Rust Language @rust-lang.org A programming language empowering everyone to build reliable and efficient software.
Website: https://rust-lang.org/
Blog: https://blog.rust-lang.org/
Mastodon: https://social.rust-lang.org/@rust
Flashes App ๐ฉ๏ธ @flashes.blue A photo viewing client for u from the creator of @skeetsapp.com & @bluescreen.blue
iOS: https://t1p.de/b3o4x
Android: Not available yet
โ FAQS: https://t1p.de/24kj0
๐ Bug Reports: https://t1p.de/phwii
๐ก Feature Requests: https://t1p.de/8tmnc
Kieran Didi @kdidi.bsky.social ๐งช Research Scientist @nvidia and PhD student @Oxford staring at proteins all-day
๐งโ๐ป Website/Blog: https://kdidi.netlify.app/
๐ค GitHub: https://github.com/kierandidi
๐ Prev. Cambridge/Heidelberg
Clay Kosonocky @kosonocky.bsky.social ML + Biochemistry PhD Candidate at UT Austin. BioML Society Founder. All problems are solvable, so let's solve some
biomlsociety.org
Sean Johnson @trichomedoctor.bsky.social Protein ML. Synbio. Enzyme discovery and engineering. Glandular trichomes. Proud Washington State alum.
Rosetta Commons @rosettacommons.bsky.social Rosetta Commons is the central hub for hundreds of developers and scientists from ~100 universities and laboratories to contribute and share the Rosetta source code.
Rosetta Commons members develop software improvements to solve their unique queries.
Neil Thomas @countablyfinite.bsky.social AI x Biology
EvolutionaryScale / Biohub
PhD UC Berkeley
Prev: Google X, 23andMe,
https://thomas-a-neil.github.io
Kate Stafford @kastacholamine.bsky.social AI/ML for proteins, small molecules, and everything in between. Scientist @AtomwiseInc. (she/her) ๐ Previously: UCSF, Columbia, DE Shaw Research, MIT.
Stephanie Wankowicz @stephanieaw.bsky.social Computational Structural Biologist
Scientific Program Director, Prism
Adjunct Professor, Vanderbilt University
(she/her)
prismscience.org
Past: Vanderbilt, UCSF, Dana-Farber, Broad Institute, UMass Amherst
Brian Hie @brianhie.bsky.social AI for biology | Stanford and Arc Institute
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University ๐ฐ๐ท | former Steinegger Lab @ SNU, Sรถding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
Mohammed AlQuraishi @moalquraishi.bsky.social MLing biomolecules en route to structural systems biology. Asst Prof of Systems Biology @Columbia. Prev. @Harvard SysBio; @Stanford Genetics, Stats.
Martin Pacesa @martinpacesa.bsky.social Assistant Professor at the University of Zurich.
๐ฅ๏ธ protein design, machine learning๐ค, crystallography๐, cryoEM๐ฌ. Anti-theist. Avid weirdness connoisseur ๐ฉ http://www.pacesalab.com/
John Doench @johndoench.bsky.social Functional genomics @ Broad Institute. Screen all the things!
David A Knowles @davidaknowles.bsky.social machine learning and functional/statistical genetics. Associate Prof @Columbia and Core Faculty @nygenome. he/him/his. https://daklab.github.io/
Diego del Alamo @delalamo.xyz Computational protein engineering & synthetic biochemistry at Takeda
Opinions my own
https://linktr.ee/ddelalamo
Michael Bronstein @mmbronstein.bsky.social DeepMind Professor of AI @Oxford
Scientific Director @Aithyra
Chief Scientist @ProximaBio
ML Lead @ProjectCETI
geometric deep learning, graph neural networks, generative models, molecular design, proteins, bio AI, ๐ ๐ถ
Nature Computational Science @natcomputsci.nature.com A @natureportfolio.nature.com journal on mathematical models and computational methods/tools that help advance science in multiple disciplines. https://www.nature.com/natcomputsci
Syma Khalid @sykhalid.bsky.social Prof of Computational Microbiology. Oxford Biochemistry & St Anneโs College. Bacterial Cell Envelopes. LFC fan ๐
Seyone Chithrananda @seyonec.bsky.social phd student @stanford | undergrad @berkeleyeecs
Nextflow @nextflow.io The leading open source orchestrator for containerized, data-intensive pipelines on any infrastructure at any scale. From @seqera.io
MultiQC @multiqc.info Open-source tool to simplify and streamline quality control analysis, from @seqera.io
Seqera @seqera.io The Intelligent Engine for Life Sciences. From the Creators of @nextflow.io and @multiqc.info
Harshil Patel @drhpatel.bsky.social Professional pipeline stitcher, nf-core dabbler here and there, Director of Scientific Development @Seqera
.
