Yaron Orenstein @yaronorenstein.bsky.social Associate Professor in Computer Science and Life Sciences at Bar-Ilan University
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Richard Durbin @richard-durbin.bsky.social Computational and evolutionary genetics professor at the University of Cambridge, and Associate Faculty at the Wellcome Sanger Institute. Open access genomes, at scale, for all of life.
Matthew Nguyen @mnguyen667.bsky.social PhD student in the Schatz lab @ Johns Hopkins University
Sebastian Wild @sebastianwild.bsky.social Head of Algorithms Group at University of Marburg
www.wild-inter.net
Antoine Limasset @npmalfoy.bsky.social CNRS researcher in bioinformatics
Lille, France (Bonsai team).
I develop efficient computational methods to analyze massive sequencing data, creating scalable tools for genomics, transcriptomics, and metagenomics.
https://malfoy.github.io/
Samuel King @samuelhking.bsky.social Stanford Bioengineering PhD candidate / Biological AI in Brian Hie’s lab at Arc Institute
https://samuelking.cargo.site
Igor Martayan @imartayan.bsky.social PhD in algorithmic bioinformatics at @bonsaiseqbioinfo.bsky.social.
Interested in space-efficient data structures, sketching algorithms & high-performance computing
https://igor.martayan.org
Albert Vilella, PhD. @albertvilella.bsky.social Bioinformatics Scientist / Next Generation Sequencing, Single Cell and Spatial Biology, Next Generation Proteomics, Liquid Biopsy, SynBio, AI/ML in biotech // http://albertvilella.substack.com
Kuan-Hao Chao @kuanhaochao.bsky.social Senior Deep Learning Scientist Illumina | CS PhD candidate at CS PhD student at @jhu.edu @jhucompsci.bsky.social
Teaching machines to learn biology 🧬💻
https://khchao.com/
Karel Břinda @brinda.eu ‖ Permanent Researcher / INRIA Start. Faculty @ INRIA Rennes 🇫🇷 ‖
BioInfo/CompBio: algorithms, genomics, pathogens & rapid diagnostic of antibiotic resistance《 https://brinda.eu | https://github.com/karel-brinda 》
David Koslicki @david-koslicki.bsky.social Assoc. Prof. of Computer Science, Biology, and the Huck Institutes of the Life Sciences. Algorithms for sequence analysis, probability, knowledge graphs, and dabbling in ML/AI
PacBio @pacbio.bsky.social Our mission is to enable the promise of genomics to better human health by creating the world’s most advanced sequencing technologies.
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Páll Melsted @pmelsted.bsky.social Professor @hi.is in CS, head of rna seq data analysis at decode genetics (views are mine). Bioinformatician, epistemic trespasser, &c.
ps. I hate GTF files
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Jarno N. Alanko @jnalanko.bsky.social Postdoc in computer science and bioinformatics from Finland. Website: https://jnalanko.net. Various writings in English and Finnish: https://blog.jnalanko.net. Also on Mastodon: https://genomic.social/@jnalanko
Jouni Sirén @jltsiren.bsky.social Researcher at UCSC Genomics Institute. Space-efficient data structures and pangenome graphs.
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Stephen Hwang @stephenhwang.bsky.social Debugging wet code 💻🧬
@XDBio, JHMI; Langmead Lab
Mao-Jan Lin @maojanlin.bsky.social PhD student in JHU Computer Science studying compbio
Alex Sweeten @alexsweeten.bsky.social PhD student in computational genomics at JHU Phillippy & Schatzlab
🛰️ 🧬🇨🇦
Mohsen Zakeri @mohsenzakeri.bsky.social Postdoctoral Fellow at Johns Hopkins University, Computational Biology ❤️
www.mohsenzakeri.com
Jessica Bonnie @jessicabonnie.bsky.social PhD Candidate in Computational Genomics at Johns Hopkins University. You can dance however you want if you pretend like you are being ironic.
Omar Ahmed @oahmed.bsky.social
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Bohan Ni @bohanni.bsky.social PhD student in CompSci, Johns Hopkins University. I try to find rare and common variants with impacts on traits/health.
Benedict Paten @benedictpaten.bsky.social Professor of Biomolecular Engineering at the University of California, Santa Cruz; Associate Director, UC Santa Cruz Genomics Institute
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health 🧬🦠🔎
Associate Professor of Computer Science, Rice University 🦉💻
Treangen Lab website: www.treangenlab.com
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/- P Paul Medvedev @pashadag.bsky.social Algorithmic Bioinformatics Researcher and Teacher. Posts about research results and educational/mentorship topics (for details, see http://bit.ly/380vX22).
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Sina Majidian @sinamajidian.bsky.social Hiring PhDs/Postdocs CGRLab.github.io | Assistant Professor, Data Science and AI division, Chalmers & University of Gothenburg| SciLifeLab | Formerly at JHU-Langmead, UNIL-Dessimoz, WUR
Karen Miga @khmiga.bsky.social Associate Professor of Biomolecular Engineering at the University of California, Santa Cruz; Associate Director, UC Santa Cruz Genomics Institute
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Nae-Chyun Chen @naechyun-chen.bsky.social A computer guy who finds biology & genomics amazing. I work at Exai Bio.
Dr. Jean Fan @jef.works Associate prof comp biologist @JHUBME. Founder @cuSTEMized. Editor @PLOSCompBiol. Alum @HarvardDBMI @blairmagnet. Doing art like a science, science like an art.
markus @markusjsommer.bsky.social PI, Bioinformatics, NBACC
Previously: Johns Hopkins Center for Computational Biology
Alexis Battle @alexisbattle.bsky.social Professor at Johns Hopkins Biomedical Engineering and CS, Director Malone Center for Engineering in Healthcare, Research Director (Strategy and Partnerships) Data Science and AI Institute
Winston Timp @timp0.bsky.social timplab.org
Adele Valeria @adelevaleria.bsky.social PhD student interested in computational immunology | Karchin Lab, Johns Hopkins | University of Edinburgh and Zhejiang University alum | #FirstGen | Indonesian | adelevaleria.substack.com
Li Song @mourisl.bsky.social 毛利元光. Assistant Prof at the Department of Biomedical Data Science at Dartmouth College. Research on bioinformatics, algorithms. Lab page: mourisl.github.io
Adam M Novak @adamnovak.graphs.vg Bioinformatics Programmer at @ucscgenomics.bsky.social working on #pangenomics.
http://orcid.org/0000-0001-5828-047X
JHU Computer Science @jhucompsci.bsky.social A diverse and collaborative community on the cutting edge of computing and technology within hopkinsengineer.bsky.social at the Johns Hopkins University.
cs.jhu.edu • Baltimore, MD- L Heng Li @lh3lh3.bsky.social Associate Professor
DFCI & HMS
Rayan Chikhi @rayanchikhi.bsky.social
Ragnar {Groot Koerkamp} @curiouscoding.nl Postdoc on high troughput bioinformatics @ KIT Karlsruhe;
IMO, ICPC, Xoogler, Rust, road-cycling, hiking, wild camping, photography
Giulio Ermanno Pibiri @jermp.bsky.social Associate Prof. of CS at Ca' Foscari University of Venice. Indexing, Data Compression, Algorithms.
Vikram Shivakumar @vikramshivakumar.bsky.social PhD Student @ JHU Langmead Lab
Bluesky @bsky.app official Bluesky account (check username👆)
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