Lucien Hinderling @lhinderling.bsky.social tries to make microscopes smarter · bioimage analysis, optogenetics, ml, 3d printing, open science · postdoc in cellular signalling dynamics @PertzLab · https://hinderling.github.io
Kyle Barron @kylebarron.dev Creating the next generation of geospatial data tools for Python & the browser with GeoArrow, GeoParquet & GeoRust @developmentseed | he/him 🌈
betancur . n @nelbeu.bsky.social art & architectural historian / visual, material & religious culture
Chris Schmidt @schmchris.bsky.social Scientific Project Manager at the German Cancer Research Center (DKFZ) in Heidelberg, project coordination for NFDI4BIOIMAGE and I3D:bio, biologist by training (immunology, biochemistry, cell biology)
Ahmed Elewa @inperience.bsky.social In the beginning was the worm, and the worm was elegant. 📖
How does experience become inheritance? Opinions are based on my experience but some are inherited.
https://ahmedelewa.com
CCP-volumeEM @ccp-volumeem.bsky.social A community for computational practitioners working in volume electron microscopy (vEM)
Website: https://www.ccp-volumeem.ac.uk/
Join our mailing list at https://bit.ly/ccp-volume-em
Furkan Onder @furkanonder.bsky.social Python Triage Member | Focusing on CPython #LKD #Python #ArchLinux #Django #eBPF
https://github.com/furkanonder/
Hao Zhai @zhaihao.bsky.social PostDoc at @mhlab.bsky.social, @mpibrain.bsky.social
Karel Mocaer @karel-mocaer.bsky.social Postdoc @Jékely lab, Heidelberg University
From light to electron microscopy of marine organisms
Yates Buckley @yates9.bsky.social Founder of UNIT9 | Bridging Creativity & Tech | Substack: https://yatesbuckley.substack.com/ | Fiction, Neuroscience, AI, Future, Game Design
Stefania Marcotti @lankylaste.bsky.social Data and image analysis for all things bio | Computational tinkerer | Researcher | Bioimage analyst
John Ball @john-m-ball.bsky.social Computational vision neuroscientist and VGM enthusiast. Completely normal human person. Opinions expressed here are my own.
Ruaridh | Arsenal Premier League Champions 25/26 @ruaridhg.bsky.social Half Scottish 🏴 half English 🏴
Arsenal ST holder Clock End
From Aberdeen to London via Glasgow
@kdoran.com @kdoran.com PhD student at University of Sussex.
If you are using NNs for predicting spikes, or more generally, events, then check out our proposal for a new learning objective kdoran.com/spikedistance
Alba Guembe @albaguembe.bsky.social SYSstems BIOlogy of infection LAB
@UABarcelona 🔬🧫💻
infection phenomics & multiomic networks
Anna Klemm @ahklemm.bsky.social BioImage Analyst
Head of BioImage Informatics, SciLifeLab
NBIS, Sweden
https://www.scilifelab.se/units/bioimage-informatics/
Virginie Uhlmann @virginieuhlmann.bsky.social Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.
Jean-Yves Tinevez @jytinevez.bsky.social Research engineer and core facility manager at the Institut Pasteur
https://research.pasteur.fr/en/team/image-analysis-hub/
Everything #TrackMate #Mastodon-sc (the tool to track lineages in microscopy videos, not the social networks etc).
Views are my own
Ben Wetherall @wetherall.bsky.social Fertility & Cell-Cycle scientist 🥚🔬
Research Associate with @SuzanneMadgwick.bsky.social
NCL UK
Gaëlle Letort @gaellel.bsky.social Bioimage analysis and mathematical modelling, mainly in developmental biology. Research engineer @CNRS.bsky.social @pasteur.fr
Ignacio Arganda-Carreras @iarganda.eurosky.social Bioimage analysis and computer vision enthusiast. Whenever I can, I do software too.
Ikerbasque | University of the Basque Country (UPV/EHU) | DIPC | Biofisika Institute
ORCID: 0000-0003-0229-5722
Brandy A Freitas @brandy-syglass.bsky.social Director of Data Science & Analytics @syGlass.io, making data beautiful. 🦠🔬📊 Enthusiast of all things microscopy, hiking, and cooking. Board member @NESM.