Paolo Di Tommaso @paoloditommaso.bsky.social
Rob Lalonde @rlalonde.bsky.social Chief of Commercial Partnerships @Seqera.io
Doing cool @nextflowio infrastructure stuff in #bioinformatics and helping startups with going to market. Tweets are my own.
Ken Brewer @kenibrewer.bsky.social Open-source x Science - Dev Advocate @ Seqera
Bioimaging enthusiast
Marcel Ribeiro-Dantas, Ph.D. @mribeirodantas.bsky.social ๐จโ๐ป @Nextflow.io and @nf-co.re Senior Developer Advocate at @Seqera.io ๐ช๐ธ
๐จโ๐ฌ Former Institut Curie & @Sorbonne-universite.fr ๐ซ๐ท
๐จโ๐ Former LAIS / HUOL & BioME - UFRN ๐ง๐ท.
Open Science Software Foundation @openscience.software A non-profit foundation dedicated to supporting open source scientific tools and promoting free access to resources for the global scientific community.
Chris Hakkaart @chrishakk.bsky.social ๐จโ๐ฌ Scientist | ๐จโ๐ป Bioinformatician | โ๏ธ Technical Writer for Seqera
Luke Pembleton @lwpembleton.bsky.social Genomic Breeding Scientist ๐จโ๐ป๐งฌ | Global Strategic Science Manager โ #F0D600 Seed Company | #NextflowAmbassador | Timezone variable ๐๐ | Dad | Views my own. ๐ฆ
๐๐ https://lpembleton.rbind.io
Dr. Stephanie @punkrockscience.bsky.social PhD brain and genomic scientist. Ocean junkie. Computer wrangler. Open data believer. Geek. Punk. Not that kind of doctor. Views only my own. She/her
Graham Coop @gcbias.bsky.social Population and evolutionary genetics @UCDavis. Posts, grammar, & spelling are my views only. He/him. #OA popgen book https://github.com/cooplab/popgen-notes/releases
Richard Sever @richardsever.bsky.social Chief Science and Strategy Officer, openRxiv. Co-Founder, bioRxiv and medRxiv.
Michael Eisen @mbeisen.bsky.social Nematode antagonist
J. Chris Pires @jchrispires.bsky.social Professor passionate about student success & team science #firstgen #Brassica enthusiast walking Dogs of the Plant World
#Agriculture #Food #HigherEd #EduSky #Agsky #SciComm & more
#Soil #Crop #Science ; opinions mine
Jeffrey Ross-Ibarra @jrossibarra.bsky.social evolutionary genomics of maize and wild relatives. erstwhile ethnobotanist. purveyor of bad puns. dad. prof and HPC director at UC Davis. not actually a cool cow from 1994. rilab.ucdavis.edu. views, especially bad ones, mine only (he/him)
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Jonathan Pritchard @jkpritch.bsky.social My lab at Stanford studies human population genetics and complex traits.
Cameron Thrash @jcamthrash.bsky.social Professor, USC Marine and Environmental Biology, microbe hunter. Dad, husband. he/him. Not a bot. thethrashlab.com @the.thrash.lab
Tuuli Lappalainen @tuuliel.bsky.social Professor at KTH, NY Genome Center, SciLifeLab, working on functional genomics and human genetics.
Claus Wilke @clauswilke.com Computational biologist, data scientist, occasional blogger | https://blog.genesmindsmachines.com/ | https://clauswilke.com/ | Opinions are my own and do not represent UT Austin.
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Daniel MacArthur @dgmacarthur.bsky.social Genomics, big data, open science, diversity. Director of the Centre for Population Genomics, focused on building a more equitable future for genomic medicine. Opinions my own.
