Politics In The Wild @politicsinthewild.bsky.social Slightly unserious.
Very leftist.
Sort of a Democrat.
Graham McVicker @grahammcvicker.bsky.social Associate Professor at the Salk Institute
#SingleCell preprints @prepub-singlecell.bsky.social feeds: biorxiv, medrxiv, arxiv.q-bio, arxiv.cs, arxiv.math, Research Square
regex: '(single(- )(cell|nuclei)|s[cn]RNA-seq)'
If you have suggestions, please get in contact with @willmacnair :)
Will Macnair @willmacnair.bsky.social Amateur neuroscientist, quite a bit of experience in single cell analysis, working on #neurodegeneration in Basel. Formerly postdoc with @markrobinsonca.bsky.social at UZH.
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Arjun Raj @arjunraj.bsky.social Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. http://rajlab.seas.upenn.edu https://rajlaboratory.blogspot.com
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Anne Carpenter @drannecarpenter.bsky.social Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
David A Knowles @davidaknowles.bsky.social machine learning and functional/statistical genetics. Associate Prof @Columbia and Core Faculty @nygenome. he/him/his. https://daklab.github.io/
bioRxiv Genomics @biorxiv-genomic.bsky.social
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Itai Yanai @itaiyanai.bsky.social Professor at the NYU School of Medicine (https://yanailab.org/). Co-founder and Director of the Night Science Institute (https://night-science.org/). Co-host of the 'Night Science Podcast' https://podcasts.apple.com/us/podcast/night-science/id1563415749
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Anna Cuomo @annasecuomo.bsky.social EMBO Postdoctoral fellow at the Garvan Institute of Medical Research, Sydney, Australia.
Previously EMBL-EBI, Wellcome Sanger Institute and University of Cambridge in Cambridge, UK.
All things single-cell, genetics & genomics.
Kieran Campbell @kieranrcampbell.bsky.social https://www.camlab.ca | ML for cancer genomics + single-cell and spatial computational methods | Toronto Canada 🖥️🧬
Davide CIttaro @daweonline.bsky.social Coordinator of λ-lab @ Center for Omics Sciences, Milan | Assistant professor of bioinformatics @unisr.bsky.social
Eric Kernfeld @ekernf01.bsky.social Statistician and computational biologist; uw alum; jhu student. He/him. http://ekernf01.github.io
Alicia Oshlack @aliciao.bsky.social Bioinformatics and Computational Biology. Australia
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Sean Simmons @seankenneths.bsky.social Computational biologist at the Broad Institute
Davis McCarthy @davisjmcc.bsky.social Head, Bioinformatics and Cellular Genomics Lab,
St Vincent's Institute of Medical Research, Melbourne. Stats, AI/ML, bioinformatics, genomics, single-cell.
https://www.svi.edu.au/researchers/dr-davis-mccarthy/
Lior Pachter @lpachter.bsky.social Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Eszter Lakatos @eszterlakatos.bsky.social Computational biologist fascinated by (cancer) genomes. Cyclist, climber and amateur singer on the side. Assistant Prof at Chalmers.
Adam MacLean @adamlmaclean.bsky.social Associate professor @USC. Modeling cell fate with dynamical systems & statistical inference. What makes a stem cell? macleanlab.usc.edu he/him
Dr. Jean Fan @jef.works Associate prof comp biologist @JHUBME. Founder @cuSTEMized. Editor @PLOSCompBiol. Alum @HarvardDBMI @blairmagnet. Doing art like a science, science like an art.
Michelle Franc Ragsac, PhD 🇵🇭🇺🇸 @mragsac.com 👩🏽💻 #FilipinoAmerican Scientist 🧪 • #InvisibleDisability 🌻 • She/Hers
Personal Account! ✨
Matthias Farlik @mfarlik.bsky.social PI of the INIMAC - Innate Immune Activation Lab - with a focus on innate immune cells and mechanisms leading to their activation. Immunology + NGS-Tech-Dev is where I come from. Functional screens rock! @meduniwien.ac.at. Opinions expressed are my own!
KaminskiMed @kaminskimed.bsky.social First Generation Physician-Scientist, & many other things. This account is Private - opinions and tweets do not represent any of the organizations I work with.