Harvard | Rochester Institute of Technology | Science Club for Girls
@han-ol.bsky.social @han-ol.bsky.social Simulation, Bayes, trying to improve tools for science
@lassmichchemie.bsky.social @lassmichchemie.bsky.social
Marvin Albert @m-albert.bsky.social Image Analysis and Data Management at the Department of Biosystems Science and Engineering of ETH Zürich in Basel
Mark Kittisopikul @markkitti.bsky.social
Ariel Zeleznikow-Johnston @arielzj.bsky.social Neuroscientist, author | Book out now on brain preservation as a means of life extension: https://www.arielzj.com/the-future-loves-you |
Currently a postdoctoral fellow in @conscious_tlab
Tobias Ackels @tobiasackels.bsky.social Asst. Prof. at the University of Bonn, Germany. Interested in sensory neurophysiology and behaviour with a focus on olfaction
Rita Strack @ritastrack.bsky.social Chief Editor of Nature Biomedical Engineering. Ph.D. Previously at Nature Methods. @rita_strack on the place formerly known as twitter.
Nuno Pimpão Martins @nunopmartins.bsky.social
Jakob Reichmann @jkbrmn.bsky.social PostDoc at the Francis Crick Institute.
X-ray Imaging x Connectomics.
Andreas Schaefer @andreas-t-schaefer.bsky.social Neuroscientist @crick.ac.uk asking how information is processed in the brain.
Odours. Circuits. Neurotechnology. Synchrotrons. BCIs.
Co-founder Paradromics
Twitter: @AndreasTSchafer
Arnd Roth @arndroth.bsky.social Computational neuroscience and connectomics
Kutand Alkım Bayer @kutandalkim.bsky.social IZTECH-Chemistry, I like to be Polymath(learning different subjects), Polygot(interested in the learning different languages) comments and opinions are my own RT≠ is not endorsement (he/him)
Michael Winding @michael-winding.bsky.social Group Leader, the Francis Crick Institute.
Social Behaviour and Connectomics
https://www.crick.ac.uk/research/labs/michael-winding
Marcel Issler @macl-i.bsky.social Biophysicist tying to make sense of life.
Interdisciplinary @FWOVlaanderen PhD Fellow with @ColindaScheele at @vib_ccb.
Anna Simon @annasimon.bsky.social
Damian Dalle Nogare @damiandn.bsky.social Leading the bioimage analysis facility at Human Technopole Milan. Formerly cell and developmental biologist at the NIH. Serial immigrant 🇦🇺➡️🇳🇿➡️🇺🇸➡️🇮🇹🇪🇺. Fan of dogs, open source tools, and gin.
Ayesha Amjad @ayeshaamjad.bsky.social
Michael Morehead @michael-syglass.bsky.social CEO & cofounder of @syGlassVR, a virtual reality science company.
computer scientist, startups, VR, and lover of microscopy.
Carles Bosch @carlesbosch.bsky.social Scientist studying biological tissues with neuronal circuits inside. Tweets my own.
Aquí, tuitejo el què em passa pel cap molt de tant en tant.
trickymons@X
Yuxin Zhang @yuxinzhang.bsky.social PhD at the Francis Crick Institute. Mouse olfaction; systems neuroscience; connectomics; correlative 2P, X-ray and EM.
Sarosh Kayani @saroshk.bsky.social Research Assistant in the Kuan Lab mapping mouse cortical white matter using x-ray tomography 🧠 🔬
@kuanawanda.bsky.social @yaleneuro.bsky.social
Aaron Kuan @kuanawanda.bsky.social Assistant prof @yaleneuro.bsky.social: multiscale connectomics with EM and Xray; decision-making; brain-wide cortical networks.
