Pathoplexus @pathoplexus.org An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
pathoplexus.org
Ben Goldfarb @bengoldfarb.bsky.social Independent conservation journalist writing a book about fish. Author of CROSSINGS, on #roadecology, and EAGER, on beaver belief.
Ecologistas en Acción de Madrid @madrid.ecologistasenaccion.org
Louise H. Moncla @lhmoncla.bsky.social Assistant Professor of Pathobiology at the University of Pennsylvania. We use trees to study RNA virus evolution and transmission, with a focus on avian influenza. viruses, sequencing, phylogenetics, pop gen. She/her
https://lmoncla.github.io/monclalab/
Evan Torner @guyintheblackhat.bsky.social Associate Professor of German, Niehoff Professor of Film & Media Studies at U of Cincinnati; Scholar of East German cinema, science fiction, and role-playing games. He/Him. Bi. Wears a hat.
Linden A. Lewis 🐈⬛ @lindenalewis.bsky.social Publishers Weekly bestselling author 📚 Nonbinary queer writer (she/they) ⚔️ Rep’d by Hannah Bowman 💫 The First Sister trilogy out now! 🇺🇸➡️🇪🇸
Biogeografía y Cambio Global @ MNCN @mncn-bgcg.bsky.social Page managed by the Biogeography and Global Change Department/Group at the National Museum of Natural Sciences (CSIS) in Spain.
Carsten Rahbek @carsten-rahbek.bsky.social Professor in Biodiversity & Director of Center for Macroecology, Evolution & Climate (CMEC) and Villum Center for Global Mountain Biodiversity. Globe Institute. University of Copenhagen. https://macroecology.ku.dk/
CMEC @macroecology.bsky.social Center for Macroecology, Evolution and Climate (CMEC)
Elucidating biology's laws of nature since 2010 🌎🐦🧬
📍Globe Institute | University of Copenhagen
🔗 https://macroecology.ku.dk/
Simon Cauchemez @scauchemez.bsky.social Professor of infectious disease epidemiology and modelling at Institut Pasteur, Paris. Transmission, epidemic dynamics and forecasting, seroepidemiology, vaccines and NPIs, respiratory and vector born diseases, zoonoses, Public Health. #IDSky
Mircea T. Sofonea @mtsofonea.bsky.social 🦠 Epidemiologist @umontpellier.bsky.social & Nîmes Univ Hosp (FR).
Research head of @institutexposum.bsky.social.
🔎 respiratory viruses, emerging infectious diseases, pandemic preparedness. #EpiSky #IDSky
www.linkedin.com/in/mircea-t-sofonea-20b91b77
Kelly Charniga @kcharniga.bsky.social Infectious disease epidemiologist/modeler
NetScience @netscience.bsky.social Reader in Applied Mathematics at Queen Mary University working on Network Science, Data Science, and digital Epidemiology. Website: www.nicolaperra.com
Daniel Citron @dtcitron.bsky.social Applied mathematics for epidemiology | Infectious disease modeling | Digital data for health | HIV | Malaria
Opinions my own
Esther van Kleef @esthervk.bsky.social Infectious disease epidemiologists working on AMR, modelling and ID surveillance @WHO and UoOxford. Alone we move fast, together we move mountains
Sara Loo @loosaraliyen.bsky.social Infectious disease modeler and evolutionary dynamics enthusiast.
Andrei R. Akhmetzhanov (吳亞克) @aakhmetz.bsky.social Math Epi, infectious diseases at National Taiwan University College of Public Health
Juliana Taube @julianataube.bsky.social phd candidate @ georgetown • aspiring infectious disease modeler • she/her
jtaube.github.io
Joel Dyer @joelnmdyer.bsky.social AI/ML Scientist
Website: https://joelnmdyer.github.io
GitHub: https://github.com/joelnmdyer
Roberto Kraenkel @robertokraenkel.bsky.social Mathematical Biology. Modeling of infectious disease dynamics. Drivers of dengue epidemics. Theoretical Ecology. Professor at São Paulo State University, Brazil.