Carlos Talavera-López @cartalop.bsky.social Director of Computational Target Biology at GSK
Computational biologist | Clinician
PhD @ki.se & @scilifelab.se
Postdoc @crick.ac.uk @sangerinstitute.bsky.social @ebi.embl.org @teichlab.bsky.social
I code in a suit | Nicaragüense | Childless cat lad
🇳🇮🇸🇪🇬🇧🇩🇪
Andre Rendeiro @andre-rendeiro.com Principal Investigator at CeMM and LBI-NetMed: https://rendeiro.group
Computational Biology of Aging and Pathology
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Casey Greene @casey.greenelab.com Chair of the Department of Biomedical Informatics at the University of Colorado School of Medicine. Research: transcriptomics, machine learning, public data - pick two of three. He/him. Views mine, not employer's.
Stephen Turner @stephenturner.us FIeld guide. Quartermaster. Associate Professor and Research Dean at UVA School of Data Science. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Genome Research @genomeresearch.bsky.social A leading peer-reviewed genomics journal. https://genome.cshlp.org
Submit: http://submit.genome.org
Quaid Morris @quaidmorris.bsky.social Computational biology, machine learning, AI, RNA, cancer genomics. My views are my own. https://www.morrislab.ai
He/him/his
Lukas Weber @lmweber.bsky.social Assistant Professor of Biostatistics, Boston University. Statistical genomics, genomic data science, open science, R programming https://lmweber.org/
Mike Morgan @mdmorgan.bsky.social Lecturer (assistant professor) University of Aberdeen. Immunology, computational biology, genetics and single cells. Runner, climber and connoisseur of Yorkshire tea. Views expressed are my own. https://www.morganlab.co.uk/
Jan Lause @janlause.bsky.social data science postdoc in Tübingen 🧬🖥️🧠 scRNA data analysis, UMAP/tSNE & retina neuroscience | science journalism on AI & sustainability 🤖❤️🌍 | easily sidetracked by small plot details & cool birds 📈🔍🦜
Stefano Mangiola @stemang.bsky.social Computational cancer-immunology and tumour microenvironment
@SAiGENCI and @WEHI_research, VCA fellow @VicGovDH
Constantin Ahlmann-Eltze @const-ae.bsky.social Scientist at Isomorphic Labs. Previously at UCL and EMBL working with Wolfgang Huber. Biology, ML, Python, R, cancer immunology
oZgun Gokce @gokcegroup.bsky.social Neuroscience Professor at UKBonn&DZNE Bonn. Bridging the gap between brain and immunity with genomics 🏳️🌈🏴☠️🇨🇳🇹🇷🇫🇷🇳🇪🇩🇪
https://gokcelab.org ORCID 0000-0001-6319-404X
Dr Julia Marchingo @jmarchingo.bsky.social Immunologist - T cell, proteomics and immunometabolism enthusiast! Senior postdoc in Strasser lab at WEHI 🇦🇺. STEMinist. She/her. Views are mine.
Francesca Finotello 🖥️🧬 @francescafinotello.bsky.social Assistant Professor leading the Computational Biomedicine Group at the University of Innsbruck • Data scientist at the Digital Science Center (DiSC) • Precision medicine and cancer immunotherapy • Mother 🧬🖥️
https://computationalbiomedicinegroup.github.io/
Kelly Street @kstreet.bsky.social Assistant Professor in Biostatistics at USC. Interested in computational tools for single-cell genomics, esp. R/Bioconductor. Teaching a lot of cool stuff related to Health Data Science.
he/him
Luke Zappia @lazappi.bsky.social Bioinformatician, data scientist, software developer
Also @_lazappi_ and @lazappi@mastodon.au
Julien Roux @julienroux.bsky.social Bioinformatician, Department of Biomedicine @ Uni Basel & Swiss Institute of Bioinformatics
Interested in bulk and single-cell omics, data analysis, experimental design, data visualization, R/Bioc, open science, EDI, etc 🧬 🖥️
David Garfield @dagarfield.bsky.social That same guy from Twitter/X- J @julienbryois.bsky.social @julienbryois.bsky.social Senior scientist leveraging human genetics and single cell genomics for drug discovery
Samuel Marsh Ph.D. @samuelmarsh.bsky.social Postdoc Beth Stevens Lab | Interested in Alzheimer’s disease, all things single cell, and neuroimmune | Dad 👧👶🏻 | #scicomm #rstats | NEU ‘10 & UCI ’16
https://samuel-marsh.science- M Michael Stadler @mbstadler.bsky.social
Davide Risso @davi1893.bsky.social
Mikel Hernaez @mikelhernaez.bsky.social Head of the Machine Learning for Biomedicine (ML4BM) lab @ CIMA University of Navarra. (Graph) representation learning. Single cell in advance cancers.
@danapeer.bsky.social @danapeer.bsky.social
Jason Yang @jasonyanglab.org Assistant Professor at Rutgers New Jersey Medical School | Systems Biology, Synthetic Biology, Machine Learning, Antibiotic Resistance, Tuberculosis, Heart Failure, Immunoengineering
Gioele La Manno @gioelelamanno.bsky.social Professor at #EPFL - #RNAVelocity inventor - Laboratory of Brain Development and Biological Data Science. Single-cell and spatial biologist studying brain development and lipids. #ERCStg investigator
Clarence Mah @clarencemah.me CompBio Scientist, PhD • #spatialomics, #rnabiology, #opensource • Chinese-Malay American
🍱 Creator of github.com/ckmah/bento-tools
⭐️ clarencemah.me
Ashley Maynard @ashleymaynard.bsky.social Group Leader (ELISIR) at EPFL BMI - https://www.epfl.ch/labs/gr-maynard/
Previously ETH Zurich in Treutlein lab and CZ Biohub - working to understand complex biology a single cell at a time
Bart Deplancke @bartdeplancke.bsky.social Professor in Systems Biology & Genetics @EPFL, opinions my own; Single Cell Omics / Gene Regulation / Transcription Factor / Stem Cells / Regulatory Variation / ML / Imaging / Adipose Biology / Microfluidics
https://www.epfl.ch/labs/deplanckelab
Stein Aerts @steinaerts.bsky.social Computational biologist interested in deciphering the genomic regulatory code at vib.ai
Katja Rust @rustflylab.bsky.social #Drosophila research group with a heart for #scRNA seq on the search for why cells do what they do when they do it.
We’re doing #DevBio #CellBio #Cancer research led by one of the #WomenInSTEM and a #NewPI.
Etche_homo @etche.bsky.social Co-director of MoPED (Mechanisms of Paracrine & Endocrine Disorders) lab in Marseille 🇫🇷 on cell signaling & determination of self & beyond during neural crest differentiation. Personal account.
Mark Robinson @markrobinsonca.bsky.social statistical bioinformatics; canadian / swiss; #methodsmatter #rstats; open science advocate; grumpy towards prestige worshippers, excessive admin and bros; will sacrifice sleep for a sunrise.
https://robinsonlabuzh.github.io/
scverse @scverse.bsky.social Foundational tools for omics data (mostly in python).
Emma Dann @emmamarydann.bsky.social Postdoc fellow @ Stanford & Gladstone Institutes
Core team @scverse-team.bsky.social
Bringing the single-cell genomics in human complex trait genetics
https://emdann.github.io/
Lukas Heumos @lukasheumos.bsky.social Sr Solution Architect Genomics @NVIDIA | Co-founder @scverse | Postdoc at @theislab
Views and opinions expressed on this account are those of my own and do not represent those of my employer, NVIDIA.
Mikaela Koutrouli @mkoutrouli.bsky.social Computing all things single-cell | Postdoc at Genentech @MarioniLab | Steering council at scverse.org
Can Ergen @canergen.bsky.social single-cell genomics, spatial transcriptomics, T cell immunology, IBD
Adam Gayoso @adamgayoso.bsky.social Machine learning and biology. Research Scientist at Google DeepMind. adamgayoso.github.io. Views are my own.
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup
Luca Marconato @lucamarconato.bsky.social
Gregor Sturm @grst.bsky.social Single Cell/Spatial. Cancer Immunology. Outdoor activities.
Core developer @scverse.bsky.social.
Working in Clinical Bioinformatics at Boehringer Ingelheim.
Formerly PhD student at Medical University of Innsbruck.
My private account.
github.com/grst
Alistair Forrest @alforrest.bsky.social Head of the Systems Biology and Genomics Lab at the Harry Perkins Institute of Medical Research, University of Western Australia
#FANTOM5 #transcriptomics #spatial #cellcommunication #ovariancancer #bioinformatics #singlecell
Marie-Julie (MJ) Favé @mjfave.bsky.social Associate Prof at Concordia University
Computational Genomics Lab &
Environmental Human Health
PhD. Loves data. Montrealer
Lab website: https://mariejuliefave.weebly.com/
🚲
Luciano Martelotto @lgmartelotto.bsky.social Sc/St-Omics pro-aficionado. Knowledge sharing is my thing. Views, opinions and comments are my own and do not represent those of my employer. Like/Share ≠ endorse
Favorite quote: “Be curious, not judgmental”
Dominic Grün @dominicgrun.bsky.social Quantitative Single-Cell Biology
Prof at Würzburg Institute of Systems Immunology (WüSI)
Fabian Theis @fabiantheis.bsky.social Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Thomas Ashhurst @thomasash.bsky.social Senior Scientist @ The University of Sydney: cytometry, CyTOF, single-cell & spatial multiomics, systems immunology. Interests in respiratory 🫁 & neurological 🧠 infectious disease 🦠, paediatric immunology 👶.
