and Bioinformatics at Milner Centre for Evolution, University of Bath
Marco Molari @mmolari.bsky.social PostDoc @ Biozentrum - Basel in the group of Richard Neher
Interested in microbial genomics, pangenome graphs & evolution 🧬🦠💻
Charles Coluzzi @charlescoluzzi.bsky.social Junior professor in The Biometrics and Evolutionary Biology Laboratory - I’m still fascinated by mobile pieces of DNA
#Plasmids #AMR #Evolution
Rayan Chikhi @rayanchikhi.bsky.social
Sam Lipworth @samlipworth.bsky.social Clinical Lecturer and ID/Micro registrar in Oxford
Microbiology Society @microbiologysociety.org Microbiology Society: A world in which the science of #microbiology provides maximum benefit to society | microbiologysociety.org
lnk.bio/microbiosoc
Erkison Odih @erkison.bsky.social Bioinformatics Research Fellow @ Holt Lab, LSHTM
Kevin Debatisse @kdebatisse.bsky.social Postdoctoral researcher - Institut Pasteur - Team "Bacterial Genome Plasticity" - Mazel's Lab -Molecular microbiology - HGT - MGE - DNA recombination.
Francois Lebreton @flebreton.bsky.social Director of bioinformatics at WRAIR-MRSN. Interests in microbial genomics, antimicrobial resistance and bacterial evolution.
Armen Ovsepian @armovse.bsky.social Postdoctoral researcher at Institut Pasteur | Bioinformatics | Bacterial genomics | Antimicrobial resistance | metagenomics
EMBL-EBI Training @training.ebi.embl.org Delivering world-class bioinformatics training in data-driven life sciences virtually and onsite at EMBL's European Bioinformatics Institute in Hinxton, UK.
www.ebi.ac.uk/training
Sebastian Duchene @sebduchene.bsky.social 🦠🧬💻
Researcher in infectious disease evolution
Group leader at Instiut Pasteur, Paris
https://research.pasteur.fr/en/member/sebastian-duchene-garzon/
Keen swimmer 🏊🏼♂️, runner 👟, and beach lover 🌊🤿🏖️
Views are my own
PubMLST.org @pubmlst.org Public databases for molecular typing and microbial genome diversity. https://pubmlst.org
Pathogenwatch @pathogenwatch.bsky.social A global platform for genomic pathogen surveillance. Developed by the Centre for Genomic Pathogen Surveillance, University of Oxford, UK.
Xavier Didelot @xavierdidelot.bsky.social Professor of Statistical Epidemiology and Genomics at University of Warwick
Danielle Ingle @danielleingle.bsky.social Research Fellow at the University of Melbourne
enteric bacteria, evolutionary dynamics, antimicrobial resistance, genomic epidemiology
Margaret Lam @margaretlam.bsky.social Research Fellow at Monash University - microbial genomics, Klebsiella, Acinetobacter, plasmids
Sebastian Bruchmann @doktorbasti.bsky.social Assistant Research Professor @ University of Cambridge / HLRI
Functional Genomics, AMR and Host Pathogen Interactions of Klebsiella pneumoniae and Pseudomonas aeruginosa
https://sebbruchmann.github.io/
Julian Parkhill @julianparkhill.bsky.social Researcher in pathogen genomics and evolution
University of Cambridge Vet School @camvetschool.bsky.social
https://pathgenevocam.github.io
KlebNET-GSP @klebnet.bsky.social Supporting genomic surveillance of Klebsiella bacteria thru software tools, resources, and building a global community.
klebnet.org | github.com/klebgenomics | pathogen.watch | bigsdb.pasteur.fr
Bruno Gonzalez Zorn @bgzorn.bsky.social Antimicrobial Resistance Unit, Head
Prof. at Complutense University of Madrid
David Aanensen @daanensen.bsky.social genomics, public health, the web, epidemiology and all the bits in between.
André Carvalho @afpcarvalho.bsky.social Scientist interested in microbiology, antimicrobial resistance, integrons and bacterial adaptation. Postdoc at ucm.es/mbalab
@anafreitasprt.bsky.social @anafreitasprt.bsky.social
Carolina Nodari @carolina-nodari.org Deputy director of the French NRC for E. coli, Shigella and Salmonella at @pasteur.fr. Interested in all things #AMR and #foodborne_pathogens.
