Jane Hawkey @yekwah.bsky.social Microbial genomics - bacterial evolution, AMR, mobile elements, phylogenetics. Located at Monash University/Alfred Hospital
Sanika Kulkarni @sanikakool.bsky.social
Harry Chown @chownbioinf.bsky.social Research Associate, Imperial College London 🍄 Fungal genomics and bioinformatics
Michael Payne @mjohnpayne.bsky.social Senior Research Fellow at University of Sydney.
Microbial genomics, Bioinformatics and Python!
Tom Stanton @tomstantonmicro.bsky.social Microbiologist. Lead developer of #Kaptive + bonafide #Klebsiella nerd. Post-doc in the Wyres Lab @AlfredMonash_ID.
@pha4ge.bsky.social @pha4ge.bsky.social
PfamDB @pfamdb.bsky.social The Pfam database is a large collection of protein families, domains and repeats. https://www.ebi.ac.uk/interpro/entry/pfam/#table
Nadya Doncheva @scaramonche.bsky.social
AnneWe @annewe.bsky.social Chocoholic. Bioinformatician. Geek. Scout. Bicyclist.
Kelly Wyres @kelwyres.bsky.social Computational microbiologist; genomics, metabolic modelling, Klebsiella, capsules, population biology. Toddler mum and wannabe pilates enthusiast.
Brad Langhorst @bwlang.bsky.social DNA and RNA sequencing methods enthusiast
email: brad at langhorst.com
Ruth E. Timme @ruthtimme.bsky.social Public health scientist in pathogen genomic surveillance . twin mama . botanist by training . birder . (tweets are my own)
Nick Sanderson @nickdsandy.bsky.social Bioinformatician interested in infection and immunity. Direct from sample sequencing for diagnostics. MMM group, NDM, Oxford University
Bérénice Batut @bebatut.bsky.social She/her. Bioinformatics. Microbiome 🦠. Open Science. Training. Mentoring. Galaxy. OLS. ELIXIR Microbiome Community. Mother
DefinitelyNotAlice @alicele.bsky.social Evolutionary scientists, curious epidemiologist, plasmid enthusiast, old school social!
Sardinian, Italian and European in the Uk.
Briton in training, loves BCN.
Mum. Baker. Birdwatcher. Gardener.
Very opinionated & opinions are my own.
Verity Hill @viralverity.bsky.social Wellcome ECA Fellow at the Centre for Virus Research, University of Glasgow
Phylodynamics for public health
https://viralverity.github.io
She/her
Chris Fields @cjfields.bsky.social Microbiologist turned computational biologist
Bioinformatics Core Director, HPCBio
Open Bioinformatics Foundation Board Member
#metagenomics #microbiome #pangenomics
#python #r (yeah yeah, and #bioperl)
Andrew Rambaut (🐏🎀) @arambaut.bsky.social Virus evolution | genomic epidemiology| virus origins | phylogenetics | BEAST | ARTIC Network
University of Edinburgh
http://beast.community
http://artic.network
Danny Park @dannyjpark.bsky.social I use genomics to study the evolution and spread of human pathogens and lead pathogen genomic analytics at the Broad Institute.
Also: @dpark@mstdn.science
ORCID: 0000-0001-7226-7781
GitHub: dpark01
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Theiagen Genomics @theiagen.bsky.social Transforming public health and infectious disease surveillance through the innovative implementation of #NGS and #bioinformatics technologies.
Wytamma @wytamma.bsky.social Enjoying the little things like antibodies, ion channels and pip installs - technical biologist building tools and studying diseases ❤️🐢
Sandra Reuter @sandrareuter.bsky.social Microbiology/Bacterial Genomics by day. Infection prevention & control. Interested in CRE/CPE, AMR, plasmids, and transmissions of bugs in all sorts of settings. Would do lots of things for cake. Starting to enjoy running. Internationalist.
Freiburg/German
Rob Kingsley @drrobkingsley.bsky.social Professor of Microbiology @uniofeastanglia and Group Leader @TheQuadram, Norwich, UK - genomics, AMR, host-pathogen interactions, phage, microbiome
Editor Communications Biology
Colman O'Cathail @colmanoc.bsky.social ENA Project Lead & Product Owner @ebi.embl.org | Bioinformatics services and infrastructure | @enasequence.bsky.social
Rachel Colquhoun @rmcolq.bsky.social Bioinformatics for metagenomics and viral sequence data
Rebecca A. Gladstone @becctococcus.bsky.social Microbial population genomics | opportunistic pathogen ecology | AMR, vaccines, and prevention. I study why some bacterial lineages move from colonisation to disease. UiO. Often outdoors in Norway.
