Marc Robinson-Rechavi @marcrr.ecoevo.social.ap.brid.gy Posts mine alone, in English (mostly) & French. #Evolution #Bioinformatics #openaccess #EDI. Director of @dee_unil and group leader at @SIB. He/Him. PI of @bgeedb, of […]
🌉 bridged from ⁂ https://ecoevo.social/@marcrr, follow @ap.brid.gy to interact
Cei Abreu-Goodger @ceiabreu.bsky.social Computational Biology of RNA
Elisabeth Hellec @elisabethhellec.bsky.social 🦠 PhD student | swine Flu | @anses-fr.bsky.social
🧬 Bioanalysis | bioinformatic | pipeline
👩🏽💻 President @jebif.bsky.social
Atlas of Variant Effects Alliance @varianteffect.bsky.social Advancing the promise of the Human Genome Project by interpreting the landscape of human genetic variation.
https://www.varianteffect.org
https://www.linkedin.com/company/atlas-of-variant-effects-alliance
#AtlasOfVariantEffects
sina b @sina.bio HHMI Hanna Gray Fellow at @UCBerkeley w/ @airstreets. PhD @caltech, Math & ME BS @mit. I enjoy drinking tea, riding bikes, taking photos, and exploring nature.
Damir Baranasic @da-bar.bsky.social Research Associate at @institutrb 🧬. Researching into #ComputationalBiology & #Bioinformatics. Passionate about #RegulatoryGenomics & #ComparativeGenomics 🧪. Opinions are my own 🌍.
Daniel Davila @fddavila.bsky.social Computational Biologist | Arctic and Gut microbiome @ University of Calgary
García Knight Lab @levelab.bsky.social Laboratorio de Enfermedades Virales Emergentes. Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México
IFB/ELIXIR-Fr @ifb-elixir-fr.bsky.social Institut Français de Bioinformatique (IFB) et noeud français d'ELIXIR Europe
IFB is the national #bioinformatics infrastructure for #lifesciences communities and the French node of @elixir-europe.org
💻 https://www.ifb-elixir.fr/
Nordic Computational Biology @nordic-compbio.org For all things #Computational #Biology in the Nordics. #NordicCompBio is for #bioinformaticians, computer scientists, and life scientists. Join the NCB team at https://www.nordic-compbio.org
Zeitlinger Lab @zeitlingerlab.bsky.social Our long-term research goal is to understand and predict gene regulation based on DNA sequence information and genome-wide experimental data.
Daniel Ibrahim @danielibrahim.bsky.social Group Leader @ BIH Berlin and MPI Molecular Genetics. I play around with DNA because I‘d like to know how the genome functions.
Žiga Avsec @avsecz.bsky.social Genomics initiative lead at @GoogleDeepMind.
Models from our team: Enformer, AlphaMissense, and AlphaGenome.
James Lloyd 🧬 @jamespblloyd.bsky.social Synthetic AstroBotanist Engineer of synthetic gene circuits in plants. 🇬🇧🇪🇺 now in 🇦🇺. He/They.
Google Scholar: http://shorturl.at/dnHVZ
Compbio blog: .com
EPIGENETIC HULK @epigenetichulk.bsky.social EPIGENETIC HULK SMASH PUNY GENOME. MAKE GENOME GO. LOCATION: NOT CENTROMERE, THAT FOR SURE
Gina Reynolds, Human-Data Interaction 📊🛠 @ginareynolds.bsky.social ggplot2 extenders meetup, discussion
- ggplot2-extenders.github.io/ggplot-extension-club/
- evamaerey.github.io/easy-geom-recipes/
- evamaerey.github.io/ggplot2-extension-cookbook/
- github.com/EvaMae
Jesús Rafael RODRIGUEZ-AGUILERA @harry-brennan.bsky.social Severo Ochoa Postdoctoral Fellow at @CBM-CSIC-UAM.bsky.social. #Epigenetics, #Metabolism, #Liver, #VascularCell. PhD, #OrgullosamenteUNAM.
Twitter: @harry_brennan
Estef Vazquez @estefvazquez.bsky.social Such stuff that dreams are made of.
Ph.D. Candidate @LIIGH_UNAM
Interested in melanoma, immuno-oncology and spatial biology.