Jane Hawkey @yekwah.bsky.social Microbial genomics - bacterial evolution, AMR, mobile elements, phylogenetics. Located at Monash University/Alfred Hospital
PLOS Biology @plosbiology.org A leading life science journal that champions inclusive, high-impact research across all disciplines—from molecules to ecosystems. We offer innovative formats and collaborative editorial support to ensure your work achieves its full scientific impact.
Jesse Shapiro @bjesseshapiro.bsky.social Macrobe qui aime les microbes
http://www.shapirolab.ca/
Julien Guglielmini @julmini.bsky.social Bioinformatician at Institut Pasteur. Evolution, Microbial genomics, Computational biology, Phylogenetics.
Rebecca J Hall @drrebeccajhall.bsky.social Royal Society University Research Fellow | University of Manchester | Evolution, symbiosis, metabolism
Norman Fry, PhD @normfry.bsky.social Rtd Clin Sci UKHSA #PublicHealth #microbiologist #vaccines #diphtheria #pertussis #pneumo Ex-coEiC J Med Microbiol (MicroSoc) Now Co-editor & Director Stretton Focus, Country Escapee #DIY #veg #birds #walking #flautist #Shropshire #QuizzyMonday 💙
Marta Lourenço @martalourenco21.bsky.social Microbiologist |microbial ecology | microbiome | phage-bacteria interactions
Phages rule the world👀
Postdoc at Evolutionary Biology lab with Isabel Gordo
Gulbenkian Institute for Molecular Medicine - Oeiras
Postdoc Junior Leader Fellow #BecariosFLC
Julie Le Bris @julielebris.bsky.social PhD student interested in microbial evolution and ecology🧬 @Institut Pasteur
#Klebsiella #MicroSky- E @ESGEM_ESCMID @esgem-sg.bsky.social ESCMID Study Group on Epidemiological Markers
crodrigues87.bsky.social @crodrigues87.bsky.social Deputy Director of the French NRC for whooping cough and other Bordetella infections at Institut Pasteur | Bacterial genomics | Public Health | Evolution, and population structure of bacterial populations | AMR and vaccine-escape | Klebsiella | Bordetella
Helena Martini @helenamartini.bsky.social Molecular biologist at the University Hospital Brussels laboratory of microbiology, with a special focus on toxigenic corynebacteria and B. pertussis.
Simon Cauchemez @scauchemez.bsky.social Professor of infectious disease epidemiology and modelling at Institut Pasteur, Paris. Transmission, epidemic dynamics and forecasting, seroepidemiology, vaccines and NPIs, respiratory and vector born diseases, zoonoses, Public Health. #IDSky
David Bikard @dbikard.bsky.social Bacterial Immunity and Synthetic Biology enthusiast. Head of Lab at Institut Pasteur. Co-Founder of Eligo Bioscience.
EURL-PH-DIPE @eurl-ph-dipe.bsky.social EURL-PH-DIPE is an EU funded nonprofitable project. The main objective of EURL-PH-DIPE is to support ECDC and the national reference laboratories to tackle diphtheria and pertussis in Europe.
Manuel Ares-Arroyo @aresarroyom.bsky.social Ramón y Cajal Fellow | Head of Biology of Mobile Genetic Elements Unit | Fisabio Foundation | Plasmids, MGEs, AMR, bacteria evolution
Michael Lairmore DVM, PhD @lairvet.bsky.social Member National Academy of Medicine, Distinguished Professor (Emeritus), University of California, Davis. Leader, Author, One Health Advocate, Scientist, and Consultant.