Sam Horsfield @samuelhorsfield.bsky.social Postdoc @ University of Neuchâtel, Laboratory of Evolutionary Genetics 🦠 Working on methods to study pathogen evolution and epidemiology using pangenomics 🧬 https://samhorsfield96.github.io/my-website/ 🌐
Natacha Couto @natachacouto.bsky.social Scientist, One Health, AMR, Genomics
Bede Constantinides @bede.im Research fellow at the University of Birmingham interested in infectious disease informatics. Also cycling, photography, active travel. https://bede.im
Chaoran Chen @chaoranchen.de Scientific software engineer at ETH Zurich, founder of GenSpectrum.org, co-founder of Pathoplexus.org, always looking for recommendations for board games 🎲 and books 📚
Andy Pavlo @andypavlo.bsky.social Database Research @ ClickHouse
Associate Prof. of Databases @ Carnegie Mellon.
J. L. Westover @mrlovenstein.bsky.social My next book, FUN, hits Kickstarter Sept 22! Boop my bio link to get notified on launch day AND get a free glow-in-the-dark enamel pin!
🎉 mrlovensteinpresents.com
Ethan Mollick @emollick.bsky.social Professor at Wharton, studying AI and its implications for education, entrepreneurship, and work. Author of Co-Intelligence.
Book: https://a.co/d/bC2kSj1
Substack: https://www.oneusefulthing.org/
Web: https://mgmt.wharton.upenn.edu/profile/emollick
Ryan Wick @rrwick.bsky.social Bioinformatician at the Centre for Pathogen Genomics at the University of Melbourne
Nabil-Fareed Alikhan @happykhan.mstdn.science.ap.brid.gy Admin for @mstdn.science. #bioinformatician. Interested in #microbiology and #genomics.
🌉 bridged from ⁂ https://mstdn.science/@happykhan, follow @ap.brid.gy to interact
Anna Cusco @annacusco.bsky.social Microbiome scientist | Metagenomics | Long-read sequencing
Postdoc at Big Data Biology Lab
Samuel Lampa @smllmp.bsky.social Fascinated by Living Systems | Clin Micro Bioinfo @ Karolinska | PhD http://pharmb.io | Reproducibility, #SciWorkflows | Curious: Genomic Algos, TEs
R&D: livingsystems.cc
Thinking: livingsystems.substack.com
Married. Dad. Sinner saved by grace.
Paul Gardner @ppgardne.bsky.social Bioinformatics, RNA, benchmarking & educating to fund kayaking and fishing. Ōtepoti/Dunedin, Aotearoa/New Zealand. From Whāngārā.
@kevinlibuit.bsky.social @kevinlibuit.bsky.social
Tom Connor @tomrconnor.bsky.social Public health genomics and big computers working in Wales. Parent of two small children. Gamer, foodie, geek. Also likes cats. Views my own.
Pathoplexus @pathoplexus.org An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
pathoplexus.org
Keith Jolley @kjolley.bsky.social Bioinformatician in the Department of Biology, University of Oxford.
Working on microbial genomics | Developer of @PubMLST.org and BIGSdb | https://orcid.org/0000-0002-0751-0287
Helena, PhD 🏳️⚧️ @hexylena.bsky.social postdoc in clinical genetics. bioinformagician casting the spells that make the servers work 🧙🪄
https://orcid.org/0000-0001-9760-8992
The sanctioned action is to Cut. Hunting the good stuff. Better living through harm reduction.
she/they/ ▓ ▓
Sebastian Jaenicke @sjaenick.bsky.social bioinformatics, metagenomics, Unix/Linux. Possibly some cat content, and a strange taste of music.
Wei Shen 沈 伟 @shenwei356.bsky.social Associate professor of Bioinformatics at Chongqing Medical University, China. Lab: https://mbio.info
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Áine O'Toole @aineotoole.bsky.social Virus evolution, bioinformatics & phylogenetics. Researcher at University of Edinburgh.
Duncan MacCannell @drm.bsky.social Molecular #epidemiology & #publichealth. Pathogen #genomics, #microbiology, #emerginginfections, #AMR, (bio)tech #biosurveillance and #opendata.
Personal account. Opinions/dad jokes are my own.
🦅 Low productivity public sector employee.
🔬🦠🧬🖥️💉🌻🍩🐸🥪
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io- A Angie Hinrichs @angieshinrichs.bsky.social Working on the UCSC Genome Browser since 2002, SARS-Cov-2 phylogenetics since 2020. Opinions my own not employer's. she/her
netcup @netcup.bsky.social ▪️ hochwertige Dienstleistungen rund um die Bereitstellung und Betreuung von Webhosting-Accounts, Domains und Server
Oliver Schwengers @oschwengers.bsky.social 🦠🧬🖥️ Microbial bioinformatics PostDoc
@JLUGiessen, WGS bacteria, plasmids, software/pipeline developer, father of 2, husband, astrophotographer
Inês Mendes @inesmendes.bsky.social Senior Bioinformatics Scientist @ Theiagen Genomics
PhD in Microbial Bioinformatics
Rhys White @rhystwhite.bsky.social Scientist | Turning #Genomics into intelligence | Tracking pathogen evolution, diversity, & spread | Welsh expat in New Zealand | Formerly The University of Queensland
Arwyn Edwards @arwynedwards.bsky.social FLSW. Reader in Biosciences, Aberystwyth University. Likes cool microbes in warming places. Posts in personal capacity, etc.
