A. baumannii @acinetobacter-amr.bsky.social Taxonomy ID: 470
https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=info&id=470
Elisa Sosa @elisasosa.bsky.social PhD candidate in Medical Microbiology, University of Zurich | AMR evolution in the gut microbiome
Aaron Weimann @aweimann.bsky.social Researcher at Uni Cambridge working on bacterial evolution and AI
Alex Crits-Christoph @acritschristoph.bsky.social Computational microbiologist
I like to post about: microbial genomics, microbial ecology, evolution, micro+plant biotechnology, climate, symbiosis, virology, ag, sci publishing and policy
Irish Coleen Asin @icaasin.bsky.social PhD student at UTokyo
๐ง curiosity-driven
๐งฌ๐ฆ๐ฆ here for the viruses, mosquitoes, and everything in between
Nadav Ben-Assa @nadavbenassa.bsky.social Postdoc @ Institut Pasteur - Bikard's lab - Computational & Synthetic Biology
PhD @ Technion - Geva-Zatorsky's lab - Gut microbiome & AMR
Nicole Lieberman, PhD @nicolelieberman.bsky.social Acting Assistant Professor of Lab Medicine at UW. Functional genomics and molecular epidemiology to study syphilis. ๐จ๐ฆ๐บ๐ธ
Michael Trinh @mctrinh.bsky.social Research Professor | Founder https://www.mindlinkor.com | https://github.com/mctrinh | https://x.com/_mctrinh | https://www.linkedin.com/in/mctrinh | ๐ป๐ณ ๐ฐ๐ท ๐ญ๐ฐ ๐ฎ๐น ๐บ๐ธ ๐ฏ๐ต
David Ma @frostickle.bsky.social Bioinformatician, Software Engineer, Systems Architect
I can help with: Data Architecture, HPC Infrastructure, Cloud Compute, Data Visualisation, UX, Monetisation (monetiseyourwebsite.com)
Prev: Garvan, Peter Mac, MCRI, AGRF
On Gadigal land, he/they
Zunair Khurram @zunairkhm.bsky.social PhD Student | Tonkin-Hill Lab
๐ฆ Computational Microbiology, Microbiome Metagenomics๐ฆ
Tim Downing @downingtim.bsky.social @downingtim@genomic.social - also downingtim.bsky.social - Head of #Genomics at The #PirbrightInstitute (UK). He/him. All posts (etc) are in a personal capacity. I log in regularly, nearly every month. #Andacyclist #genomics #virus #pathogen #evolution
@compbiosan.bsky.social @compbiosan.bsky.social
Australian BioCommons @ausbiocommons.bsky.social Enhancing Australiaโs digital life science research through world class collaborative distributed research infrastructure
www.biocommons.org.au
@abacbs.bsky.social @abacbs.bsky.social The Australian Bioinformatics and Computational Biology Society Inc. Promoting the science and profession of bioinformatics
https://www.abacbs.org
Isabel @isabelott.bsky.social Evolutionary & population biology of vector-borne viral disease systems. ๐ฆ genetics PhD candidate in NC.
Arbovirologist, orthobunyavirus wonk, feral reference librarian, & public health advocate. 80s mosquito. Coaster-sized earrings. (she/her) ๐ณ๏ธโ๐
Munazzah Maqbool @munazzahmaqbool.bsky.social PhD candidate at Peter Doherty Institute, University of Melbourne | interested in Pathogen Genomics | Antimicrobial Resistance | Public Health | One Health
David Cleary @bacterioskeptic.bsky.social Scientist (pathogen genomics). Husband, dad, music miserablist and egg chasing.
Margaret Lam @margaretlam.bsky.social Research Fellow at Monash University - microbial genomics, Klebsiella, Acinetobacter, plasmids
Willem van Schaik @wvschaik.bsky.social Microbiology, microbiome, antimicrobial resistance. Sometimes UK politics. Head of Research of the School of Infection, Inflammation and Immunology, University of Birmingham. Also Co-Director of @target-amr.bsky.social.
Eddie Holmes @eddieholmes.bsky.social Virus spotter. You're twistin' my melon man.
ARTIC network @artic.network Putting genomic surveillance at the heart of outbreak response. Funded by the Wellcome Trust and the Gates Foundation.
Prof Devi Sridhar @profdevisridhar.bsky.social Professor & Chair of Global Public Health, Edinburgh Uni. Certified Level 3 Personal Trainer. Views own.
Dr Roz Eggo @rozeggo.bsky.social Professor of Infectious Disease Dynamics.
Epidemiology. Modelling. Respiratory viruses. Vaccination. Electronic Health Records. Health Inequalities. Comorbidities. Open Science. Big Data. Policy support. Science Communication.
at LSHTM.
