Shuai Wang @wshuai.bsky.social Postdoc at IGI @UC Berkeley | Metagenomics | Bioinformatics | Algorithm | Human genome
Junya Zhang @junyazhang.bsky.social Phage-host interaction; Antimicrobial reisistance; Omics
Humboldt Fellow, Helmholtz Center for Environmental Research-UFZ
Associate Professor, Research Center for Eco-Environmental Sciences,Chinese Academy of Sciences
Paul Rainey @paulbrainey.bsky.social Evolutionary geneticist working with microbes. Absorbed by the curiosity of science and ideas. Department of Microbial Population Biology, MPI for Evolutionary Biology, Plön, Germany & ESPCI, Paris, France.
Bill Hanage @billhanage.bsky.social Refugee from Twix. Arsenal fan and Professor of Epidemiology at Harvard T. H. Chan School of Public Health. Opinions my own.
Michael Brockhurst @brockhurstlab.bsky.social Microbial evolution / University of Manchester
Fab Spagnolo @fabspagnolo.bsky.social Ecology and evolution in microbes. Assistant Prof. @ LIU Post, native NYer, foodie.
Dr Samuel J Pearce @samueljpearce.bsky.social Veterinarian | Resident in Veterinary Microbiology | PhD Candidate | VetMicro.com Creator and Writer | Passionate about AMR, One Health, infectious disease and acute medicine
Alvaro San Millan @sanmillan.bsky.social Plasmid biology, antimicrobial resistance plasmidlab.es
Onisillos @onisillos.bsky.social Professional non-stupid person, massive nerd, and Editor-in-Chief of a very good microbial journal.
(Illustration by David S. Goodsell, RCSB Protein Data Bank. doi: 10.2210/rcsb_pdb/goodsell-gallery-028)
CLIMAR Network @climarnetwork.bsky.social UKRI-funded research network examining the relationship between AMR, climate change and pollution via a Planetary Health framework. #amr #climatechange
Marjon de Vos @lizscurious.bsky.social Cares about tiny things in a larger context
Assoc. prof @uniGroningen
Microbiology, ecology, evolution
#AMR, #UTI
microbecoevo.com
Jan-Willem Veening @veeninglab.com Professor and director at the Department of Fundamental Microbiology, University of Lausanne, https://veeninglab.com/. Interested in antibiotic resistance, bacterial cell biology, host-microbe interactions.
AquOmixLab @aquomixlab.bsky.social Aquatic metabolomics and mass spectrometry. Natural & synthetic compounds in water. At Athens Water (EYDAP SA). Views are our own. www.aquomixlab.com #teammassspec
EEES Clemson University @eees-clemsonu.bsky.social We are the department of Environmental Engineering and Earth Sciences.
We have 3 programs, Environmental Engineering, Biosystems Engineering, and Earth Sciences. Stay connected for job opportunities, scholarships, news, awards, and much more!
Rachel M. Wheatley @rachelmwheatley.bsky.social Evolutionary microbiologist interested in AMR & microbiomes 🦠 UKRI Future Leaders Fellow & Group Leader @ Queen’s University Belfast. she/her. Ex-GB athlete 🇬🇧
Tamar Kohn @viralexplorers.bsky.social Prof in Environmental Engineering @EPFL, studying viruses in water and air. 
Amy Pickering @seqh2o.bsky.social Associate Prof, UC Berkeley. Global health, WASH tech, environmental surveillance, antibiotic resistance, following the pathogens. pickering.berkeley.edu
www.mangrovewater.org
Tim Julian @trj2.bsky.social scientist at Eawag
Eurosurveillance journal @eurosurveillance.org Weekly, peer-reviewed scientific journal on infectious disease epidemiology, prevention & control 😷🩺🧪
#OpenAccess 🔓
#PublicHealth
Publisher: European Centre for Disease Prevention and Control
Impact factor 2024: 7.8
Robert Hoehndorf @leechuck.bsky.social Associate Professor in Computer Science at KAUST. Editor in Chief for the Journal of Biomedical Semantics. Interested in knowledge representation, bioinformatics, neuro-symbolic AI. 