João Pires @microbialtracker.bsky.social MSc Pharm, PhD | ECDC Fellow alumni Health Microbiology (EUPHEM) | AMR | Integrated Surveillance | Capacity Building | Language kabelsalat | Photography enthusiast
@nickibenson.bsky.social @nickibenson.bsky.social
Kirstyn Brunker @kirstynbrunker.bsky.social Research Fellow at University of Glasgow. Pathogen genomics for planetary health | genomic surveillance |phylogenetics | nanopore
Kara @karatsang.bsky.social bacterial genomics・antibiotic resistance https://klebnet.org
Maude Jacquot @maudejacquot.bsky.social Researcher | Molecular epidemiology & evolution | Disease ecology | Transmission dynamics & spatial epidemiology | Molluscs
Jose F. Delgado-Blas @josefdelgadoblas.bsky.social Postdoc researcher at Institut Pasteur | Bacterial genomics | Evolution, ecology and diversity of bacterial populations
Sophia David @sophia-david.bsky.social Mum to 👦🏻👶🏻. Senior Research Fellow at the Centre for Genomic Pathogen Surveillance, University of Oxford. Bacterial genomes and AMR 🧬 🦠 Love running and the outdoors 🏃🏼♀️🌿
Kathrin Loosli @kathrinloosli.bsky.social Swiss girl living in Scottland 🏴🇨🇭| Evaluation & Epidemiology at UKHSA| #AMR & #OneHealth | Science, Public Health, Global Health, Climate, Nature | she/her | Views my own
Kasia M Parfitt @kasiamparfitt.bsky.social Senior Postdoc in the Oxford Vaccine Group (CoI-AI project) & Departmental Lecturer at the University of Oxford | Interests in microbial population biology & genomics | ECM Forum Co-Chair for Microbiology Society 🦠
Chloé Baum @chloebaum.bsky.social PhD in Molecular Biology and NGS specialist working at Biomics sequencing core facility of @institupasteur
Nanopore and microbiome lover.
Emma Doughty @emmadoughty.bsky.social Genomicist 🧬 at the intersection of bioinformatics 💻, epidemiology🫂 and global public health 🌍
Inserm @inserm.fr 🧬La science pour la santé
L’Institut national de la santé et de la recherche médicale (Inserm) est un établissement public dédié à la recherche biologique, médicale et à la santé humaine.
Notre site internet : https://www.inserm.fr/
INRAE_France @inrae-france.bsky.social Bienvenue sur le compte d'INRAE
Institut national de recherche pour l’agriculture, l’alimentation et l’environnement
Fondation Inria @fondation-inria.bsky.social [RE]Donner du sens au numérique
IRD @ird-fr.bsky.social Déployer la recherche - Partager la science - Transformer l'avenir
Cirad @cirad.bsky.social 🇫🇷 La #recherche agronomique pour le #développement 🇬🇧 French Agricultural #Research for #Development.
Ifremer 🌊 @ifremer.bsky.social Des abysses à la surface, de la côte au large
https://lnk.bio/Ifremer
PLOS One @plosone.org A global, inclusive community of researchers who believe rigorous research deserves to be discoverable, widely disseminated and freely accessible, working to advance science for the benefit of all.
Nature Reviews Genetics @natrevgenet.nature.com Publishing reviews and commentaries across the fields of genetics and genomics. Part of Springer Nature and Nature Portfolio.
https://www.nature.com/nrg/
Nature Genetics @natgenet.nature.com Nature Genetics is a monthly journal publishing high impact research in genetics and genomics. Part of @natureportfolio.bsky.social
Repost/like=interesting/relevant, not necessarily endorsement.
Nature Ecology & Evolution @natecoevo.nature.com Nature Ecology & Evolution publishes research and comment across the entire breadth of ecology and evolution, including both pure and applied topics. nature.com/natecolevol
Communications Biology @commsbio.nature.com An open-access @natureportfolio.bsky.social journal publishing high quality primary research, reviews and commentary in all areas of the biological sciences since 2018.
https://www.nature.com/commsbio/
il Post @ilpost.it L'account ufficiale del Post (ilpost.it)
EMBL-EBI @ebi.embl.org EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
Gemma C. Atkinson @gemmaatkinson.bsky.social Lecturer & group leader in Lund University. Computational microbiologist, mostly working on toxin-antitoxin systems, ribosomes and bacterial defence against phages. Director of the LU-Fold protein structure prediction infrastructure of LU.