Willem van Schaik @wvschaik.bsky.social Microbiology, microbiome, antimicrobial resistance. Sometimes UK politics. Head of Research of the School of Infection, Inflammation and Immunology, University of Birmingham. Also Co-Director of @target-amr.bsky.social.
Alex Rubinsteyn @alexr.bsky.social personalized cancer immunotherapy = genomics + immunology + machine learning + oncology
(pirl.unc.edu)
Damien C-C @dccc-phd.bsky.social Human geneticist ๐งฌ, bioinformagician ๐ง๐ปโโ๏ธ, choral musician ๐ผ, and unrepentant city slicker ๐๏ธ. Amplifying interesting signals (like #ScienceWin)! [he/him]
https://orcid.org/0000-0003-3466-1846
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Doc Edge @docedge.bsky.social Associate professor in quantitative and computational biology @USC. Genetics, evolution, statistics. https://edgepopgen.github.io/edgelab/
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Jeffrey Barrett @jeffbarrett.eu Professor of Computational Predictive Medicine, University of Helsinki. Posts about genomics, returning to academia after 10 years in industry, and the great outdoors.
Lior Pachter @lpachter.bsky.social Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Jason Moore @moorejh.bsky.social Chair, Department of Computational Biomedicine at Cedars-Sinai Medical Center in Los Angeles. Director, Center for Artificial AI Research & Education. Agentic AI. Atari enthusiast. Retrocomputing. Maker.
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Quaid Morris @quaidmorris.bsky.social Computational biology, machine learning, AI, RNA, cancer genomics. My views are my own. https://www.morrislab.ai
He/him/his
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Harold Pimentel @hjp.bsky.social Assistant prof at UCLA using the Bayes for the genomes https://pimentellab.com
Joshua Shapiro @josh.shapiro.foo not โEurekaโ but โThatโs funnyโฆโ
Current projects: Biological data and Childhood cancer at http://ccdatalab.org, part of https://alexslemonade.org
Not governor.
Mike Inouye @mikeinouye.bsky.social Computational biologist. Geriatric Millennial. Professor, University of Cambridge. British | Australian | American.
www.inouyelab.org | Cambridge, UK
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Titus Brown @titus.idyll.org I am not a deep man, but I have many shallows. ctbrown@ucdavis.edu, http://ivory.idyll.org/blog/.
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I โฅ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Nicolas Robine ๐ช๐บ๐ซ๐ท๐บ๐ธ @nicorobine.bsky.social Artisanal Genomics since 2002. Mostly in English, sometimes in French. #NoPasaran
bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social
๐ฒ๐ฝ Leonardo Collado-Torres @lcolladotor.bsky.social #RStats @Bioconductor.bsky.social/๐ง genomics @lieberinstitute.bsky.social + Asst. Prof. @jhubiostat.bsky.social/@lcgunam @jtleek.bsky.social @aejaffe.bsky.social alumni/ @libdrstats.bsky.social @CDSBMexico.bsky.social
http://lcolladotor.github.io
Matt Loose @minomatt.bsky.social Sequencing, adapting and exploring genomes.
https://linktr.ee/matt.loose
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. ๐ฒโ๏ธ๐พ๐ฎ ๐ธ ๐งช ๐งฌ ๐ฅ ๐ฆ ๐๐๏ธ he/him.
https://bioinformer.substack.com
Ivan Liachko @ivanliachko.bsky.social Scientist, father, founder/CEO of PhaseGenomics; opinions are my own and probably not the position of the company.
Ian Dworkin @idworkin.bsky.social Evolutionary biologist in love with morphology, especially size & shape. Drosophila Quantitative/Statistical geneticist. Dabbler in Development. Occasional genomicist.