Sonja Lehtinen @sonjalehtinen.bsky.social Bacterial ecology, evolution and epidemiology | Mathematical and statistical modelling | Genomics | AMR. Assistant professor at the University of Lausanne. https://wp.unil.ch/evolutionaryepidemiology
Society for Molecular Biology and Evolution @official-smbe.bsky.social SMBE fosters communication among molecular evolutionists and advances the field.
🔗 smbe.org
💬 smbe2026.org • sites.google.com/view/gene-cultureco-evolution
👥 @smbe-idea.bsky.social
📙 @molbioevol.bsky.social • @genomebiolevol.bsky.social
Raes Lab @raeslab.org Bioinformatics and (eco-)Systems Biology | VIB-KU Leuven Center for Microbiology. @VIB @KU Leuven
https://raeslab.sites.vib.be/en
The Banfield Lab @banfieldlab.bsky.social Located at the University of California-Berkeley at the Innovative Genomics Institute.
Purveyors of Microbial Ecology, Bioinformatics, & Nanogeoscience.
Reposts or likes≠endorsements.
https://www.banfieldlab.com/
Morten Kam Dahl Dueholm @mkddueholm.bsky.social Assoc. Prof. Aalborg University 🇩🇰 Applied microbial ecology with focus on wastewater treatment, anaerobic digestion, and soil. HQ MAGs, transcriptomics, rRNA operon sequencing, culturomics, biofilms, EPS, and functional amyloids.
@lauren-stadler.bsky.social @lauren-stadler.bsky.social 
Francois Lebreton @flebreton.bsky.social Director of bioinformatics at WRAIR-MRSN. Interests in microbial genomics, antimicrobial resistance and bacterial evolution.
Ulf R. Dahle @ulfdahle.bsky.social Specialist Director
Norwegian Institute of Public Health.
Personal posts, not employer’s views.
https://orcid.org/0000-0001-5909-7917
Antimicrobial resistance #AMR @antimicrobial.bsky.social AMR Antimicrobial Resistance
Fernanda C. Petersen,
Professor, University of Oslo and
Ulf R. Dahle,
Specialist Director,
Norwegian Institute of Public Health
The Lancet Microbe @lancetmicrobe.bsky.social The Lancet Microbe is an #OpenAccess journal publishing innovative and practice-changing research and opinion in clinical #microbiology
🌐 thelancet.com/journals/lanmic/home
Philipp Engel @pengellab.bsky.social Microbiologist at UNIL Switzerland, interested in Microbiota-host interactions, symbiosis, evolution and genomics, and social bees
engelbeelab.com
Uli Klümper @ulikluemper.bsky.social Microbial Ecologist @ TU Dresden
Focusing on Evolution, Ecology and Environmental dimensions of AMR & plasmids
Formerly @ DTU & UoExeter
He/him
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Joshua Weitz @joshuasweitz.bsky.social Professor of Biology & Institute for Health Computing, U of Maryland; explores how viruses impact human & environmental health;
'Asymptomatic' (JHU Press - https://bit.ly/asymptomatic_book)
&
'Science Matters' (https://substack.com/@joshuasweitz)
Moritz Kraemer @mugkraemer.bsky.social Scientist & Prof @UOxford
https://kraemerlab.com/
https://www.oxfordmartin.ox.ac.uk/pandemic-genomics
https://www.psi.ox.ac.uk/ 
The Center for Microbial Medicine at CHOP @centermicrobialmed.bsky.social The Center for Microbial Medicine at the Children’s Hospital of Philadelphia is dedicated to finding cures and improving pediatric health through the lens of the microbiome.
https://www.research.chop.edu/center-for-microbial-medicine
Ricardo León-Sampedro @rleonsampedro.bsky.social | Microbial ecology & evolution
| Plasmids, genetic invasion, and antimicrobial resistance
| IPLA-CSIC
| RicardoLeonSampedro.com
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health 🧬🦠🔎
Associate Professor of Computer Science, Rice University 🦉💻
Treangen Lab website: www.treangenlab.com
TARGetAMR @target-amr.bsky.social TARGetAMR is a UK-based research network funded by UK Research and Innovation (UKRI) with the primary goal of using genomics to tackle antimicrobial resistance (AMR).