☕️🎸🎶
Austin Wang @austintwang.bsky.social Stanford CS PhD student working on ML/AI for genomics with @anshulkundaje.bsky.social
austintwang.com
Julio Saez-Rodriguez @juliosaezrod.bsky.social Computational Biologist, Head of research @ebi.embl.org, part-time
Heidelberg University, codirector DREAM challenges. For group's activities, see @saezlab.bsky.social
Mohamed.Abdelhalim @moha-abdelhalim.bsky.social 
GenomiqueENS @genomiqueens.bsky.social Genomics core facility of IBENS @ibensens.bsky.social - Ecole Normale Supérieure @normalesup.bsky.social - @psl-univ.bsky.social
#Nanopore #transcriptomics #SingleCellRNAseq #eucaryotes #low-input
website: https://genomique.biologie.ens.fr/
Georg Winter @georgwinter.bsky.social Chemical Biologist with passion for Cancer Research, Targeted Protein Degradation & Transcription.Scientific Founder of Proxygen & Solgate. Pats Fan. Dad.
winter-lab.com
Norwegian Centre for Molecular Biosciences and Medicine (NCMBM) @ncmbm.bsky.social NCMBM, hosted at the University of Oslo, is an international research centre in interdisciplinary molecular biosciences and medicine research. NCMBM is the Norwegian node of the Nordic EMBL Partnership for Molecular Medicine.
www.med.uio.no/ncmbm/english
Morgane Thomas-Chollier @mthomaschollier.bsky.social 
Joana Pereira @joanampereira.bsky.social Biochemist turned computational biologist and inner astronaut navigating the vastness of the protein universe using 💻. Group leader at @vibai.bsky.social and kuleuvenuniversity.bsky.social🇧🇪 Previously in🇨🇭🇩🇪🇵🇹
🌌 https://pereiralab.sites.vib.be
Tharvesh L @tharv74.bsky.social Bioinformatics scientist
Yuvia @perez-rico.bsky.social Genomicist focused on big data analysis for drug discovery living in Basel • Passionate about gene regulatory mechanisms and multi-omics integration + art lover
Bioconductor @bioconductor.bsky.social Bioconductor: Free, open-source software for rigorous, reproducible biological data analysis with R. Join our diverse community of developers and data scientists.
https://bioconductor.org/
Jonas Paulsen @jonnings.bsky.social Bioinformatics, 3D genome, epigenetics, gene regulation, mechanobiology
Renee García-Flores @freneegf.bsky.social PhD Candidate @CSHL | Genomic Sciences @LCG-UNAM | https://reneegf.github.io/ | she/her | 🇲🇽
Christian Sohlenkamp @zehm.bsky.social 
Ragnhild Eskeland @ragnhildes.bsky.social Associate Professor @University of Oslo Norway. PI Centre for Cancer Cell Reprogramming. Focus on Chromatin and Epigenetics. Single cell in differentiation & cancer. www.chromatome.no @ragnhildes1 @eskelandlab github.com/eskelandlab cancell.medisin.uio.no
Stegle Lab @steglelab.bsky.social Our group develops and applies computational approaches to study molecular variations and their phenotypic consequence. We are part of DKFZ and EMBL.
Website: https://steglelab.org/
@joseutrilla.bsky.social @joseutrilla.bsky.social 
Jeff Vierstra @jeffvierstra.bsky.social Senior Investigator @ Altius Institute for Biomedical Sciences. Research: High-resolution mapping of chromatin structure & function. Fun: Mountain shenanigans and skiing turns all year. Seattle, USA/Patagonia Chilena (🇺🇸🇨🇱). http://vierstra.org
Paul Harrison @paulfharrison.bsky.social Bioinformatician at Monash University, Melbourne, Australia.
I also use mastodon: @pfh@mastondon.online
https://mastodon.online/@pfh
My homepage is:
https://logarithmic.net/pfh/
On Twitter I was: @paulfharrison
@ievarau.bsky.social @ievarau.bsky.social 
David Gfeller @dgfeller.bsky.social Fascinated by computational biology applied to cancer immune cell recognition
Ivan Berest @berest.bsky.social Hello ☁️💙✨ community!
Bioinformatician 👨💻🧬 Zaugg lab
Former member Kopf lab @ ETH Zurich
Previously PhD @EMBL Zaugg group
Passionate about chromatin, TFs and multiomics data analysis!
Favourite celltype: macrophages 👻
R/Bioconductor + Snakemake
The Fromm Lab @frommlab.bsky.social lab at @UiTNorgesarktis studying microRNAs, paleotranscriptomics, biosystematics with a fable for flatworms.
team: Vanessa, Anju, Yrin & Bastian
MirGeneDB, MirMachine, MirMiner (soon!)