Run IDDjobs.org
Jackie Knee @jackieknee.bsky.social Associate Professor of Environmental Health and Microbiology at the London School of Hygiene & Tropical Medicine.
@kkranzer.bsky.social @kkranzer.bsky.social Professor Infectious Disease Epidemiology LSHTM; Co-director THRU-Zim at BRTI, LMU; Own views
Charlene Rodrigues @cmcrodrigues.bsky.social Infectious disease paediatrician | Assistant Professor microbial genomics | ID and bacterial genomics | Vaccine enthusiast | Public health genomics
https://www.lshtm.ac.uk/aboutus/people/rodrigues.charlene
London, UK
Ryan Teo @teojcryan.bsky.social Computational Biology PhD Student at the University of Birmingham. (Meta)genomic pathogen surveillance, infectious disease modelling, and BW disarmament. ๐ฌ๐ง/๐ธ๐ฌ
Pathoplexus @pathoplexus.org An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
pathoplexus.org
Harry Chown @chownbioinf.bsky.social Research Associate, Imperial College London ๐ Fungal genomics and bioinformatics
Alan McNally @alanmcn1.bsky.social Head of the School of Infection, Inflammation & Immunology @ Uni Birmingham. Proud Scot. Oversaw a few Covid PCR tests
Robert Petit @rpetit3.bsky.social Public health bacterial genomics, bioinformatic workflow development, and training. Bactopia (https://bactopia.github.io). @ Wyoming Public Health Laboratory
Dutchscientist (the real one) @dutchscientist.bsky.social Microbiologist @ Vet School, genomics/pathogens. Views, compliments and rants are my own. ORCID: 0000-0003-0203-1305. Am trying to avoid getting politics in my mentions, science and cats OK!
Josh Quick @scalene.bsky.social UKRI Future Leaders Fellow, University of Birmingham
Matt Loose @minomatt.bsky.social Sequencing, adapting and exploring genomes.
https://linktr.ee/matt.loose
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. ๐ฒโ๏ธ๐พ๐ฎ ๐ธ ๐งช ๐งฌ ๐ฅ ๐ฆ ๐๐๏ธ he/him.
https://bioinformer.substack.com
Finlay Maguire @finlaym.bsky.social Ast Prof CS+Epi at Dalhousie/Pathogenomics Bioinformatics Lead at Shared Hospital Lab (Sunnybrook): infectious disease genomic epidemiology (AMR/SC2/Zoonoses) & socially-focused collab data science (he/him)
Kai Blin @kblin.bsky.social Microbiology PhD, co-author of antiSMASH, Open Source geek, views are my own. @kblin@scholar.social
รine O'Toole @aineotoole.bsky.social Virus evolution, bioinformatics & phylogenetics. Researcher at University of Edinburgh.
Aldert Zomer @aldertzomer.bsky.social Associate Professor at Utrecht University, Infectious Diseases & Immunology. (meta)genomes, AMR, zoonotic pathogens. Cookie and cake connoisseur.
publications: https://scholar.google.com/citations?hl=nl&user=VHHhpoAAAAAJ&view_op=list_works&sortby=pubdate
Eva Heinz @evaheinz7.bsky.social Fighting mental health stigma and toxic research culture. Proud to support https://twloha.com/.
And when life gives you lemons, make a G&T.
She/Her
Martin Hunt @martibartfast.bsky.social Bioinformatician
Andries van Tonder @andriesvt.bsky.social Senior Teaching Associate/Research Associate in Genetics & Veterinary Medicine @ University of Cambridge
Jen Guthrie @jenlguthrie.bsky.social Assistant Prof @WesternU | Adjunct Scientist @PublicHealthON | Canada Research Chair in Pathogen Genomics and Bioinformatics | Epidemiology | TB | AMR | MRSA
@kevinlibuit.bsky.social @kevinlibuit.bsky.social
Helena, PhD ๐ณ๏ธโโง๏ธ @hexylena.bsky.social postdoc in clinical genetics. bioinformagician casting the spells that make the servers work ๐ง๐ช
https://orcid.org/0000-0001-9760-8992
The sanctioned action is to Cut. Hunting the good stuff. Better living through harm reduction.
she/they/ โ โ
Wytamma @wytamma.bsky.social Enjoying the little things like antibodies, ion channels and pip installs - technical biologist building tools and studying diseases โค๏ธ๐ข
Chris Kent @chris.primalscheme.com PhD student in the Quick Lab with @articnetwork.bsky.social
Jess Chen @drjesschen.bsky.social Mom, wife, birder, bike commuter, and microbial bioinformatician.
Geoff Winsor @glwinsor.bsky.social PhD candidate and database developer (bioinformatics, Pseudomonas Genome Database) at SFU. Exposome-microbiome interactions, data integration, bacterial genomics, genome annotation.