Nature Portfolio @natureportfolio.nature.com Nature Portfolio’s high-quality products and services across the life, physical, chemical and applied sciences is dedicated to serving the scientific community.
Jonathan Haars @jonathanhaars.bsky.social PhD-student in clinical microbiology at Uppsala University and Uppsala University Hospital, Sweden.
Interested in Nanopore sequencing, metagenomics, SARS-CoV-2 and more. 
Paul Bollyky @pbollyky.bsky.social Stanford University Infectious Disease Doc studying bacteriophages, bacterial infections, and innate immunity.
Alex Crits-Christoph @acritschristoph.bsky.social Computational microbiologist
I like to post about: microbial genomics, microbial ecology, evolution, micro+plant biotechnology, climate, symbiosis, virology, ag, sci publishing and policy
Kröger Lab @kroegerlab.bsky.social Microbiology Lab run by Carsten Kröger at the Moyne Institute of Preventive Medicine, Trinity College Dublin, the University of Dublin.
Yu Wan 万宇 @wanyuac.bsky.social Research fellow in medical bacteriology at the University of Liverpool in the UK, studying bacterial genomics, evolution, antimicrobial resistance, and infectious disease epidemiology using bioinformatics and computational biology.
Sheppard Lab @sheppardlab.bsky.social Working to understand ecology, epidemiology and evolution of pathogenic bacteria at University of Oxford.
Account operated by group members.
Will Gaze @willhgaze.bsky.social Microbiologist, AMR, environmental scientist, communicating science to people who make things happen
Alexandre Almeida @alexmsalmeida.bsky.social MRC Career Development Award fellow at the University of Cambridge | Group Leader of the Microbiome Function and Diversity lab (https://microfundiv-lab.github.io) | Bioinformatics, Machine Learning, Metagenomics, Functional modelling, Human microbiome
Hung-Ji Tsai @hjtsai.bsky.social Genome dynamics, drug resistance and host-fungal co-evolution at the University of Birmingham. 🇹🇼🇺🇸🇬🇧
Tsai Lab: https://sites.google.com/view/tsailab
University of Birmingham @unibirmingham.bsky.social Official account for the University of Birmingham.
Changing how the world works.
www.birmingham.ac.uk
Tanja Stadler @tanjastadler.bsky.social Full professor for Computational Evolution at ETH Zürich
@bigdatabiology.bsky.social @bigdatabiology.bsky.social 
Eawag Aquatic Research @eawag.bsky.social Science that matters 🔬💧 The official account of the Swiss Federal Institute of Aquatic Science and Technology Eawag. www.eawag.ch 
IWA MEWE 2025 @mewe2025.bsky.social IWA MEWE 11th Microbial Ecology and Water Engineering Conference | June 2-5, 2025 | Atlanta, GA, USA
Leo Lahti @antagomir.bsky.social Prof. in Data Science, Turku, Finland. Analysis and modeling of complex natural and social systems. Open X.
Elisabeth Bik @elisabethbik.bsky.social Science integrity consultant and crowdfunded volunteer, PhD.
Ex-Stanford University. Maddox Prize/Einstein F Award winner
NL/USA/SFO.
#ImageForensics
@MicrobiomDigest on X.
Blog: ScienceIntegrityDigest.com
Support me: https://www.patreon.com/elisabethbik
Elaina G @perilousunknown.bsky.social Bioinformatician at Viridos | Microbial Ecology | Functional and phylogenetic diversity one cell at a time
Jeremie Kalfon 👨💻🧬🤖🚀 @jkobject.com Doing a Ph.D. AI in Bio. | Ex @WhiteLabGx @BroadInstitute @MIT | Built @PiPleteam | ML, Cancer, Genomics, Data Sci, Entrepreneur, FullStack Dev | All views are mine
Francesco Asnicar @fasnicar.bsky.social Researcher at Dept. CIBIO (Univ. of Trento, Italy), previously postdoc @cibiocm.bsky.social, love music and play keyboards.