Roza Berhanu Lemma @rozablemma.bsky.social 
ISCB RegSys COSI @iscb-regsys.bsky.social The ISCB Regulatory and Systems Genomics Community of Special Interest (RegSys COSI) focuses on computational methods for studying gene/systems regulation
http://cosi.iscb.org/wiki/RegSIG:Home
Ewan Birney @ewanbirney.bsky.social Director of EMBL-EBI. I have an insatiable love of biology. Consultant to ONT and Cantata (Dovetail)
Guido Barzaghi @guidobarzaghi.bsky.social NYU postdoc with Tsirigos and Aifantis labs.
Former EMBL Heidelberg PhD with Krebs and Zaugg labs.
Bruno Di Stefano @distefanolab.bsky.social The Di Stefano Lab. Post-transcriptional control of cell fate and oncogenesis. Associate Professor & Vivian L. Smith Chair @bcmhouston.bsky.social. Views my own.
https://distefano-lab.com
Alejandro Reyes @areyesq.bsky.social Data Scientist at Novartis. Alumni from LCG-UNAM, DFCI and EMBL.
Aziz Khan @khanlab.bio computational biologist interested in #generegulation, #cancer #genomics #epigenomics #openscience - https://khanlab.bio/
Teif lab @teiflab.bsky.social Teif lab at the University of Essex. We work on gene regulation in chromatin and applications to liquid biopsies, using approaches of genomics, biophysics, bioinformatics & AI. Our focus is nucleosomics, TF binding, CTCF, cfDNA. https://generegulation.org
Valentina Boeva @valboeva.bsky.social Computational Cancer Genomics Group
Mark Robinson @markrobinsonca.bsky.social statistical bioinformatics; canadian / swiss; #methodsmatter #rstats; open science advocate; grumpy towards prestige worshippers, excessive admin and bros; will sacrifice sleep for a sunrise.
https://robinsonlabuzh.github.io/
Ming Tommy Tang @tommytang.bsky.social Director of bioinformatics at AstraZeneca. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
Grab my new book https://divingintogeneticsandgenomics.kit.com/wtdt_bioinformatics
Julien Roux @julienroux.bsky.social Bioinformatician, Department of Biomedicine @ Uni Basel & Swiss Institute of Bioinformatics
Interested in bulk and single-cell omics, data analysis, experimental design, data visualization, R/Bioc, open science, EDI, etc 🧬 🖥️
Greifflab @victorgreiff.bsky.social Professor of Computational and Systems Immunology @UniOslo.
Cofounder & Director of Computational Immunology @imprintlabs.bsky.social
Daniela Witten @danielawitten.bsky.social dorothy gilford endowed chair and professor of statistics/biostatistics at university of washington, all views my own
Eric Fauman (he/him) @ericfauman.bsky.social GWAS whisperer.
It's usually the closest gene.
Executive Director, Integrative Biology, Internal Medicine Research Unit. Pfizer R&D. All views my own.
Also cats.
Benoit Ballester @benoitballester.bsky.social Bioinformatics researcher exploring the non-coding genome. Searching for enhancer secrets. Proudly affiliated with @Inserm and @TAGC_U1090.
Inigo Martincorena @imartincorena.bsky.social Scientist. Group leader at the Sanger Institute, Cambridge UK. Somatic mutation and selection in normal tissues, cancer and ageing.
Hamed Najafabadi @hsnajafabadi.bsky.social Associate Professor at McGill University. Gene regulation, genomics, and bioinformatics. https://csg.lab.mcgill.ca/
Evangelia Petsalaki @epetsalaki.bsky.social Group Leader at EMBL-EBI. Our group uses interdisciplinary approaches including network analysis, omics integration and mathematical modelling to study the context specific regulation of human cell signalling.
nf-core @nf-co.re A community effort to collect a curated set of analysis pipelines built using Nextflow.
Dr Simone Kotva @simonekotva.bsky.social Philosopher and theologian. Author of Effort and Grace: On the Spiritual Exercise of Philosophy http://tinyurl.com/yc86gzlf. Currently writing a book on mysticism and plant-thinking.
Thomas Lin Pedersen @thomasp85.com Visualisation and graphics @posit.co
Classic Generative Art Weirdo using 🖤 and R: http://thomaslinpedersen.art and http://deca.art/thomasp85
he/him
Nuria Lopez-Bigas @nlbigas.bsky.social ICREA Research Professor at IRB Barcelona. Working on computational cancer genomics. Leading @bbglab.bsky.social
http://bbglab.irbbarcelona.org
Eileen Furlong @eileen-furlong.bsky.social Head of Genome Biology Dept @EMBL,
Scientist, Principal investigator, Professor
Exploring genome regulation during development,
and everything to do with enhancers.