Rafa Lopes @rafalpx.bsky.social Researcher on drivers of epidemic dynamics
Postdoc at @nathangrubaugh.bsky.social & @colincarlson.bsky.social labs
I like maps!
S Otto @sarperotto.bsky.social evolution & math = a super interesting job
Francesco Di Lauro @francescodilauro.bsky.social Postdoc in infectious disease modelling, big data institute, University of Oxford
Michael Plank @michaelplanknz.bsky.social Professor of Applied Mathematics at the University of Canterbury, NZ. Fellow @royalsocietynz.bsky.social. Math modelling in biology and epidemiology. Bicycles make the world a better place. He/him
https://www.math.canterbury.ac.nz/~m.plank/
Billy Quilty @bquilty.bsky.social Infectious disease epidemiologist and modeller postdoc based at Charité Universitätsmedizin Berlin, honourary LSHTM | PhD LSHTM | MSc Imperial College London | Twitter: @BQuilty
Brandon Hayes @brandonhayes.bsky.social Researching infectious disease emergence dynamics, somewhere between epi stats and math @INRAE-ENVT || Enthusiast of record shops, bookstores, and cafes, especially if there's a cat || Team oxford comma, even more team em-dash.
Leo Bastos @leosbastos.bsky.social Public health researcher at Fiocruz 🇧🇷
Associate professor at IMPA Tech 🇧🇷
Bayesian statistician 📈
Infectious diseases modeller 🦠🦟
Father of 3 boys (be nice).
Iacopo Iacopini @iaciac.bsky.social #ComplexNetworks · #ComplexSystems · #Cities
Associate Professor @ Network Science Institute, Northeastern University London.
Michelle Kendall @mishkendall.bsky.social Infectious disease epidemiologist at Oxford PSI. Working on vaccine trials for CEPI priority pathogens and Digital Contact Tracing, previously NHS COVID-19 app.
https://michellekendall.github.io/
David Hartley @hartleydm.bsky.social Mathematical epidemiologist working on complex systems, infectious disease, and public health.
Tjibbe Donker @tjibbed.bsky.social Infectious Diseases Modeller at University Hospital Freiburg, working on antibiotic resistance, hospital-acquired pathogens, and patient referral networks. www.tjibbedonker.nl
Sam Scarpino @scarpino.bsky.social Scientist. Director of AI + Life Sciences and Professor of Public Health, Health Sciences, & Computer Sciences at Northeastern University. External Professor at the Santa Fe Institute and Vermont Complex Systems Institute. scarpino.github.io
Isaac Florence @isaac-florence.bsky.social Head of Health Protection Intelligence, Systems, and Data @ UK Health Security Agency.
Infectious Disease Epidemiologist, Civil Servant, Global health person
https://www.linkedin.com/in/isaacflorence
Dr. Rowan Durrant @rowandurrant.bsky.social Postdoc at the University of Glasgow | virus phylogenetics and evolutionary modelling | she/her
Leon Danon @leondanon.bsky.social Epidemiologist, AI, mathematical modeller, networks at Bristol University. <3 techno. Director of the Jean Golding Institute.
Alison L Hill @alisonhill.bsky.social Fighting infections with math | Moved to Ecology & Evolutionary Biology @utoronto.ca | Formerly at @jhu.edu
Spencer J Fox @foxandtheflu.bsky.social Assistant prof at NAU in disease modeling, and data science. Posts are my own opinions
Kate Baker @ksbakes.bsky.social Prof @cambridgebiosci.bsky.social Connecting pathogen evolution with public health outcomes. #Shigella and #AMR enthusiast. Views own. http://gen.cam.ac.uk/baker-group also www.pdu.gen.cam.ac.uk also @pducambridge.bsky.social
Alexis Robert @alxsrobert.bsky.social Assistant Professor in Infectious Diseases Dynamics @ London School of Hygiene and Tropical Medicine; work on all things measles, especially interested in elimination and eradication of pathogens
Kylie Ainslie, PhD @kylieainslie.bsky.social Modelling for Policy Lead @thedohertyinst.bsky.social @unimelb.bsky.social | Crazy dog lady 🐶 🌈 (she/her)
🌐: https://kylieainslie.github.io/
Linkedin: https://www.linkedin.com/in/kylieainslie
The Warehouse: https://rwarehouse.netlify.app/
#rstats #rladies
Olly Clifton-Moore @ollycm.bsky.social UKHSA Director of Analysis and Intelligence Assessment. DfE lifer.