Mitchell Sullivan @mjsull.bsky.social Microbinfie
Theiagen Genomics @theiagen.bsky.social Transforming public health and infectious disease surveillance through the innovative implementation of #NGS and #bioinformatics technologies.
Sage Wright @sagewright.bsky.social Bioinformatics and cats
Kristian G. Andersen @kgandersen.bsky.social Infectious diseases & genomics. Immunologist in (voluntary) exile. Minimal sarcasm. Fierce HOA (Hater of Acronyms). Personal account - opinions expressed are my own and not those of my employer.
Cornelius Roemer @corneliusroemer.bsky.social Studying SARS-CoV-2 evolution @nextstrain @biozentrum
Studied Physics @Cambridge Uni, then learned about computers
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Chaoran Chen @chaoranchen.de Scientific software engineer at ETH Zurich, founder of GenSpectrum.org, co-founder of Pathoplexus.org, always looking for recommendations for board games ๐ฒ and books ๐
Gerry Tonkin-Hill @gerrythill.bsky.social Group leader at Peter Mac & the Doherty Institute in Melbourne, Australia
microbial genomics, statistics, machine learning
Liz Batty @lizbatty.bsky.social Crisp-loving nerd and swim headphones influencer. Bioinformatician and molecular microbiologist focused on tropical diseases. Live in Bangkok, do a podcast, drink coffee, go to the beach.
Adam Witney @aawitney.bsky.social Reader in Bioinformatics. Interested in infectious diseases, bioinformatics and genomics- K karinlag.bsky.social @karinlag.bsky.social
Dr. Kelly O. @drkfo.bsky.social Chief Scientist for Next-Generation Sequencing & Bioinformatics at The Utah Public Health Laboratory
๐ SEQUENCE ALL THE THINGS! ๐
I oversee all the sequencing and data analysis for infectious disease pathogens for the state. All opinions are my own!
Kelsey Florek @k-florek.net Infectious Disease Genomics and Data Scientist @ Wisconsin State Laboratory
#publichealth, #genomics, #infectiousdiseases, #openscience, #opendata
Personal account, art and opinions are my own.
Sean Skunk-Cabbage (Chou-Puant) โ @moldybasil.bsky.social Distressed of Conscience
Biking, walking, and taking the bus in Providence Rhode Island | Dense housing advocate | I think about plywood boats and mushrooms he/him
Ask me about systematics or plant diseases
Andrew Rambaut (๐๐) @arambaut.bsky.social Virus evolution | genomic epidemiology| virus origins | phylogenetics | BEAST | ARTIC Network
University of Edinburgh
http://beast.community
http://artic.network
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Jessica Blair @jessicamablair.bsky.social Professor of Antimicrobial Resistance. Institute of Microbiology and Infection, University of Birmingham. Director University of Birmingham Doctoral School. Editor in Chief of npj Antimicrobials and Resistance. - M Meera Chand @meerac.bsky.social Infectious diseases, microbiology, virology, public health and particularly emerging infections & genomics @UKHSA
Luis Pedro Coelho @luispedrocoelho.bsky.social Content creator for Elsevier, NPG, and others
Microbiome researcher
Based in Brisbane
Chris Fields @cjfields.bsky.social Microbiologist turned computational biologist
Bioinformatics Core Director, HPCBio
Open Bioinformatics Foundation Board Member
#metagenomics #microbiome #pangenomics
#python #r (yeah yeah, and #bioperl)- A Angie Hinrichs @angieshinrichs.bsky.social Working on the UCSC Genome Browser since 2002, SARS-Cov-2 phylogenetics since 2020. Opinions my own not employer's. she/her
Fiona Brinkman @fionabrinkman.bsky.social Microbe-loving bioinformatics and genomics professor aiming to better control infectious diseases, and support health, in a sustainable way. Also a Mum.
Bede Constantinides @bede.im Research fellow at the University of Birmingham interested in infectious disease informatics. Also cycling, photography, active travel. https://bede.im
Nicole Wheeler @nwheeler443.bsky.social
Peter Menzel @pmenzel.bsky.social Bioinformatics Scientist at Labor Berlin | Clinical Bioinfo | menzel.tech | github.com/pmenzel | โค๏ธ#rstats
Abraham Gihawi @abrahamgihawi.bsky.social UEA Research Fellow - Bioinformatics - Cancer (meta)genomics since 2017.
Opinions are mine alone.
Scott V. Nguyen @scottnguyen.bsky.social I study cells and love watching supercells. Senior biocurator at the ATCC.