3D genome, chromatin topology,
cell_fate, embryonic Development,
Single Cell genomics
Daniel Osorio @dcosorioh.bsky.social 🇨🇴 Colombian | Single-Cell Transcriptomics | Gene Regulatory Networks | Data Mining | dosorio.github.io
Surag Nair @suragnair.bsky.social Machine learning and genetics @Genentech. Previously CS PhD @Stanford.
suragnair.github.io
Maxime U Garcia @maxulysse.github.io Bioinfomagician/PhD in Bioinformatics, developing @nextflow.io @nf-co.re pipelines
Posts and RPs in English/French - He/him
Phil Ewels @ewels.bsky.social 🧬 Scientist (bioinformatics / genomics), 🧑🏻💻 software developer, 🪴 community builder.
Product Manager for open source @seqera.io
Carmen Sandoval-Espinosa 🧠 @carmeyeii.bsky.social 🧬🔬🧫 Building cool tools to study neurodegeneration. Genentech.
Sten Linnarsson @sten.linnarsson.org Professor of molecular systems biology at Karolinska Institutet, Sweden. On a mission to delete brain cancer using DNA therapy. Email: sten.linnarsson@ki.se
Fabian Theis @fabiantheis.bsky.social Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Jason Buenrostro @jbuenrostro.bsky.social Epigenetics & Genomics
Harvard University & Broad Institute
https://www.macfound.org/fellows/class-of-2023/jason-d-buenrostro
buenrostrolab.com
John Quackenbush @johnquackenbush.bsky.social Father, husband, scientist, professor, martial artist, scuba diver (in about that order).
Mariana Escobar Rodríguez @mescobar.bsky.social 🇲🇽
Entusiasta del pan dulce.
PhD student at the Microbial Paleogenomics Unit of the Pasteur Institute 🇫🇷.
Interested in human population genetics and pathogen evolution.
Arjun Raj @arjunraj.bsky.social Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. http://rajlab.seas.upenn.edu https://rajlaboratory.blogspot.com
Milena Pavlović @milenapavlovic.bsky.social Postdoc at the University of Oslo | machine learning, simulation, causal inference, bioinformatics, adaptive immunity
https://www.mn.uio.no/ifi/english/people/aca/milenpa/index.html
Manolis Kellis @manoliskellis.bsky.social 
Lior Pachter @lpachter.bsky.social Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Yves Clément @yvesclement.bsky.social Assistant Prof @ U-Paris-Cité | Institut Jacques Monod
Molecular evolution and bioinformatics (and some other things, too)
Stephen Turner @stephenturner.us FIeld guide. Quartermaster. Associate Professor and Research Dean at UVA School of Data Science. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Michael Eisen @mbeisen.bsky.social Nematode antagonist
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
Constantin Ahlmann-Eltze @const-ae.bsky.social Scientist at Isomorphic Labs. Previously at UCL and EMBL working with Wolfgang Huber. Biology, ML, Python, R, cancer immunology
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Pau Badia i Mompel @paubadiam.bsky.social Postdoctoral researcher at @anshulkundaje.bsky.social Machine learning #ML, gene regulatory networks #GRN, single cell and spatial #omics.
Previously at @saezlab.bsky.social
Core developer of https://decoupler.readthedocs.io/ at @scverse.bsky.social
Hadley Wickham @hadley.nz R, data, 🐕, 🍸, 🌈. He/him.
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Anthony Mathelier @amathelier.bsky.social Computational biologist interested in gene expression regulation.
Associate Director and Group Leader at Norwegian Centre for Molecular Biosciences and Medicine, University of Oslo, Nordic EMBL Partnership for Molecular Medicine.
https://mathelierlab.com
Laura Cantini @cantinilab.bsky.social PI of the machine learning for Integrative genomics lab @pasteur.fr and @CNRS.bsky.social
#NewPI #DiversityEqualityInclusion
Single-cell, multi-omics, machine learning
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Maxim Greenberg @maxvcg.bsky.social Group leader at Institut Jacques Monod. When I say "epigenetics" what I really mean is "DNA methylation".
www.maximgreenberglab.com- S Sushmita Roy @sroyyors.bsky.social Regulatory genomics, machine learning, networks, systems biology, evolution
Arnaud Krebs @arnaudkr.bsky.social Group leader at EMBL Heideberg
https://www.embl.org/groups/krebs/