Jemima Burden @jemimaburden.bsky.social Electron microscopist @lmcb-ucl.bsky.social @ucllifesciences.bsky.social
who loves answering biological questions using EM #electronmicroscopy #CLEM #correlativemicroscopy #volumeEM 🔬🔬😄#workingmum she/her
Davis Bennett @davisvbennett.bsky.social Open source software developer. I spend a lot of time working on Zarr. Formerly worked on bioimaging data stuff @hhmijanelia.bsky.social
Hannes Spitz @brokkoli71.bsky.social
Alison Beckett @aliemliv.bsky.social Electron Microscopist @ University of Liverpool
Sebi @sebi06.bsky.social I am a Software Architect for AI Solutions, Python Fan, Microscopist Image Analyst and really like Skiing.
Science is like magic but real.
Julia Fernandez-Rodriguez @juliafrodri.bsky.social Head of the Centre for Cellular Imaging, Gothenburg, Sweden. President of the Core Technologies for Life Sciences, CTLS, Association
Ryan Morey @rtm.zone Software Developer at the Princeton Neuroscience Institute working on connectomics
www.rtm.zone
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup
Paolo Ronchi @paoloronchi.bsky.social Electron microscopist, cell biologist, cyclist
Clément Caporal @caporalclement.bsky.social PhD Student @LabOptBio. In love with education, sciences, and poetry. (Bioimage analysis) He/him
Joe Hamman @jhamman.bsky.social Climate scientist, engineer and human. Co-founder/CTO @earthmoverHQ. @xarray_dev / @pangeo_data dev. Formerly
@carbonplanorg, @NCAR_Science, and @uw_cee. He/him.
Stephan Preibisch @preibischs.bsky.social Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia
Marie Held @makaefer.bsky.social Image analyst at the Centre for Cell Imaging, the University of Liverpool.
didyouknowimageanalysis.wordpress.com
CCI.liv.ac.uk
Sebastian Munck @sebastianmunck.bsky.social VIB BioImaging Core in Leuven, microscopes, image analysis, neurons, tomography, sometimes food, weird things, life, opinions are my own
Fabio Niephaus @fniephaus.com Research Manager on the @graalvm.org team at Oracle. Graal Languages, Native Image, developer tools, GraalVM developer experience. Previously at @hpi.bsky.social, @googlecolab.bsky.social, and @matonguitars.bsky.social. Views are my own.
jordan jordan jordan @jordan.matelsky.com making computers better using brains and making brains better using computers. computational neuro and dumb little web apps
sticking a steam wand directly into my brain and frothing it like a cappuccino at @kordinglab. senior research scientist at JHU/APL
Henning Falk Illustrations @falk-illustrations.de Biologist & microscopist who exchanged the pipette for a pen 🖊️ #sciart #cartoons
website: https://falk-illustrations.de/
Some of my work is available under a CC BY 4.0 license:
https://github.com/zarr-developers/zarr-illustrations-falk-2024
Casey Schneider-Mizell @csdashm.com Assistant Investigator at Allen Institute for Brain Science. Formerly Janelia, Universität Zürich, and U Mich Physics.
Building bottom-up insight into the brain from synaptic resolution connectomics and making computational tools to help you do that too.
Al Merose @al.merose.com Differential database administrator. Machine learning for climate & weather. Ex-Google Research, Founding Member of Technical Staff @OpenAthena.ai. Tinkering with xql.systems. He/him.
Ian Schuler @ianschuler.bsky.social CEO @developmentseed.org
Still a big fan of Freedom, but not in a shitty way
Sanket Verma @sanketverma1704.bsky.social Working on open-source software and communities.
https://sanketverma.com/
Ruth Hornbachner @rhornb.bsky.social PhD @ Pelkmans lab, University of Zurich
Bioimage Analysis | Developmental Biology
Mark @mkeller7.bsky.social Researcher in bioinformatics working on single-cell data visualization
https://markk.co
Cas @caswognum.nl Trying to teach machines (and myself) drug discovery at Valence Labs and Polaris.
www.caswognum.nl
🇳🇱🇨🇦
Christian Puller @christianpuller.bsky.social Neuroscientist at Max Planck Institute for Neurobiology of Behavior. Interested in vision, retina research, and gravel/road cycling.
Ken Ho @drkenho.bsky.social
John Bogovic @bogovicj.bsky.social
Stijn @stijnvanhoey.be Product development team lead at fluves.com - currently working on leak detection using fiber optics and subsea cable monitoring. Freelance developer/teacher. Living in Ghent.