Kat Holt @katholt.bsky.social Scientist… pathogen genomics & antimicrobial resistance, computational biology & infectious disease epidemiology.
Co-Director LSHTM AMR Centre @lshtmamrcentre.bsky.social
holtlab.net | klebnet.org | typhoidgenomics.org | amr.lshtm.ac.uk
Natalie Linton @nlintonepi.bsky.social Infectious disease epidemiologist and modeler, AIxBio researcher.
Marius Gilbert @mariusgilbert.bsky.social Professeur ordinaire (ULB)
https://spell.ulb.be/person/marius-gilbert/
Vice-recteur à la recherche et à la valorisation
Vice-recteur à la culture et à la médiation scientifique,
Chroniqueur, Le Soir
https://www.lesoir.be/358546/dpi-authors/marius-gilbert- W @worobey.bsky.social @worobey.bsky.social
Graham Medley @grahammedley.bsky.social Father, grandfather,
infectious disease modeller.
Brother, husband,
Aspirant coffee gourmand
Alexei Drummond @alexeidrummond.bsky.social Professor of Computational Biology, University of Auckland. Atheist, Rock climber, Trail runner. Co-creator of BEAST1 and BEAST2. Founder of Geneious.
Hiroshi Nishiura @nishiurah.bsky.social theoretical epidemiologist
Pete Dodd @petedodd24.bsky.social Mathematical modelling for TB, infectious diseases, epi & pop health
David Aanensen @daanensen.bsky.social genomics, public health, the web, epidemiology and all the bits in between.- J Jeff Imai-Eaton @jeff-imai-eaton.bsky.social
Chadi Saad-Roy @chadisaadroy.bsky.social Assistant Professor at the University of British Columbia in the Department of Mathematics and the Department of Microbiology and Immunology
Interested in disease ecology and evolution, mathematical biology
https://chadisaadroy.wordpress.com
Benny Rice, PhD @bennyrice.bsky.social Disease ecologist especially interested in malaria and Madagascar. Postdoc at Princeton EEB
Stephen Kissler @skissler.bsky.social Infectious disease epidemiologist / computer science professor @ CU Boulder. Trying to figure out how to keep us all healthy and fed.
Quentin Leclerc @quentinlclrc.bsky.social Assistant Professor in public health | Infectious disease dynamics, health risks assessment & AMR | Conservatoire National des Arts et Métiers & Institut Pasteur 🖥️ 🦠
Flo Débarre @flodebarre.eurosky.social Personal account
Evolutionary biologist, senior scientist at CNRS/Sorbonne Université
Interests: origins and control of infectious diseases and conspiracy theories; diversity in science; scientific publishing
https://www.normalesup.org/~fdebarre/
EN & FR
The Ferrari Lab @theferrarilab.bsky.social Infectious disease epidemiologist, mathematical modeling ... and Lucy's person.
Director, Center for Infectious Disease Dynamics (@ciddpsu.bsky.social) at Penn State
theferrarilab.net
Gabriel Ribeiro dos Santos @gabribdsantos.bsky.social Postdoc researcher at Yale School of Public Health - Infectious diseases modelling - Spread and control of arboviruses 🏳️🌈🇧🇷🇫🇷
Thomas House @tah-sci.com Professor of Mathematical Sciences, working mainly on epidemiology although partial to a bit of non-commutative algebra, social science and basic biology.
https://personalpages.manchester.ac.uk/staff/thomas.house/about.html
Tom Churcher @thomaschurcher.bsky.social Infectious disease epidemiologist focussing on mosquitoes & other blood-suckers. Malaria. Prof @ Imperial College London @mrc-outbreak.bsky.social.
Joseph Lemaitre @josephlemaitre.bsky.social 👀 Developing novel infectious disease dynamics modeling approaches to inform public health policies
📍Assistant Professor at UNC-Chapel Hill (🇺🇸), PhD from EPFL (🇨🇭).
