@mahmudsami.bsky.social @mahmudsami.bsky.social
Can Firtina @firtinac.bsky.social Assistant Professor of Computer Science at UMD | PhD from ETH Zurich
John Lees @johnlees.bacpop.org Pathogen informatics and modelling http://bacpop.org
(Research group leader at EMBL-EBI - http://ebi.ac.uk/research/lees/)
Andrea Guarracino @andreaguarracino.bsky.social https://guarracinolab.github.io/
Assistant Professor at the Translational Genomics Research Institute (TGen).
Computer engineer working on pangenomics.
Vikram Shivakumar @vikramshivakumar.bsky.social PhD Student @ JHU Langmead Lab
Rayan Chikhi @rayanchikhi.bsky.social
@dgautheret.bsky.social @dgautheret.bsky.social Trying to make sense of #RNA information.
Pierre Peterlongo @pierrepeterlongo.bsky.social Inria Senior researcher.
Head of the https://team.inria.fr/genscale/ at Inria and Irisa.
Algorithmics for sequencing data analyses, genomics and metagenomics.
Roland Faure @rfaure.bsky.social Sequence bioinfomatician, algorithms, methods.
Postdoc in Institut Pasteur in Rayan Chikhi's lab
Claire Lemaitre @clairelemaitre.bsky.social Researcher in computational biology at Inria, Rennes, France.
Part of the @genscaleteam.bsky.social team.
https://people.rennes.inria.fr/Claire.Lemaitre/index.php
@recombseq.bsky.social @recombseq.bsky.social
Kampersanda @kampersanda.bsky.social 徳島生まれ、ダブル配列育ち
Alessio Campanelli @ale-campa.bsky.social PhD student @ Ca' Foscari University of Venice
Rick Beeloo @rickbitloo.bsky.social PhD candidate Utrecht University
Some bio and coding stuff
Jens Zentgraf @rorak.bsky.social
Nathaniel K. Brown @nathanielbrown.bsky.social PhD Student | Langmead Lab @ JHU |
Bioinformatics Algorithms and Data Structures |
https://github.com/drnatebrown
Jouni Sirén @jltsiren.bsky.social Researcher at UCSC Genomics Institute. Space-efficient data structures and pangenome graphs.
Antoine Limasset @npmalfoy.bsky.social CNRS researcher in bioinformatics
Lille, France (Bonsai team).
I develop efficient computational methods to analyze massive sequencing data, creating scalable tools for genomics, transcriptomics, and metagenomics.
https://malfoy.github.io/- L Heng Li @lh3lh3.bsky.social Associate Professor
DFCI & HMS
Karel Břinda @brinda.eu ‖ Permanent Researcher / INRIA Start. Faculty @ INRIA Rennes 🇫🇷 ‖
BioInfo/CompBio: algorithms, genomics, pathogens & rapid diagnostic of antibiotic resistance《 https://brinda.eu | https://github.com/karel-brinda 》
Téo Lemane @tlemane.bsky.social
Yann Ponty @yannponty.bsky.social Bioinformatics researcher (CS PhD) • #RNA enthusiast • AI-skeptic but rational • Employed by #CNRS/#Polytechnique but views mine
Mohsen Zakeri @mohsenzakeri.bsky.social Postdoctoral Fellow at Johns Hopkins University, Computational Biology ❤️
www.mohsenzakeri.com
Barış Ekim @ekimb.bsky.social 🇹🇷. Postdoc @Yale, formerly @MIT @Broad. Skeets(?) in TR/EN, views my own.- D Daniel Baker @dnbaker.bsky.social Computational genomics, with focus on indexing + search, data re-use, and scalable algorithms.
C++/Rust enthusiast, hardware/algorithms.
Johns Hopkins PhD, prior ARUP Laboratories and PacBio.
Currently building GPU-accelerated platform at Roche.
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Michael Baym @baym.lol Associate Prof @HarvardMed. Microbial evolution, antibiotic resistance, mobile genetic elements, algorithms, phages, molecular biotech, etc. Find me under “floating dumpster fire”
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Yaron Orenstein @yaronorenstein.bsky.social Associate Professor in Computer Science and Life Sciences at Bar-Ilan University
Gaëtan Benoit @gaetanbenoit.bsky.social Postdoc researcher in bioinformatics at Pasteur institute. Scalable methods and software for metagenomics. https://github.com/GaetanBenoitDev
Ragnar {Groot Koerkamp} @curiouscoding.nl Postdoc on high troughput bioinformatics @ KIT Karlsruhe;
IMO, ICPC, Xoogler, Rust, road-cycling, hiking, wild camping, photography
Alfredo Perez @alfredo787perez.bsky.social
@luizirber.bsky.social @luizirber.bsky.social
Tommi Mäklin @themaklin.bsky.social I do statistics, bacterial (meta)genomics and bioinformatics software development.- D Daniel Liu @daniel-c0deb0t.bsky.social work: anthropic, previously: rust/bioinformatics
bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social - T Timothe Rouze @tmthrz.bsky.social PhD student in computational biology in Lille.
Igor Martayan @imartayan.bsky.social PhD student in algorithmic bioinformatics at @bonsaiseqbioinfo.bsky.social.
Interested in space-efficient data structures, sketching algorithms & high-performance computing
https://igor.martayan.org
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Jarno N. Alanko @jnalanko.bsky.social Postdoc in computer science and bioinformatics from Finland. Website: https://jnalanko.net. Various writings in English and Finnish: https://blog.jnalanko.net. Also on Mastodon: https://genomic.social/@jnalanko
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:48 | 10k 37:40 | HM 1:27:43 | M 3:39:06
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.- P Paul Medvedev @pashadag.bsky.social Algorithmic Bioinformatics Researcher and Teacher. Posts about research results and educational/mentorship topics (for details, see http://bit.ly/380vX22).