Jeff Rhoades @rhoadesscholar.bsky.social โTo leave the world a bit better, whether by a healthy child, a garden patch or a redeemed social condition, to know even one life has breathed easier because you have lived; this is to have succeeded.โ - Ralph Waldo Emerson
CellMap Project Team @cellmap.bsky.social HHMI Janelia Research Campus
Rachel Lee, PhD @scientistrachel.bsky.social BioImage Analysis Lead at AIC Janelia
Alison Tebo @agtebo.bsky.social Group Leader @ Janelia Research Campus, protein engineer, ๐ณ๏ธโ๐ she/they
https://alisontebo.com/
Anirban Ray @anirbanray.bsky.social PhD Student working on bioimaging inverse problems with @florianjug.bsky.social at @humantechnopole.bsky.social + @tudresden.bsky.social | Prev: computer vision Hitachi R&D, Tokyo.
๐: https://rayanirban.github.io/
Likes ๐ธ๐๏ธ๐๏ธ๐ and โ๏ธ
@beyeneabraham.bsky.social @beyeneabraham.bsky.social
Loren Looger lab @loogerl.bsky.social UCSD, HHMI
Neuroscience, protein design, climate change
Helen Farrants @helenfarrants.bsky.social
Andreas Mรผller @andimicroscopy.bsky.social Scientist at Paul Langerhans Institute Dresden and Visiting Scientist at HHMI Janelia Research Campus. Interested in the structural features of pancreatic islet cell function and signaling. ๐ฌ
Kyle Harrington @kisharrington.mastodon.social.ap.brid.gy Computer scientist. Scientific computing, image analysis, and artificial life. Views are my own and do not reflect my employers. Web: https://kyleharrington.com
๐ bridged from โ https://mastodon.social/@kisharrington, follow @ap.brid.gy to interact
Bill Katz @billkatz.com Programmer/scientist at HHMI Janelia Research Campus. Research interests include AI/ML, datastores, viz for imaging and sparse volumes. Consumer and very infrequent producer of fiction.
Catherine (Katie) Schretter @ceschretter.bsky.social Assistant Professor at Southern Methodist University | Postdoc in the Rubin lab at Janelia | Ph.D. Caltech | she/her | https://www.schretterlab.org
Robert Haase @haesleinhuepf.bsky.social Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML ๐ฌ๐ฅ๏ธ๐ views:mine
Uri Manor @manorlaboratory.bsky.social Ass. Prof & Director Goeddel Family Technology Sandbox; CZI Imaging Scientist; Hard-of-hearing; Followsโ endorse; โค๏ธ organelles/deep-learning/cochlea/neurons
Anne Carpenter @drannecarpenter.bsky.social Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
Eric Perlman ๐ณ๏ธโ๐ @perlman.bsky.social Trains, planes & bicycles. Vegetarian food.
Portland, OR based after two decades in Baltimore.
Find me on Mastodon: @perlman@urbanists.social
Yash Mehta @yashsmehta.bsky.social Cognitive Science PhD student, Johns Hopkins ๐ง
Previously: HHMI Janelia ๐บ๐ธ, AutoML Lab ๐ฉ๐ช, Gatsby Unit UCL ๐ฌ๐ง
www.yashsmehta.com ๐ฎ๐ณ
allen institute @alleninstitute.org accelerating science for a healthier world
Julia Kuhl @somedonkey.bsky.social scientific illustrator - https://somedonkey.work
(& unscientific artist - https://juliakuhl.myportfolio.com)
Diane Adjavon @adjavon.bsky.social Machine Learning Researcher ๐ฅ๐ฌ๐งซ ๐ฆ @ Funke Lab, #HHMIJanelia
Views my own.
Tom Kazimiers @tomkazimiers.bsky.social CATMAID, Science, Research Software, OpenSource, GIS, Forestry, timberNet, kazmos GmbH
Kyle Harrington @kyleharrington.com Images, AI, ML, and ALife.
Former: @hampshirecolg
@brandeisuniversity.bsky.social
@harvardmed.bsky.social
@uidaho.bsky.social
@hhmijanelia.bsky.social
@mdc-berlin.bsky.social
@ORNL.
Now @biohub.org.
Opinions are mine.
Jesse Aaron @jesseaic.bsky.social Manager, Advanced Imaging Center
HHMI Janelia Research Campus
Johan Winnubst @johanwinn.bsky.social
Joran Deschamps @jdeschamps.bsky.social I'm only posting when there's no more PR to review.
WEBKNOSSOS @webknossos.org Visualize, share, segment, and annotate your large 3D images online.