Segata Lab @cibiocm.bsky.social The Laboratory of Computational Metagenomics led by Nicola Segata
**We are hiring, get in touch if interested!**
http://segatalab.cibio.unitn.it/
Moderator @svetlanaup.bsky.social
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health ๐งฌ๐ฆ ๐
Associate Professor of Computer Science, Rice University ๐ฆ๐ป
Treangen Lab website: www.treangenlab.com
Verity Hill @viralverity.bsky.social Wellcome ECA Fellow at the Centre for Virus Research, University of Glasgow
Phylodynamics for public health
https://viralverity.github.io
She/her
Oliver Schwengers @oschwengers.bsky.social ๐ฆ ๐งฌ๐ฅ๏ธ Microbial bioinformatics PostDoc
@JLUGiessen, WGS bacteria, plasmids, software/pipeline developer, father of 2, husband, astrophotographer
Langridge Lab @langridgelab.bsky.social Dr Gemma Langridge's bacterial niche adaptation lab group based @quadraminstitute.bsky.social
Gemma Langridge @gemma-langridge.bsky.social Microbiologist group leader (@langridgelab.bsky.social) at the Quadram Institute, mum to two, dark chocolate addict. She/her
Tim Read @timothyread.bsky.social Professor, Emory University Schools of Medicine, Atlanta.
Microbiology, genomics, genetics, bioinformatics.
https://scholar.google.com/citations?user=XF5C7cgAAAAJ&hl=en
Timi Adediran @timi-the-epi.bsky.social -Post-doctoral fellow at University of Michigan
-Interest in hospital epidemiology, health disparities, antibiotic-resistant pathogens, infection control and genomic epidemiology
Vishnu Raghuram @vishnu-raghuram.bsky.social Interested in studying evolution and transmission of pathogens using genomics and bioinformatics. Postdoc @ Umea University
MIMS | SciLifeLab | IceLab
๐งฌ๐ฅ๏ธ๐ฆ
https://scholar.google.com/citations?user=THTeHfgAAAAJ&hl=en
Eleanor Hayles @eh-hayles.bsky.social PhD candidate investigating genomic epidemiology of SARS-CoV-2 & STEC at the Quadram Institute with @langridgelab.bsky.social ๐งฌ๐ฆ ๐ฉ๐ปโ๐ป | she/her
Matt Parker @bioinfomatt.bsky.social Director, Clinical Bioinformatics Software at Oxford Nanopore in the EPI2ME team. Interested in regulated application of Nanopore sequencing. Also bikes, beers, trains, and the American Office.
Ezgi Ozkurt @ezgio.bsky.social #microbiomes #metagenomics #microbialecology #cinema #boardgames #women,life,freedom
Francesc Coll @fcic.bsky.social Computational biologist interested in bacterial genomics, bacterial adaptation and antibiotic resistance. @IBV_CSIC
Kat Steinke @microbiologikat.bsky.social They/them. Microbiologist/bioinformatician (MSc) working at Odense University Hospital, quadball player, all-around nerd. Chronically unable to stick to one language. Opinions, terrible puns etc. all my own
Evangelos Mourkas @evanmou.bsky.social Microbial genomics | Public Health | Antimicrobial Resistance
Researcher in infectious diseases @ Uppsala Hospital @ Uppsala University
https://www.uu.se/en/contact-and-organisation/staff?query=N14-2202
Luisa Hugerth @luhugerth.bsky.social Assistant professor in microbiology. Dance, puns and kids. ๐ง๐ท๐ธ๐ช
More microbe and science focus on @h-mel.bsky.social
More kids and making fun of me from the better half, @wickan.bsky.social
Samuel Lampa @smllmp.bsky.social Fascinated by Living Systems | Clin Micro Bioinfo @ Karolinska | PhD http://pharmb.io | Reproducibility, #SciWorkflows | Curious: Genomic Algos, TEs
R&D: livingsystems.cc
Thinking: livingsystems.substack.com
Married. Dad. Sinner saved by grace.
Sam Wilkinson @biowilko.bsky.social Bioinformatician, CLIMB-TRE dev, CLIMB-COVID admin. Likes food, movies, music, and writing code.
He/Him.
Rachel Colquhoun @rmcolq.bsky.social Bioinformatics for metagenomics and viral sequence data
Tue Sparholt Jรธrgensen @tuesparholt.bsky.social
Ed Cunningham-Oakes @edcoakes.bsky.social ๐ Liverpool
๐จ๐พโ๐ป Bioinformatics and EDI
๐ญ Microbiome and Genomic Diagnostics
๐๐พโโ๏ธ Powerlifter
Views and typos my own
Lars Barquist @lbarquist.bsky.social Assistant prof @ UofT, associated scientist @ Helmholtz Institute for RNA-based Infection Research. Pathogen systems biology / informatics / functional genomics. Coastal New Hampshirite. Drink Moxie.
@iruka-okeke.bsky.social @iruka-okeke.bsky.social
Leighton Pritchard @widdowquinn.bsky.social Computational biologist. Views/opinions mine, not my employer's. Repost != agreement. Not green, just pleasant. Fabian. =๏นฅรท
I canโt see DMs because of the Online Safety Act.