Alessandra Ferrillo @alessfer.bsky.social PhD graduate, curious scientist passionate about marine life, nicriobiomes, sustainability and finding innovative solutions to environmental challenges
Daan Speth @daanspeth.bsky.social Computational microbiologist. Senior scientist at @cemess.bsky.social, @univie.ac.at.
Microbial ecology, mostly of nitrogen cycle microbes, and data driven physiology.
Maintainer of the GlobDB genome database https://globdb.org
biomickwatson @biomickwatson.bsky.social Reluctant
plasmidsaurus @plasmidsaurus.bsky.social Sequence plasmids, amplicons, colonies, AAV, yeast, and bacterial genomes! Our advanced sequencing delivers comprehensive visibility, higher accuracy, and the ability to detect structural variations and rare mutations that other sequencing methods miss.
Mike Lee @astrobiomike.org Former musician-wannabe. Current micro. ecologist/bioinformatician PhD.
Deep biosphere/oceans (USC) -> Astrobiology/Space Bio (NASA) 👽 -> National Biodefense (DHS)
Bioinf-beginners go to http://microbialomics.org | For phylogenomics, GToTree :) | he/him
Edinburgh Infectious Diseases @uoe-eid.bsky.social The network based at the University of Edinburgh for infectious disease researchers.
https://edinburgh-infectious-diseases.ed.ac.uk/
Ross Fitzgerald @jrossfitz.bsky.social Microbiologist, Bacterial evolution, Roslin Institute, University of Edinburgh
Aislinn Dunne 邓嘉琳 @aislinndunne.bsky.social 🌴🌊Marine ecologist & conservationist
🪸🐠Studying coral reef ecology, conservation, and habitat connectivity
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Phil Hugenholtz @xrefugee13.bsky.social Microbiologist
Manuel Kleiner @manuelkleiner.bsky.social Associate Professor, Microbiomes and Complex Microbial Communities, North Carolina State University
Microbiology, Host-Microbe Interactions, Microbial Ecophysiology, Proteomics and Metaproteomics
https://kleinerlab.cals.ncsu.edu/
Max Planck Institute for Marine Microbiology @mpimarinemicrobio.bsky.social As the only "marine" institute within the Max Planck Society, we do basic research in order to better understand microbial life in the oceans and its impacts the environment.
A. Murat Eren (Meren) @merenbey.bsky.social Professor of Ecosystem Data Science at @hifmb.bsky.social studying the ecology and evolution of microbes through high-resolution 'omics and #anvio
Ryan Ziels @ryanziels.bsky.social Associate Professor of Environmental Engineering | UBC | Engineer | Microbiologist | Surfer of mountains & waves
https://emberrlab.civil.ubc.ca/
Seth Bordenstein @symbionticism.bsky.social Scientist, Huck Professor: Microbiome, Virome, Symbiosis, Evolution, Genetics, Phylosymbiosis, Holobiont, Wolbachia, Phage | Director of One Health Microbiome Center @psumbiome.bsky.social | SciEd: @wolbachiaproj.bsky.social | @holobiontbiology.bsky.social
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Jeremy Barr @jeremyjbarr.bsky.social Bacteriophage biologist and enthusiast. Associate Professor at the School of Biological Sciences, Monash University.
The Hess Lab @ UC Davis @thehesslab.bsky.social Anaerobic Microbiology, Climate Change, Enzyme Discovery, Microbiome, Omics, Rumen Microbiology, 
Magnus Ø Arntzen @magnusarntzen.bsky.social Research professor at @UniNMBU working with plant-degradation, meta-omics, and denitrifying microbial communities. #ERCCoG awardee @ERC_Research #microbiome #metaproteomics
Ben J Woodcroft @benjwoodcroft.bsky.social Yet another microbial bioinformatician, group leader, dad
github.com/wwood https://research.qut.edu.au/cmr/team/ben-woodcroft/
Cameron Thrash @jcamthrash.bsky.social Professor, USC Marine and Environmental Biology, microbe hunter. Dad, husband. he/him. Not a bot. thethrashlab.com @the.thrash.lab
Hall Lab @halllab.bsky.social Prof Lindsay Hall’s research group at University of Birmingham & Quadram Institute. Early life microbiota (we love Bifidobacterium!), and influence of diet, host and pathogens.