Raghav Chhetri @rchhmiscope.bsky.social Optics, Imaging, Microscopy, Neurotechnology
Team Lead, Miller Brain Observatory @Rockefeller
Carolina | Janelia | Rockefeller
Laura Breimann @laurabreimann.bsky.social Genome Organization & Imaging Researcher | Postdoctoral Fellow at Harvard Medical School | Expert in Advanced Imaging, Image Analysis & Chromatin Biology
https://laurabreimann.github.io/
Monika Scholz @monikakscholz.bsky.social PI at meep-neep (MPI for neurobiology of behavior) studying worm feeding and foraging behavior. I โค๏ธ imaging, watching worms wiggle and Friday experiments.
scholz-lab.com
Beth Cimini ๐ฌ๐ป๐ @bethcimini.bsky.social She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.
Brandon Scott @minesbioimaging.bsky.social Assistant Professor and CZI Imaging Scientist at South Dakota Mines | Nanoscience & Biomedical Engineering. Studying macrophages using pieces of sheet. Building #SnoutysaurusRex
Katherine Brown @katherine-brown.bsky.social Publishing Director at The Company of Biologists @biologists.bsky.social. Still with a big soft spot for #devbio. Opinions my own. she/her
https://biologists.com
Florian Jug @florianjug.bsky.social Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.
Michael Reiser @michaelreiser.bsky.social Trying to understand how behavior works by tinkering with flies, LEDs, lasers, and robots. Senior-ish group leader @ Janelia.
Jakob Voigts @jvoigts.bsky.social Group leader at @HHMIJanelia | www.voigtslab.org | @open-ephys.org
Josh Dudman @dudman.bsky.social husband, father, neuroscientist, senior group leader at Janelia sending missives to the world in a personal capacity; he|him
www.dudmanlab.org
https://orcid.org/0000-0002-4436-1057
Carsen Stringer @computingnature.bsky.social group leader @ HHMIJanelia, #neuroscience + AI ๐ฌ #cellpose | diversity and open-science for better science | she/her | https://mouseland.github.io
Ed Boyden @eboyden3.bsky.social Y. Eva Tan Professor in Neurotechnology, MIT. Mindspan Institute, co-founder, co-CEO. Neuroscientist, inventor, entrepreneur.
Fran Bottanelli @franbottanelli.bsky.social Solver of GTPases molecular puzzles | Membranes | CRISPR | STED super-res |Accidental immunologist | Academic mother of 2 cheeky monkeys | Assistant prof at FU Berlin. | Head of the Nanoscale Membrane Dynamics Lab
AIC at Janelia @aicjanelia.bsky.social Venture of HHMI to make pre-commercial microscopes available to a broad audience. Learn more at https://www.hhmi.org/aic
Jennifer Waters @jencwaters.bsky.social Microscopist builder
Ricardo Henriques @henriqueslab.bsky.social @AIOpticalBioLab.bsky.social. Group Leader #ITQB & H. Prof #UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own
- henriqueslab.org -
Teng-Leong Chew @scopeshifu.bsky.social Director, Advanced Imaging Center at HHMI Janelia Research Campus, USA.
Founder, Africa Microscopy Initiative.
HHMI @hhmi-science.bsky.social We invest in scientists at all career stages who make discoveries that advance human health for decades to come.
Marius Pachitariu @marius10p.bsky.social Lab head @HHMIJanelia
neuroscience, deep learning, large-scale recordings
#Kilosort, #Suite2p, #Cellpose, #Rastermap, #Facemap
Philip Hubbard @philiphubbard.bsky.social Computer science, biology.
https://www.janelia.org/people/philip-hubbard
https://fediscience.org/@philiphubbard
https://orcid.org/0000-0002-6746-5035
Nicolas Denans @nicolasdenans.bsky.social Scientist- Jack of all trades - Interest in #microscopy #immunology #devbio
Christophe ๐ฌ Leterrier @christlet.bsky.social NeuroCyto lab ๐คน๐ป Institute of NeuroPhysiopathology at CNRS & Aix-Marseille Universitรฉ ๐ง Neuronal cell biology ๐ฆ Super-resolution microscopy ๐ฌ Come for science ๐จ๐ปโ๐ฌ Stay for some cooking, sneakers and bike adventures ๐ฅ ๐๐ด
Sebastian Munck @sebastianmunck.bsky.social VIB BioImaging Core in Leuven, microscopes, image analysis, neurons, tomography, sometimes food, weird things, life, opinions are my own
Josh Moore @joshmoore.bsky.social Standardizing open bioimaging data infrastructure
Technical Director โ @gerbi-gmb.de
Member & Co-Founder โ โช@image.coopโฌ
TA1 Lead โ @nfdi4bioimage.bsky.social
#OSS Maintainer for @openmicroscopy.org and @zarr.dev
DrLachie @drlachie.bsky.social BioImage Analyst at @WEHI_research. Foodie, geek, Dad. Functions on coffee and red wine. Bringer of #MicroscopistsNightmares. He/Him
Constantin Pape @cppape.bsky.social Group leader @ Uni Gรถttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
Virginie Uhlmann @virginieuhlmann.bsky.social Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.