https://tomashhurst.github.io
Sarah Ashley @sarah-ashley.bsky.social Computational biologist @MCRI | Naarm Melbourne
Center for Food Allergy Research | National Allergy Centre of Excellence | #WomenInSTEM 🧑🏻🔬
Postdoctoral fellow working on treatments for food allergies 🥜
#scRNAseq #systemsbiology
#VIIN Emerging Leaders ELC
Ajit Johnson Nirmal @ajitjohnson.com Assistant Professor @harvard • Tumor Microenvironment | Spatial Biology | Computational | Multimodal Data Integration • PI at @nirmallab.com
Zhisong He 何志嵩 @zhisonghe.bsky.social Senior scientist & lecturer in Barbara Treutlein's Lab at D-BSSE, ETH Zürich. Computational biologist working on single-cell and spatial genomics, brain development and brain organoids
Jovana Maksimovic @jovmaksimovic.bsky.social Senior Research Associate in Bioinformatics & Computational Biology in the Oshlack Lab @petermaccc.bsky.social Australia. Mum. Sci-fi nerd. Cat person. Really loves cheese. And dancing.
Martina Braun @martinabraun.bsky.social PhD Candidate @CRG.eu with @larsplus.bsky.social | Computational Biology & Single Cell Epigenetics
Laura de Rooij @lderooij.bsky.social Principal Investigator at CeMM | Vascular Aging, Endothelial Cell heterogeneity & Single Cell Omics https://derooijlab.org/
Muzz Haniffa @mhaniffa.bsky.social Clinician scientist, passionate about #immunology, #genomics, #single-cell and #spatial omics, #development #organoid #dermatology. Mother, food enthusiast and film buff
Jungsu Kim @jungsukim77.bsky.social Alzheimer, APOE, Actin, Txn factors, Immune, Tau, miRs, Drugs | Single cell & Spatial omics, Proteomics, QTL | ASO, siRNA, AAV | Mouse, iPSC, Drosophila, Zebrafish | Microglia, Astrocytes, Oligodendrocytes https://medicine.iu.edu/faculty/41977/kim-jungsu
Terkild Brink Buus @terkild.bsky.social Associate Professor intrigued by skin immunology, T cell lymphoma, S. aureus-T cell interactions and single-cell analyses at University of Copenhagen @ucph.bsky.social @sic-ucph.bsky.social- H Michael Tran @huytransformer1.bsky.social
Micha Sam Brickman Raredon @msbr89.bsky.social Scientist/Engineer. Assistant Professor @ Yale School of Medicine. Tissue Biology, Lung Regeneration, Data Science. Here to learn!
RaredonLab.com & GitHub.com/RaredonLab
Chris McGinnis @cmcginnis.bsky.social Cancer immunology, metastasis, TME, single-cell genomics | Postdoc Satpathy Lab Stanford | PhD Gartner Lab UCSF
Manolis Maragkakis @manolis-maragkakis.bsky.social Stadtman Principal Investigator @NIH / NIA. Computational Genomics, RNA, Aging, Stress Response, Senescence. Posts are my own. maragkakislab.com
Jason Hong, MD, PhD @jasonhongfc.bsky.social Pulmonary & critical care physician at UCLA | Researcher in pulmonary hypertension
The Sheyn Lab @sheynlab.bsky.social Orthopedic Stem Cell Research Lab of Dmitriy Sheyn, PhD develops disease models and stem cell therapies for #BackPain #Spine #Tendon #SportsMedicine #MSK
https://www.cedars-sinai.edu/health-sciences-university/research/labs/sheyn.html
Zachary Hemminger @zehemminger.bsky.social Co-Founder Biocartography
Scalable Single Cell Spatial Omics Solutions with ATLAS
Spatial transcriptomics method development during PhD & Postdoc @ UCLA
@niklasjlang.bsky.social @niklasjlang.bsky.social Clinician scientist @ University Hospital Basel | MD @helmholtzmunich.bsky.social | MSc Bioinformatics @edinburgh-uni.bsky.social | interested in PCCM, lung fibrosis, and single cell omics | mountaineering enthusiast | Views are my own