🌍 josephlemaitre.com
Ben Cooper @bugwonk.bsky.social Professor of infectious disease epidemiology at Centre for Global Health Research, Oxford. 🤓🧀☕️🚴🏼🦠💉💊
Dr Emma Hodcroft @firefoxx66.bsky.social Die Virenjägerin! 🏹🧬!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of CoVariants.org, co-founder of @pathoplexus.org
I like 🐈 & 🛫
@firefoxx66@mstdn.science
Sarah Cobey @cobey.bsky.social Professor at U. Chicago. Computational epidemiology, evolution, influenza, SARS-CoV-2, vaccines, and B cells. Infectious disease dynamics across scales.
Christian Althaus @calthaus.bsky.social Computational epidemiologist at the University of Bern 👨💻🦠 cyclist 🚴 citizen 🗳 - views are my own
Henrik Salje @hsalje.bsky.social Infectious Disease Epidemiologist at University of Cambridge
Megan O'Driscoll @meganodris.bsky.social Schmidt Science Fellow at the Geneva Center for Emerging Viral Diseases. Infectious disease epidemiology, serology & modelling
James Hay @jameshay.bsky.social Research Fellow at the Pandemic Sciences Institute, University of Oxford. Using maths and stats to understand infectious disease dynamics, mostly viral kinetics and serology. https://hay-idd.github.io/
Sam Abbott @seabbs.bsky.social Real-time infectious disease modelling. Developing methods for outbreak response, surveillance, and pandemic preparedness. samabbott.co.uk
Come join me on the epinowcast forum: https://community.epinowcast.org/latest
Noémie Lefrancq @noemielefrancq.bsky.social Phylogenetics 🧬 , infectious disease dynamics 🦠 & modelling 💻 #IDSky #IDModelling
Postdoctoral fellow @ETH Zürich (in Basel)
Previously @Cambridge_Uni and @institutpasteur
Chris Wymant @chriswymant.bsky.social Infectious disease epidemiology w stat/math modelling, genomics. Senior researcher at the Pandemic Sciences Institute, Oxford. Likes global & one health, sustainability; animals count too. Vegan, flyingless. Views own. https://github.com/ChrisHIV/teaching
Oscar Cortes-Azuero @ocortesazuero.bsky.social Infectious disease modelling. PhD student at the University of Cambridge
Chiara Poletto @chpoletto.bsky.social Assoc Prof University of Padova - network epidemiology, network physics, disease ecology, outbreak analysis
https://chiara-poletto.github.io/
Joshua Weitz @joshuasweitz.bsky.social Professor of Biology & Institute for Health Computing, U of Maryland; explores how viruses impact human & environmental health;
'Asymptomatic' (JHU Press - https://bit.ly/asymptomatic_book)
&
'Science Matters' (https://substack.com/@joshuasweitz)
Justin Lessler @justinlessler.bsky.social Faculty in Epidemiology at the UNC Gillings School of Global Public Health. Helps coordinate the COVID-19 Scenario Modeling Hub https://covid19scenariomodelinghub.org/
Dan Larremore @danlarremore.bsky.social Prof | CU Boulder BioFrontiers Institute + Computer Science | Santa Fe Institute | LarremoreLab.github.io
Founder | CevianLabs.io
Gytis Dudas @evogytis.bsky.social PI @ Vilnius University Life Sciences Center 🦠🧬🌳🌍🐾📈.
Enthusiast of orthomyxos (& other (-)ssRNA viruses), RNA virus discovery, evolution & ecology, genomic epidemiology, data-vis, matplotlib.
EMBO installation grantee.
evogytis.github.io
Eddie Holmes @eddieholmes.bsky.social Virus spotter. You're twistin' my melon man.
Marc Suchard @msuchard.bsky.social Striving to provide better evidence to improve health globally! Professor, Departments of Biostatistics, Computational Medicine and Human Genetics, UCLA
Maciej F Boni @maciekboni.bsky.social Professor of Biology, Temple University's Institute for Genomics and Evolutionary Medicine, Department of Biology, Sunny Philadelphia, USA
Dr Joel C Miller @joelcmiller.bsky.social Mathematical Biologist specializing in infectious diseases and network science.