Atkinson-lab.com
Stephen Turner @stephenturner.us FIeld guide. Quartermaster. Associate Professor and Research Dean at UVA School of Data Science. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Pedro Leão @pedroleao.bsky.social Assistant Professor at Radboud University 🇳🇱 | Brazilian microbiologist 🇧🇷 | Impact of virus-host interactions in Ecology and Evolution 👀
https://vee-lab.eu
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Tatiana Dimitriu @tatianadimitriu.bsky.social @royalsociety University Research Fellow in St Andrews. Bacterial evolution, mobile genetic elements & defence systems, antibiotic resistance, social interactions. 🇫🇷 with some 🇷🇴 and 🇺🇦 roots. She/her
Aude Bernheim @audeber.bsky.social PI at Institut Pasteur
Evolution, immunity, genomics, microbiolgy.
Into immunity in bacteria and its conservation in eukaryotes.
Advocate for more inclusive sciences
https://mdmlab.fr/
Jason Shapiro @jshap.bsky.social Senior Bioinformatician at the University of Chicago. Also interested in phages, bacteria, and coevolution.
Tiffany Taylor @taylorlabgroup.bsky.social Professor of Microbial Ecology and Evolution at the Life Sciences Department at the University of Bath. Royal Society Dorothy Hodgkin Research Fellow. Children's author evolution/genetics. Mum.
https://tiffanybtaylor.wordpress.com/
Richard Lenski @relenski.bsky.social Evolving better E. coli for 75,000 generations. Prof at MSU, but opinions my own. (Ok, I also speak for billions -- er, TRILLIONS -- of E. coli.)
Website for LTEE: the-ltee.org
Banner pic from NYC, shared by Darwin. (The microbiologist, not the other one.)
Melinda Ashcroft (PhD) @biominnie.bsky.social Infectious Disease Epidemiologist - Nontuberculous mycobacteria: Research Fellow at the University of Queensland | Microbial Genomics | Also interested in evolution, pathogenesis and #AMR of clinically relevant bacterial pathogens | She/her | Cat lover
Anna Syme @annasyme.bsky.social Bioinformatics, evolution, genomes, and the Galaxy platform. Also special interest of the day: the undeciphered Harappan script
Gemma Langridge @gemma-langridge.bsky.social Microbiologist group leader (@langridgelab.bsky.social) at the Quadram Institute, mum to two, dark chocolate addict. She/her
Alistair Forrest @alforrest.bsky.social Head of the Systems Biology and Genomics Lab at the Harry Perkins Institute of Medical Research, University of Western Australia
#FANTOM5 #transcriptomics #spatial #cellcommunication #ovariancancer #bioinformatics #singlecell
Mike Inouye @mikeinouye.bsky.social Computational biologist. Geriatric Millennial. Professor, University of Cambridge. British | Australian | American.
www.inouyelab.org | Cambridge, UK
Academic Chatter @academic-chatter.bsky.social Join #AcademicChatter for support & community in higher education.
The Journal of Infectious Diseases @jidjournal.bsky.social In publication since 1904, JID is the premier global journal for original research on infectious diseases. JID is an official journal of @idsainfo.bsky.social
Clinical Infectious Diseases @cidjournal.bsky.social The world's leading journal on infectious diseases. Clinical ID, public health, microbiology, and everything in-between. Official publication of @idsainfo.bsky.social
Andrew Rambaut (🐏🎀) @arambaut.bsky.social Virus evolution | genomic epidemiology| virus origins | phylogenetics | BEAST | ARTIC Network
University of Edinburgh
http://beast.community
http://artic.network
Hall Lab @halllab.bsky.social Prof Lindsay Hall’s research group at University of Birmingham & Quadram Institute. Early life microbiota (we love Bifidobacterium!), and influence of diet, host and pathogens.
Malcolm White @mfwhite2.bsky.social Molecular microbiologist at the University of St Andrews, Scotland. My scientific interests include: CRISPR, antiviral defence, cyclic nucleotide signalling, archaea, nucleases.
Brenton von Takach @certhionyx.bsky.social ecology. population genomics. threatened species. research fellow at Curtin University in Perth, Australia
Mike Beeton @mikebeeton.bsky.social Reader in Medical Microbiology. Enthusiastic about anything Mycoplasma or Ureaplasma.
Hayley Newton @hayleyjnewton.bsky.social Professor of Microbiology, Biomedicine Discovery Institute, Monash University. Admirer of intracellular bacterial pathogens, gin and coffee. Mum. She/Her.
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler