Cluster of Excellence CMFI @cmfi.bsky.social “Controlling Microbes to Fight Infections” (CMFI) researchers from different disciplines elucidate the mechanisms of interaction between beneficial and harmful bacteria and the host.
– University of Tübingen, funded by the German Research Foundation (DFG)
James Marsh @jmarsh.bsky.social Group Leader navigating microbiome genetics & engineering @ Max Planck in Tübingen, Germany. Rarely late.
☕️🎧🇦🇺🎥
Prof. Ruth Ley FRS @microbiome.bsky.social Director of Department of Microbiome Science at MPI Biology Tübingen Germany. Also known as Leylab.com.
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Dr. Amy Lee @minisciencegirl.bsky.social Assistant Professor @ SFU MBB | Systems Biology of Host-Pathogen | Vaccinology | Neonatal Sepsis | Pathogen Genomics | Loves data, food & art.
Alvaro Sanchez @asanchezlab.bsky.social CSIC Professor and Principal Investigator of the Quantitative Biology group at IBFG in Salamanca. Previously at Yale EEB, CNB-CSIC. Our group works on building predictive models of biological teams. More information at www.sanchezlaboratory.weebly.com
Cell Press @cellpress.bsky.social Cell Press partners with scientists across all disciplines to publish and share work that will inspire future directions in research. #ScienceThatInspires
Manuela Raffatellu @manuelar.bsky.social From Sardinia to California - Professor at UCSD - Love microbes. Find me by the ocean or at my Pilates studio
Sean Gibbons 🦠💩 @gibbological.bsky.social microbiome researcher | professor at NYU and @isbscience.org | affiliate prof @uwbioe.bsky.social | ecology, evolution, and systems biology of 💩 🦠 | precision/personalized nutrition/medicine ⚕️ | 🏳️🌈 he/him | lab website: gibbons.isbscience.org
Elisabeth Bik @elisabethbik.bsky.social Science integrity consultant and crowdfunded volunteer, PhD.
Ex-Stanford University. Maddox Prize/Einstein F Award winner
NL/USA/SFO.
#ImageForensics
@MicrobiomDigest on X.
Blog: ScienceIntegrityDigest.com
Support me: https://www.patreon.com/elisabethbik
EMBL-EBI Training @training.ebi.embl.org Delivering world-class bioinformatics training in data-driven life sciences virtually and onsite at EMBL's European Bioinformatics Institute in Hinxton, UK.
www.ebi.ac.uk/training
Shraddha Shitut @shetoot.bsky.social Scientist🔬🦠, doodler✍🏻, investigating microbial interactions, evolution and behavior at different spatial scales through microscopy! Postdoc @vangestel lab EMBL
https://scholar.google.nl/citations?user=dksWFxoAAAAJ&hl=en
Johanna Joyce @johannajoyce.bsky.social Professor, University of Lausanne 🇨🇭 and Ludwig Institute for Cancer Research
President, European Association for Cancer Research
Mentor, Teacher, Advocate, Mum
@joycelab.bsky.social
The LeibundGut-lab @lableibundgut.bsky.social We study fungal commensals and their impact on health and disease. University of Zurich, Switzerland and MRC Center of Medical Mycology at University of Exeter, UK.
Ece Kartal @ecekartal.bsky.social 🎓 previously @borklab.bsky.social @EMBL.org & @saezlab.bsky.social @uniHeidelberg.bsky.social
📍Heidelberg
🦠Human microbiome | Host-microbiome interactions | Multiomics integration
Emily White @emily-white.bsky.social Microbiologist 🦠 Chief editor at Nature Microbiology📚
Views my own
Christina (Chris) Tobin Kahrstrom @microchris.bsky.social Senior editor at Nature, handling the micro stuff, including bacterial and fungal pathogens, host-associated microbiomes, host-microbiota interactions, phage-bacteria interactions, antimicrobial discovery and AMR, among many others...
All views my own
Liam Fitzstevens @liamfitzstevens.bsky.social Postdoc in the Ley Lab focused on the human gut microbiome / Max Planck Insitute for Biology
Carolina Tropini (TropiniLab@UBC) @ctropini.bsky.social Assistant Professor at the University of British Columbia studying the gut microbiota and abiotic environment in health and disease.
http://tropini.microbiology.ubc.ca
David Berry @davidberry1.bsky.social Prof. at University of Vienna, Center
for Microbiology and Environmental Systems Science, Division of Microbial Ecology
Kelsey Huus @kelseyhuus.bsky.social - Post-doctoral researcher in microbiology & immunology at the Max Planck Institute, focusing on gut microbiome, diet, and human immune responses
- Upcoming Assistant Professor at the University of Ottawa 🇨🇦
https://www.huuslab.com/
SellinLab @sellinlab.bsky.social The Mikael Sellin & colleagues infection biology laboratory at Uppsala University/SciLifeLab. MS responsible for posts.
@symbnet.bsky.social @symbnet.bsky.social 
Wiep Klaas Smits (ExpBac/CMAT) @smitslab.bsky.social Assoc. prof. at LUMC/@unileiden. Cdiff, DNA replication, AMR, microbiome, anaerobes. Clostpath Steering committee. Education officer ESGCD. Previously: @unigroningen and @mitofficial. https://sites.google.com/view/expbac-lumc/homepage
Sigi Hapfelmeier @sigientist.bsky.social Gut Microbiome and mucosal immunology researcher @Unibern, Switzerland
Michael Wagner @michiwagner4.bsky.social Prof. at Centre for Microbiology and Environmental Systems Science at University of Vienna, Austria and at Aalborg University, Denmark. Director of Cluster of Excellence "Microbiomes drive Planetary Health", Dad, Views are my own. 
Bettina Weigelin @bettina-weigelin.bsky.social Scientist exploring immune cell dynamics across scales. Passionate about microscopy - live-cell, intravital, and light-sheet imaging - and linking cellular functions in tissues to systemic effects.
Nazgul Sakenova @nazgulsakenova.bsky.social HHMI-HHWF PostDoc in Bernhardt lab at Harvard | bacterial cell biology
PhD @typaslab.bsky.social at EMBL | systems microbiology
@simonheilbronner.bsky.social @simonheilbronner.bsky.social Prof. at the LMU Munich. Interested in S. aureus and the nasal microbiome.
@saravanandevendran.bsky.social @saravanandevendran.bsky.social 
Lucía Pérez @luuuprz.bsky.social PhD student @mateuslab.com 🧫
Umeå University
esp/eng
Felix M Key @keyfm.bsky.social Research Group Leader @mpiib_berlin.
#Genetics of clinical and ancient #microbes to understand the #evolution of #infectious #diseases and the #microbiome
mpiib-berlin.mpg.de/2003543/key-lab
Roi Avraham @roi1avraham.bsky.social Associate Professor at the Weizmann Institute. Host-microbe interactions. #immunity #microbe. Lab: https://www.weizmann.ac.il/dept/irb/avraham/avraham-lab-homepage
Kimberly Kline 🏔 @kimingeneva.bsky.social Professor, University of Geneva. We study Enterococcal biofilms, pathogenesis, and AMR. Formerly @KimInSingapore 🌴.
https://kimberlyklinelab.com/
Ian Henderson @ianhenderson.bsky.social So here we are. Hato Hone St John in New Zealand Aotearoa. Sometime artist. He/him.
Trends in Biochemical Sciences @cp-trendsbiochem.bsky.social TIBS is celebrating its 50th anniversary in 2026 - join in the fun and share your ideas with us!
To learn more, visit: https://www.cell.com/trends/biochemical-sciences/anniversary
Managed by editor @sanniejculbertson.bsky.social
Nicolas Tromas @cyanophage.bsky.social Cyano lover, working on Cyanobacteria-cyanophages dynamic, bloom toxicity prediction, cyano microbiome.
Evolutionary ecologist, fake-bioinformatician & author of children book.
David Suter @davidsuter.bsky.social PI at EPFL / gene regulation / chromatin / epigenetics / genomics / stem cells / transcription factors / single molecule / protein turnover https://www.epfl.ch/labs/suter-lab/ - and 🎹 https://www.youtube.com/@davidsuter594 / https://soundcloud.com/suterd7
Bart Deplancke @bartdeplancke.bsky.social Professor in Systems Biology & Genetics @EPFL, opinions my own; Single Cell Omics / Gene Regulation / Transcription Factor / Stem Cells / Regulatory Variation / ML / Imaging / Adipose Biology / Microfluidics
https://www.epfl.ch/labs/deplanckelab
Gioele La Manno @gioelelamanno.bsky.social Professor at #EPFL - #RNAVelocity inventor - Laboratory of Brain Development and Biological Data Science. Single-cell and spatial biologist studying brain development and lipids. #ERCStg investigator
Marcel Salathé @marcelsalathe.bsky.social EPFL Professor, Co-Director EPFL AI Center, digital epidemiologist, CH++
Martin Schrimpf @mschrimpf.bsky.social NeuroAI Prof @EPFL 🇨🇭. ML + Neuro 🤖🧠. Brain-Score, MIRAGE, TopoLM. Previously: PhD @MIT, ML @Salesforce, Neuro @HarvardMed, & co-founder @Integreat. go.epfl.ch/NeuroAI
Charlotte Bunne @bunnech.bsky.social Assistant Professor at @EPFL in Computer Science and Life Sciences. PostDoc at @Genentech and @Stanford. PhD at @ETH and @BroadInstitute.
www.aimm.epfl.ch
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Bork Group at EMBL Heidelberg @borklab.bsky.social Computational biology lab focusing on microbiomes in the human gut and the environment
Homepage: https://www.bork.embl.de/
Mastodon: https://mstdn.science/@BorkLab
Willem van Schaik @wvschaik.bsky.social Microbiology, microbiome, antimicrobial resistance. Sometimes UK politics. Head of Research of the School of Infection, Inflammation and Immunology, University of Birmingham. Also Co-Director of @target-amr.bsky.social.
Marco Galardini @mgalactus.bsky.social Computational biologist with a taste for microbiology. Associate professor at Twincore, MHH and HZI
Wikipedia wanderer
Lab website: https://www.microbial-pangenomes-lab.org/
Eduardo Rocha @epcrocha.bsky.social Scientist, genomics, evolution, microbiology, computational biology, Institut Pasteur/CNRS, Paris
Pedro Beltrao @pedrobeltrao.bsky.social Associate professor at ETH Zurich, studying the cellular consequences of genetic variation. Affiliated with the Swiss Institute of Bioinformatics and a part of the LOOP Zurich.
supriya khedkar @khedkarsupriya.bsky.social Principal Investigator at BioQuant, University of Heidelberg
https://www.bioquant.org/groups/khedkar
Interested in Mobile Genetic Elements | Antibiotic resistance | (meta)genomics | evolution
Previously @borklab @embl @ncbsbangalore
Pamela Ferretti @pamferretti.bsky.social Postdoc in the Blekhman lab at UChicago | Infant and breast milk microbiome | wild animal microbiome | antimicrobial resistance | microbial ecology | Member of @microbiomevif.bsky.social
https://pamelaferretti.net/
Tobias Wenzel @makertobey.bsky.social Prof. @UCatolica. Tech dev for analysis of cellular interactions for biomedicine through #OpenHardware, droplet #microfluidics & #bioimaging. Ex @EMBL @Cambridge_Uni
Nicole Dubilier @nicoledubilier.bsky.social Director Max Planck Institute Marine Microbiology
Head of Symbiosis Department
https://www.mpi-bremen.de/en/Department-of-Symbiosis.html
Prof at Uni Bremen, MARUM
symbiosis, microbiome, marine microbiology
Sebastian Schmidt @tsbschm.bsky.social Lecturer in Microbiome & Health at @apcmicrobiomeirel.bsky.social & @ucc.ie
Alumnus @borklab.bsky.social
Microbiome, microbial ecology & metagenomics.
Michael Kuhn @biocs.bsky.social Computational biologist. Research staff scientist and research coordinator in the @borklab.bsky.social at @embl.org Heidelberg.
Elisabetta Cacace @elisca.bsky.social Incoming SNSF Ambizione group leader at EPFL. Interested in bacteria-host interactions in health and disease.
https://elisabettacacace.github.io/BHI-Lab/
Ewan Birney @ewanbirney.bsky.social Director of EMBL-EBI. I have an insatiable love of biology. Consultant to ONT and Cantata (Dovetail)
Universität Tübingen @unituebingen.bsky.social Offizieller Account der Universität Tübingen.
Impressum: https://uni-tuebingen.de/impressum/
Datenschutz: https://uni-tuebingen.de/impressum/bluesky-hinweise/
Andrea Vettiger @avettiger.bsky.social Assistant Professor
@dmf-unil.bsky.social
https://wp.unil.ch/vettiger-lab/
Postdoc Bernhardt lab | PhD Basler lab.
Shining light on small bugs to reveal their amazing biology! #elongasome #divisome #T6SS
Lucas Boeck @lucboeck.bsky.social Group leader and pulmonologist @DBM Basel / University of Basel / University Hospital Basel; studying mechanisms underlying antibiotic treatment failures #genomics #imaging #automation #clinical studies
Cell Chemical Biology @cp-cellchembiol.bsky.social Cell Chemical Biology is a #chemicalbiology journal from
@cellpress.bsky.social. Editor-in-Chief @mishtudey.bsky.social
Marjon de Vos @lizscurious.bsky.social Cares about tiny things in a larger context
Assoc. prof @uniGroningen
Microbiology, ecology, evolution
#AMR, #UTI
microbecoevo.com
Viruses of Microbes 2024 @vom2024.bsky.social Viruses of Microbes 2024 - International conference on Viruses of Microbes; 15-19 July 2024, Cairns, Australia.
Tom Ellis @proftomellis.bsky.social Synthetic Biology & Synthetic Genomics @ Imperial College London and the Sanger Institute. Bilingual in English and DNA. Views are either my own or my microbes'
Luuk Loeff @lloeff.bsky.social Principal Investigator at Leiden University Medical Center
Host-Defence | Structural biology | Single-molecule Biophysics
http://www.loefflab.com
Ineos Oxford Institute for antimicrobial research @ineosoxford.bsky.social Bringing together the best of research and industry to overcome one of the biggest threats facing humanity.
Host Microbe interactions @hostmicrobelit.bsky.social Trying to keep up with the literature. Infection, microbiome, bioinformatics and multi-omics.
Avigail Stokar-Avihail @aavihail.bsky.social HFSP postdoctoral fellow @TypasLab @EMBLHeidelberg | Alumnus of @SorekLab @WeizmannScience. Interested in microbial interactions and warfare, microbial genomics & phages 🦠🧬👩🏽🔬
@ViollierPat @viollierpat.bsky.social Works on sweet bugs & drugs: glycosylated flagella
& genetics of antibiotic susceptibility
@UniversityofGeneva
🦠 #glycotime
Tara Bartolec @tarabartolec.bsky.social EIPOD-LinC postdoc fellow in the Savitski and Typas labs at EMBL, Heidelberg. Proteomics, phages, PTMs, XLMS 🇦🇺🦠🧑🔬
Euresearch @euresearch.ch Euresearch is your Swiss guide to European research and innovation. We provide information and guidance on cooperation and funding opportunities offered by the EU Framework Programme "Horizon Europe" and other initiatives.
Flora Vincent @floravincent.bsky.social Group Leader at EMBL spying on the social life of marine microbes and pushing for more inclusive sciences | Tara Oceans | Plankton Manifesto
https://www.embl.org/groups/vincent/
https://planktonmanifesto.org/
Samir Giri @isamirgiri.bsky.social Postdoctoral Fellow @typaslab.bsky.social @embl.org
Interested in ecology and evolution of microbial communities, reciprocal drug-microbiome interactions, microbiome modulation
🦠🧫🔬🧪💊💩🧬
https://scholar.google.com/citations?user=dhZfxqMAA
Stefan O. Bassler @stefanbassler.bsky.social Evolutionary Systems Biology of Aging, @typaslab.bsky.social @embl.org PhD & Bridging Excellence Postdoc (LifeScienceAlliance) with
@petrovadmitri.bsky.social & Steinmetz lab @stanford.edu and Aulehla lab @embl.org
Luis Teixeira @lmvteixeira.bsky.social Host-Microbe Interactions lab.
#Drosophila, #Wolbachia, #microbiota, and #viruses.
Católica Biomedical Research Centre.
Medical School, Universidade Católica Portuguesa.
Portugal.
SymbNET - a EUHorizon2020 Twinning
network on Host-Microbe Symbiosis
Sinem Saka @sinemsaka.bsky.social Scientist, Group Leader @EMBL Heidelberg.
Xavier De Bolle : Xa Team at UNamur @namurxa.bsky.social Research team interested in molecular and cellular biology of the Brucella abortus pathogen
Alex Bateman @alexbateman1.bsky.social Head of Protein Sequence Resources at EMBL-EBI.
Eva Kowalinski @kowaeva.bsky.social Group Leader at EMBL Grenoble. mRNA, tRNA, RNA modifications, structural biology, x-ray, cryo-EM, trypanosomes and other science fun.
Mariana Pinho @pinholab.bsky.social Full Professor at ITQB NOVA. Microbiologist. Microscopist. Bacterial Cell Biologist. Mother of 3.
STCmicrobeblog @stcmicrobeblog.bsky.social A blog that aims to share appreciation for the width & depth of microbial activities.
Posts by Christoph, not necessarily the opinion of all team members of Small Things Considered (STC) https://smallthingsconsidered.blog/
Peter Chien @chienlab.bsky.social Looking at small things making small things even smaller. UMass Amherst Biochemistry. Microbiology. Views are my own. He/him 
Lars Dietrich @laahrs.bsky.social I love bacteria.
Biofilm metabolism & antibiotic tolerance dietrichlab.com
Biological Sciences, Columbia University
(a yawn is a silent scream for coffee)
Erin Goley @goleylab.bsky.social Bacterial cell biologist.
Martin Thanbichler @thanbichlerlab.bsky.social Bacterial cell biology and biochemistry | Professor at the University of Marburg, Germany
Uppsala Antibiotic Center @uac-uu.bsky.social Research, education & innovation on #Antibiotics & #AntibioticResistance with a multidisciplinary approach at Uppsala University. Producing #theAMRstudio!
www.uac.uu.se
Masschelein Lab @masscheleinlab.bsky.social Engineering Microbes for Drug Discovery & Lead Optimization | Exploring the Biosynthetic Creativity of Microorganisms
@VIB @KU Leuven -- www.masscheleinlab.org
Arnaud Krebs @arnaudkr.bsky.social Group leader at EMBL Heideberg
https://www.embl.org/groups/krebs/
Berkeley Lab @berkeleylab.lbl.gov Official account of Lawrence Berkeley National Laboratory (LBNL), a U.S. Department of Energy national lab. newscenter.lbl.gov
Maria Bernabeu @mariabernabeu.bsky.social Group Leader at EMBL Barcelona. Malaria, bioengineered vascular models, blood-brain barrier
Department of Ecology and Evolution (DEE) - UNIL @dee-unil.bsky.social 📍Lausanne, Switzerland
The DEE covers the breadth of ecology and evolution, and aims to cultivate an atmosphere of scientific excellence which is respectful of people.
Mastodon: https://ecoevo.social/@dee_unil
IG: https://www.instagram.com/dee_unil
Microbial Systems Ecology Lab @micsysecolab.bsky.social We study general principles that organise microbial systems, at ETH Zürich and Eawag | Posts by group members
https://mse.ethz.ch
Liselot Dewachter @liselotdewachter.bsky.social Streptococcus pneumoniae cell biology at UCLouvain & de Duve Institute, Brussels, Belgium
Sorek Lab @soreklab.bsky.social The Sorek Lab
Weizmann Institute of Science, Israel
https://www.weizmann.ac.il/molgen/Sorek/
Daniel Machado @dan1elmachado.bsky.social Associate Professor of Computational Biology at NTNU
Cristina Viéitez @crisvieitez.bsky.social Group Leader (RyC) at CSIC - IBFG in Salamanca, Spain @CSIC.es - Molecular & Systems Biology Lab.
Cell Signalling - Chromatin - PTMs - Yeast
ERC starting #PTMtalk
Joel Selkrig @jselkrig.bsky.social Updates from the Selkrig Lab. Exploring the function of secreted bacterial proteins in the context of infection and the gut microbiome.
www.ukaachen.de/kliniken-institute/institut-fuer-medizinische-mikrobiologie/forschung/ag-selkrig/
Florian Huber @me-datapoint.bsky.social Professor for data science at HSD, @zdd-hsd.bsky.social
| ML fan & critic | current research mostly #datascience, #machinelearning, #cheminformatics #dataviz #nlp | ✨ #openscience #openaccess #rse | living data point 🚲
Shu-Sin Chng @figlegend.bsky.social Assoc Professor @ National University of Singapore. 🇸🇬 NUS Assoc Dir for SCELSE. Membrane/lipid biochemist. Educator who teaches chemistry in biology. Advocate (Vice Dean) for students. Horn player. 📯📯
https://chemistry.nus.edu.sg/people/chng-shu-sin/