Conor (Conchúr) Meehan @conmeehan.bsky.social Researching WGS/Epi/Taxonomy of pathogenic mycobacteria and evo of microbiomes. Irish-born, Nottingham-working. Call me Conchúr if you can pronounce it. He/They
https://www.ntu.ac.uk/staff-profiles/science-technology/conor-meehan
Kai Blin @kblin.bsky.social Microbiology PhD, co-author of antiSMASH, Open Source geek, views are my own. @kblin@scholar.social
Cornelius Roemer @corneliusroemer.bsky.social Studying SARS-CoV-2 evolution @nextstrain @biozentrum
Studied Physics @Cambridge Uni, then learned about computers
Sam Wilkinson @biowilko.bsky.social Bioinformatician, CLIMB-TRE dev, CLIMB-COVID admin. Likes food, movies, music, and writing code.
He/Him.
Gerry Tonkin-Hill @gerrythill.bsky.social Group leader at Peter Mac & the Doherty Institute in Melbourne, Australia
microbial genomics, statistics, machine learning
Dr Emma Hodcroft @firefoxx66.bsky.social Die Virenjägerin! 🏹🧬!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of CoVariants.org, co-founder of @pathoplexus.org
I like 🐈 & 🛫
@firefoxx66@mstdn.science
Theo Sanderson @theo.io researching viral pathogen genomics at @lshtm.bsky.social, building @pathoplexus.org | theo.io / sandersonlab.org
Olin Silander @osilander.bsky.social DNA
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Richard Sever @richardsever.bsky.social Chief Science and Strategy Officer, openRxiv. Co-Founder, bioRxiv and medRxiv.
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University 🇰🇷 | former Steinegger Lab @ SNU, Söding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Leo Martins (he/him) @leomrtns.bsky.social Computational Biologist. Tenure Track Fellow in Signal Processing for Health at the School of Engineering, University of Liverpool. 🇧🇷🇯🇵🇪🇸🇬🇧🇨🇭
Phylogenomics and Chemometrics. Prog Rock and Post-Punk. C and Python.
@leomrtns@mstdn.science
Phil Ashton @flashton.bsky.social Genomic epidemiologist at the Centre for Genomic Pathogen Surveillance at Oxford. How can microbial genomics improve health in high infectious disease settings?
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
George Bouras @gbouras13.bsky.social Bioinformatics @ Adelaide University
- phages, microbes and more
Devon Ryan @dpryan79.bsky.social An American in Germany, an ion channel guy in bioinformatics, a proponent of scientific skepticism in an irrational world.
@devon@genomic.social, @dpryan79 on twitter and github
Matthew Croxen @mcroxen.bsky.social public health 🦠 genomics | associate professor | personal account (opinions my own) | 🎸⚽📷♨️🥷 he/him. 🇨🇦 ✊🏿✊🏾✊🏽.
Robert Petit @rpetit3.bsky.social Public health bacterial genomics, bioinformatic workflow development, and training. Bactopia (https://bactopia.github.io). @ Wyoming Public Health Laboratory
Erin Young @erinyoung.bsky.social Public Health #Bioinformatician. Wants to sequence ALL THE THINGS. Personal account with alternative spellings and grammar structures. She/her
Marco Galardini @mgalactus.bsky.social Computational biologist with a taste for microbiology. Associate professor at Twincore, MHH and HZI
Wikipedia wanderer
Lab website: https://www.microbial-pangenomes-lab.org/
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Finlay Maguire @finlaym.bsky.social Ast Prof CS+Epi at Dalhousie/Pathogenomics Bioinformatics Lead at Shared Hospital Lab (Sunnybrook): infectious disease genomic epidemiology (AMR/SC2/Zoonoses) & socially-focused collab data science (he/him)
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Mitchell Sullivan @mjsull.bsky.social Microbinfie
Lee Katz @lskatz.github.io Co host of the Micro Binfie podcast
Internet Archive @archive.org Internet Archive is a non-profit research library preserving web pages, books, movies & audio for public access. Explore web history via the Wayback Machine.
Peter van Heusden (he/him) 🗿 @pvanheus.bsky.social #bioinformatics at @SANBI_SA, building bioinformatics workflows for (Pan-)African PH. health & justice! married. @pvanheus@mstdn.science
Bani Jolly @banijolly.bsky.social Scientist | Computer Science Engineer exploring the power of Genomics in healthcare | Jill of many, mistress of some
banijolly.github.io
Twitter: @bani_jolly