Rob Edwards @linsalrob.bsky.social Bioinformatician and microbiologist at Flinders University in Adelaide. @linsalrob on all your socials
Sabina Leanti La Rosa @sabinallarosa.bsky.social Associate Professor of Microbiology @UniNMBU, Norway. Fond of carb degradation by gut #microbiomes, #multiomics, #CAZymes,#prebiotics. Editorial Board Member @CommsBio. Italian 🇮🇹 via 🇺🇸 to 🇳🇴
Phil B. Pope @microbesrule.bsky.social Playing with all sorts of weird and wonderful microbiomes since 2014. @Centre for Microbiome Research - QUT Australia
Alan McNally @alanmcn1.bsky.social Head of the School of Infection, Inflammation & Immunology @ Uni Birmingham. Proud Scot. Oversaw a few Covid PCR tests
Matt Olm @mattolm.bsky.social Assistant Professor at CU Boulder
Studying the human microbiome
https://www.colorado.edu/lab/olm/
Sean Gibbons 🦠💩 @gibbological.bsky.social microbiome researcher | professor at NYU and @isbscience.org | affiliate prof @uwbioe.bsky.social | ecology, evolution, and systems biology of 💩 🦠 | precision/personalized nutrition/medicine ⚕️ | 🏳️🌈 he/him | lab website: gibbons.isbscience.org
Bas E. Dutilh @bedutilh.bsky.social 
Hutlab @hutlab.bsky.social The Huttenhower Lab at the Harvard T.H. Chan School of Public Health: microbial community function and human microbiome population health;
Moderator: @chahat.bsky.social
Microbiome Virtual International Forum @microbiomevif.bsky.social • a free recurring bite-sized alternative to multi-day #microbiome conferences •
➡️ Every month, a new event... join #MVIF community!
https://www.microbiome-vif.org/en-US
Segata Lab @cibiocm.bsky.social The Laboratory of Computational Metagenomics led by Nicola Segata
**We are hiring, get in touch if interested!**
http://segatalab.cibio.unitn.it/
Moderator @svetlanaup.bsky.social
Svetlana Ugarcina Perovic @svetlanaup.bsky.social • microbiome scientist @cibiocm.bsky.social
• global communication lead @microbiomevif.bsky.social
• international internship coordinator @bioconductor.bsky.social
• @nsurp.bsky.social mentor
✎ https://microbiomedigest.com/author/svetlanaup/
Amy D Willis @amydwillis.bsky.social Biodiversity-loving, error bar-needing statistics nerd; Associate Professor @UWBiostat. Methods & software for #microbiome & #biodiversity data. She/her.
Andy J. Green @drandygreen.bsky.social Professor in ecology at CSIC, mainly researching into wetland ecology, especially waterbirds and dispersal processes (e.g. seed dispersal, AMR, plastics). Mancunian. Alumnus of Magdalen and Wolfson Colleges
https://www.researchgate.net/profile/Andy-Green-7
Alasdair Hubbard @dralhubb.bsky.social Assistant Professor - research group works on the evolution of AMR and understanding cryptic mechanisms of resistance. All views my own. T1D
Willem van Schaik @wvschaik.bsky.social Microbiology, microbiome, antimicrobial resistance. Sometimes UK politics. Head of Research of the School of Infection, Inflammation and Immunology, University of Birmingham. Also Co-Director of @target-amr.bsky.social.
Craig MacLean @craigmaclean.bsky.social Scientist working on antibiotic resistance, evolution, and mobile genetic elements. Prof at U.Oxford and Fellow of All Souls College 
Bioinformatics.ca Jobs @bioinfojobs.bsky.social Bioinformatics.ca Jobs is about positions in bioinformatics in university, research institutes, government labs & companies for Canadians.
Dave Larsen @dalarsen.bsky.social Epidemiologist at Syracuse University working on infectious disease surveillance, outbreaks, and response.