BioImaging North America @bioimagingna.bsky.social Engaging bioimaging scientists across North America by creating an inclusive and supportive community to share, advance and succeed together.
https://linktr.ee/bioimagingna
๐ธ: Montreal Skyline at sunset - V.Orr
๐ฒ๐๐๐๐๐ ๐๐๐๐๐๐ (@ctrue@mstdn.science) @ctrue.bsky.social Not as bad as I feared, but not as good as I hoped.
Rita Strack @ritastrack.bsky.social Chief Editor of Nature Biomedical Engineering. Ph.D. Previously at Nature Methods. @rita_strack on the place formerly known as twitter.
Davi Bock @dddavi.bsky.social Rural neuroscientist. Connectomics. Protists.
caveat emptor: https://bsky.app/profile/dddavi.bsky.social/post/3k5bnogiq5r2j
Etch a Cell @etchacell.bsky.social Citizen science from the EM STP at the Francis Crick Institute, created with the Zooniverse and global collaborators
Reto Fiolka @retof.bsky.social Optical imaging, interested in STEM topics.
First generation graduate from ETH Zรผrich
Associate Professor at UT
Southwestern Medical Center
Stephan Preibisch @preibischs.bsky.social Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia
Martin Weigert @maweigert.bsky.social Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ
David Solecki @so-lets-kilab70.bsky.social Posting our lab life studying the neuronal cytoskeleton and chromatin with cool microscopes๐ฌProud #GenX, #firstgen college, #intj @RITscience @stonybrooku Alum
Verified: https://orcid.org/0000-0001-8481-0403
Brad Hulse @bradkhulse.bsky.social Neuroscientist | Navigation | Central complex bumpologist | Senior scientist at Janelia
Katrin Vogt @katrinvogt.bsky.social GroupLeader@UniKonstanz, @CASCB, @MPIAnimalBehavior, Postdoc@Harvard, interested in neuroscience, neuromodulation, social modulation, insect behavior, and connectomics. #Maggotmaster #wearyourmodelorganism
Laura Grima @lauragrima.bsky.social Research Scientist in the Dudman lab @HHMIJanelia. PhD @Oxford, BSc @RoyalHolloway.
dopamine | foraging | decision-making | hippocampus | reinforcement learning
๐ง ๐งช๐ฉโ๐ฌ๐ญ๐ป
Wondering what mice are thinking about.
Martin Jones @martinjones.bsky.social Ex-physicist in a biology institute, working on image analysis and building new hardware at the Francis Crick Institute
ORCID: 0000-0003-0994-5652
Juan Nunez-Iglesias @jni.fosstodon.org.ap.brid.gy Core dev and co-founder napari.org
Core dev scikit-image.org
Co-author elegant-scipy.org
Research Fellow at https://www.monash.edu/researchinfrastructure/eresearch [โฆ]
[bridged from https://fosstodon.org/@jni on the fediverse by https://fed.brid.gy/ ]
Dr. Allyson Sgro @allysonsgro.bsky.social How do cells work together and make decisions when people have so much trouble? Group Leader @HHMIJanelia. My views are mine, not my employerโs. She/They ๐ณ๏ธโ๐
Wei-Chung Allen Lee @darbly.bsky.social circuit motifs of action selection, execution, & refinement | functional connectomics | assoc prof | lee.hms.harvard.edu
Christel Genoud @chgenoud.bsky.social Head of Electron microscopy facility at university of Lausanne and CEO of the Dubochet Center for Imaging Unil EPFL Unige UNIBE.. come for Electron microscopy. Stay for positive psychology and lemanic arc nature
Talley Lambert @talley.codes Microscopist & Python developer at Harvard Med. Creator @fpbase.org
Oded Rechavi @odedrechavi.bsky.social Epigenetic Inheritance, Neuroscience & anything biology-related
https://www.odedrechavilab.com/
q.e.d: https://www.qedscience.com
Organizer of โThe Woodstock of Biologyโ
TED: https://shorturl.at/myFTY
Huberman Lab Podcast: https://youtu.be/CDUetQMKM6g
Andy Moore @aaandmoore.bsky.social User of microscopes. Interested in organelles and how they move. Husband, dad, intermediate filament apologist, and postdoc in the JLS lab at HHMI Janelia Research Campus.