Andrew Rambaut (🐏🎀) @arambaut.bsky.social Virus evolution | genomic epidemiology| virus origins | phylogenetics | BEAST | ARTIC Network
University of Edinburgh
http://beast.community
http://artic.network
Julian Parkhill @julianparkhill.bsky.social Researcher in pathogen genomics and evolution
University of Cambridge Vet School @camvetschool.bsky.social
https://pathgenevocam.github.io
Mattia Mazzoli @mattiamazzoli.bsky.social Populating the interactive namespace. Senior Research Scientist at ISI Foundation on Human mobility, Epidemiology, Network science, ABM and more
Sen Pei @senpei.bsky.social Asst Prof @ColumbiaMSPH. A mix of Infectious Diseases, Environmental Health, Network Science & Complex Systems. Views are my own.
Website: https://senpei-cu.github.io/
John M. Drake @jdrakephd.bsky.social Professor of Ecology at the University of Georgia. Views are my own.
http://jdrakephd.substack.com
Alain Barrat @alainbarrat.bsky.social Researcher. Works on complex systems, complex networks, interdisciplinary topics.
Loves cats, travels, Japan.
Foodie.- A Andrew Azman @andrewazman.bsky.social Infectious Disease Epidemiologist, University of Geneva
- N Nuno R. Faria @nfaria.bsky.social
Simon Dellicour @sdellicour.bsky.social F.R.S.-FNRS Research Associate at the University of Brussels (Spatial Epidemiology Lab - SpELL, https://spell.ulb.be/) and Visiting Professor at the University of Leuven (Evolutionary & Computational Virology lab, https://rega.kuleuven.be/cev/ecv)
Louise Dyson @drlouisedyson.bsky.social Associate Professor (Reader) at Warwick Uni interested in epidemiology and mathematical biology. Using stochasticity to help eliminate NTDs. (Pronouns: she/her) https://warwick.ac.uk/fac/cross_fac/zeeman_institute/staffv2/dyson/
Yonatan Grad @yhgrad.bsky.social Prof @ Harvard Chan School of Public Health, Director, Center for Communicable Disease Dynamics. Antimicrobial resistance, STIs, N. gonorrhoeae, pandemic preparedness/response, pathogen genomics, mathematical modeling, ID epi
Dr Edward Hill @edmhill.bsky.social Researcher in mathematical epidemiology & infectious disease modelling.
Affiliations: Civic Health Innovation Labs (CHIL) @livunichil.bsky.social, @thepandemicinst.bsky.social, @livuni-phps.bsky.social, @livuni-iph.bsky.social, @liverpooluni.bsky.social.
Timothée Vergne @timvergne.bsky.social Associate Professor of veterinary public health at the National Veterinary School of Toulouse #ENVT 🇨🇵
Epidemiologist and infectious disease modeller
Head of the @epidesa.bsky.social lab
🐔🐖🐮🦆🐗🦠💻
Hannah Slater @hannahslater.bsky.social Mostly malaria.
PATH, AMMnet.
Views expressed are my own
Rachel E. Baker @rebaker.bsky.social Assistant Professor of Environment and Society, and Epidemiology @BrownUniversity
rachelelizabethbaker.com
Steven Riley @stevenriley.bsky.social Infectious disease scientist at UKHSA and Imperial College
Cécile Tran Kiem @ceciletk.bsky.social Postdoc at Fred Hutchinson Cancer Center on mathematical modelling of infectious diseases, she/her.
Lourenço, J. @lourencojml.bsky.social Pathogen Population Biology Lab @ CBR/UCP, Lisbon, https://cbr.fm.ucp.pt/en/node/7111
Eco-epidemiology of mosquito-borne and antigenically variable pathogens.
Jonathan Dushoff @jdushoff.bsky.social Theoretical biologist, recreational mathematician, anti-fascist*.
* I had planned not to be political here, but when circumstances change, decisions sometimes have to change.