Thinking about variation in cell size a lot lately.
https://dworkinlab.github.io
Michael Guertin @guertin.bsky.social Professor of Molecular Biology and Genomics at UConn Health. The lab studies gene regulation, focusing on transcription factors
Chris Fields @cjfields.bsky.social Microbiologist turned computational biologist
Bioinformatics Core Director, HPCBio
Open Bioinformatics Foundation Board Member
#metagenomics #microbiome #pangenomics
#python #r (yeah yeah, and #bioperl)
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health ๐งฌ๐ฆ ๐
Associate Professor of Computer Science, Rice University ๐ฆ๐ป
Treangen Lab website: www.treangenlab.com
Josh Quick @scalene.bsky.social UKRI Future Leaders Fellow, University of Birmingham
Jason โObstacle to Progressโ Williams @jasonwilliamsny.bsky.social Assist Dir. @DNALC @CSHL
John Novembre @jnovembre.bsky.social Population geneticist, University of Chicago
Lee Katz @lskatz.github.io Co host of the Micro Binfie podcast
Alicia Oshlack @aliciao.bsky.social Bioinformatics and Computational Biology. Australia
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Phil Ewels @ewels.bsky.social ๐งฌ Scientist (bioinformatics / genomics), ๐ง๐ปโ๐ป software developer, ๐ชด community builder.
Product Manager for open source @seqera.io
Harriet Dashnow @hdashnow.bsky.social Asst. Prof, CU Biomedical Informatics.
#RareDisease #Genomics #STRs #bioinformatics #WomenInSTEM. Parent. Aussie. she/her
Views my own.
https://dashnowlab.org/
Img by familydestinationsguide (CC-BY)
Andrew Carroll @acarroll.bsky.social Product lead Genomics Google Research
Chris Saunders @ctsa.bsky.social Rare disease and cancer analysis models for sequencing data. Art school survivor. Views my own.
Nils Homer @nilshomer.com I write software for Biologists. Founder @fulcrumgenomics, Bioinformatician, Computer Scientist, Coder, Father of 2xGirls. Opinions are my own.
John Didion @jdidion.bsky.social Absolute binf. ๐งฌ/๐ฆ.
froggleston @froggleston.carpentries.org Director of Technology @thecarpentries, @froggleston@mstdn.science, open source advocate, heavy metal lover, he/him/they, @docfrogs coffee, @antididact guitarist, noob
Larry Hunter @proflhunter.bsky.social Knowledge based biomedical data science, artificial intelligence for discovery in molecular biomedicine, computational bioethics, theory of mattering. University of Chicago / Big Island HI
Ryan Morin ๐จ๐ฆ @morinryan.bsky.social Bioinformatician, genome biologist, data scientist, lymphomaniac, cynic, creator of Scholar Goggler (http://scholargoggler.com)
Jeff Saucerman @jsauce7.bsky.social Professor of Biomedical Engineering and Cardiovascular Medicine at UVA. Systems biology to discover drugs for heart disease. Hiking with my dog in Shenandoah NP, around Charlottesville. https://engineering.virginia.edu/faculty/jeffrey-saucerman
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Chris Miller @chrismiller.science I study cancer at Washington University in St Louis. Cancer Genomics, Bioinformatics, Data Viz, Tumor Evolution, AML, Immunotherapy, Irreverent humor ๐งฌ ๐ฅ๏ธ mostly @chrisamiller on other platforms
Oliver Hofmann @fiamh.bsky.social Cancer genomics in Melbourne, Australia, at day. Board games - https://instagram.com/fiamh_bgg - and dog training - https://instagram.com/totoro.the.lappie - at other times. He/him.
Daniel Standage @byuhobbes.bsky.social
Pรกll Melsted @pmelsted.bsky.social Professor @hi.is in CS, head of rna seq data analysis at decode genetics (views are mine). Bioinformatician, epistemic trespasser, &c.
ps. I hate GTF files
Arun Seetharam @arnstrm.bsky.social Lead Bioinformatics Scientist @ RCAC, Purdue University| Genomics, Data Science, and Computational Biology | Empowering research with innovative solutions | Letโs connect for collaborations in life sciences and beyond!
nf-core @nf-co.re A community effort to collect a curated set of analysis pipelines built using Nextflow.
BF Francis Ouellette @bffo.bsky.social Bioinformatics ๐งฌ๐ฅ๏ธ๐งช
#DATABASE OUP Editor-in-Chief;
#PLOS Comp Biol Education Sect. Editor;
#OpenScience #OpenAccess #OpenData;
friend of @jxtxfoundation.bsky.social,
@abinstitute.bsky.social, @mon-bug.bsky.social
- I am ๐จ๐ฆ