Jan Funke @janfunkey.bsky.social Group leader at the Human Technopole
Gaia Pigino @gaiapigino.bsky.social Working on self organization, cilia, and IFT. Cell biologist, CLEM and cryo-EM expert at Human Technopole. Was a serious fencer in a previous life. Love pottery!!! ๐บ
Brian English @sciencethecat.bsky.social senior scientist at Janelia | single particle tracking & #microscopy ๐ฌ | PhD on single-molecule enzymatic dynamics | my path: ๐ฉ๐ชโ๐บ๐ธโ๐ธ๐ชโ๐บ๐ธ | https://scholar.google.com/citations?user=UzGfR3MAAAAJ&hl=en
Integrative Imaging @ Janelia @i2janelia.bsky.social Platform for integrating Janeliaโs robust and wide-ranging efforts in developing microscopy instrumentation, probes, image analysis and visualization.
AI4Life @ai4life.bsky.social Artificial Intelligence For Image Data Analysis in The Life Sciences, funded by Horizon Europe, created to serve YOU!
Carsen Stringer (she/her) @computingnature.neuromatch.social.ap.brid.gy group leader @ HHMIJanelia, thinking about thinking, ๐ฌ#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | โ | [โฆ]
[bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]
@krokicki.bsky.social @krokicki.bsky.social
Luke Lavis @rhodamine110.bsky.social Chemist at HHMI's Janelia Research Campus. Passionate about designing, building, and giving away fluorescent dyes to illuminate biological systems. Striving to be positive about all things chemistry (except ChemDraw).
ORCID: 0000-0002-0789-6343
Adrian Wanner @adrianawanner.bsky.social SERI-funded #ERCStG Group Leader at PSI https://structuralneurobiology.ch, CV Starr Fellow at Princeton Neuroscience Institute, founder of https://ariadne.ai
Leslie B Vosshall PhD @leslievosshall.bsky.social Toward Excellent, Inclusive, & Open Science
Opinions are my own and do not reflect those of my employer.
Siรขn Culley @superresolusian.bsky.social Still seeking M. Ulder for joint author paper.
Microscopes โ
cats โ
combining the two โ
Lab --> https://www.kcl.ac.uk/research/culley-group
Michaล Januszewski @michalwj.bsky.social connectomics @ Google Research
Ignacio Arganda-Carreras @iarganda.eurosky.social Bioimage analysis and computer vision enthusiast. Whenever I can, I do software too.
Ikerbasque |ย University of the Basque Country (UPV/EHU) | DIPC | Biofisika Institute
ORCID: 0000-0003-0229-5722
Misha Ahrens @mishaahrens.bsky.social Neuroscientist @Janelia, HHMI
www.ahrenslab.org
Lorena Benedetti @lorenabenedetti.bsky.social Neuroscientist and cell biologist dedicated to unraveling how organelles adapt their structure and function to sustain neuronal signaling and metabolism. Postdoc in the JLS lab @ HHMI Janelia
Suliana Manley @sulianamanley.bsky.social Professor of physics and bioengineering @EPFL. Microscopy and mitochondria devotee. This view is all mine.
Janelia Research Campus @hhmijanelia.bsky.social HHMIโs Janelia Research Campus in Ashburn, Virginia, is innovating research practices and technologies to solve biologyโs deepest mysteries. https://www.janelia.org/
OME @openmicroscopy.org OME is a consortium of universities, research labs, industry and developers producing open-source software and format standards for microscopy data.
https://www.openmicroscopy.org/
Nikita Vladimirov @nvladimus.bsky.social Imaging scientist, light-sheet aficionado, #mesoSPIM developer, open source contributor. Building cool microscopes for cool people.
www.mesospim.org
www.github.com/nvladimus
Ulrike Boehm @ulrikeboehm.bsky.social R&D Scientist at ZEISS Group | PhD in Physics | Spearheading Development of Innovative Optics & Photonics Solutions
Website: http://ulrikeboehm.org
Rob Johnson @blobology.bsky.social Interested in mechanistic models of animal intelligence. Group Leader at HHMI Janelia Research Campus.
John Bogovic @bogovicj.bsky.social
Michele Avissar-Whiting @madubs.bsky.social Director, Open Science Strategy @ HHMI
My posts, my opinions
ilastik-team.bsky.social @ilastik-team.bsky.social Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
Kevin Dean @kevin-dean.bsky.social PI @ UT Southwestern. We build open-source microscopes + image analysis for rare cancer biology: navigate, Altair, autonomous microscopy, metastatic colonization.
https://www.dean-lab.org
https://thedeanlab.github.io
Stephan Saalfeld @herrsaalfeld.bsky.social scalable data analysis, modeling, AI, software design at HHMI Janelia
https://mastodon.social/@herrsaalfeld