Python | xarray | django | svelte
Sallie-May @hcl.bsky.social https://github.com/Sallie-May
I respond to all pms !
main account https://bsky.app/profile/bee-lzebub.bsky.social
Yuning Wang @yuningwang.bsky.social IMPRS PhD candidate @becklab.bsky.social @mpibp.bsky.social
alum @manorlaboratory.bsky.social
BS/MS @ucsandiego.bsky.social
Wan-Qing Yu @wanqingyu.bsky.social Scientist @AllenInstitute,
Past: Postdoc in Rachel Wong lab
amateur pianist, stargazer, #FirstGen (she/her)
Zarr @zarr.dev Chunked, Compressed, & Cloud-native N-dimensional arrays
See https://zarr.dev/ for more information.
Adam Taylor @adamjtaylor.bsky.social Director of Cancer Biology at Sage Bionetworks. Building radically collaborative cancer research communities through team science and the integration of clinical, multiomic, single-cell, & spatial data with the HTAN DCC, MC2 Center, & AACR Project GENIE.- K Krishna Choudhary @krishnachoudhary.bsky.social Biomedical Engineer and Data Scientist | Every dataset has a story to tell | https://kris-choudhary.github.io/
Tom Kazimiers @tomkazimiers.bsky.social CATMAID, Science, Research Software, OpenSource, GIS, Forestry, timberNet, kazmos GmbH
Jack Kelly @jack-kelly.com Building open source ML to reduce CO₂ emissions from the electricity grid
• Python, climate, forecasting weather & energy, AI, open data & science, Rust
• Now: Co-founder @openclimatefix.org
• Prev: DeepMind, NESO, Imperial
• https://github.com/jackkelly
Natalie Holroyd @natalieah.bsky.social I'm a medical imaging and deep learning scientist at UCL. I love running, hiking and gaming
🔬🏃🏻♀️🥾🎮
Teun Huijben @teunhuijben.bsky.social Scientist/PostDoc with Loïc Royer at Biohub, San Francisco 🔬 image analysis | localization microscopy | machine learning, 🇳🇱 by bike 🚲
📍San Francisco
Erick Ratamero @erickratamero.com Cross-posting from idlethumbs.social/@ratamero
half respectable professional (can you believe they let me manage data at EMBL?), half nerdy gremlin. views my own etc etc. he/him/ele
https://erickratamero.com
@will-j-moore.bsky.social @will-j-moore.bsky.social
Constantin Pape @cppape.bsky.social Group leader @ Uni Göttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
Wei-Chen CHU @weichen01.bsky.social R&D Scientist@ICOB Imaging Core, Academia Sinica, Taiwan
https://eabias.org/
https://weichenchu.com/
https://www.linkedin.com/in/weichen-chu/
https://orcid.org/0000-0002-3447-9043
Daniel Krentzel @danielkrentzel.bsky.social Hunting for new antibiotics with deep learning at @pasteur.fr 🧫 | Previously @crick.ac.uk and 🎓 @imperialcollegeldn.bsky.social
Anwai Archit @anwaiarchit.bsky.social PhD Candidate at @cppape.bsky.social lab.
Aafke Gros @aafkegros.bsky.social Check out Microscopy Nodes for handling microscopy data in Blender! Now loading .tif and OME-Zarr with big volume support :)
she/her | IPA: ˈafkə ɡrɔs
Marco Dalla Vecchia @marcodv.bsky.social Microscopy and Image Analyst Expert at ISTA
https://marcodallavecchia.gitlab.io/web
Dr. Caleb Stoltzfus @cstoltzfus.com Optics | Microscopy | Physics | Image Analysis | Anything with lasers and data science
Utz Ermel @uermel.bsky.social Scientist at bi[o]hub, Redwood City, CA
I like to make open source cryoET things.
Peter Sobolewski @psobolewskiphd.bsky.social #Duke #UCSD Alum; Recovering Academic; Research IT
@jacksonlab.bsky.social; core dev @napari.fosstodon.org.ap.brid.gy
Nila @oncemagicbraineel.bsky.social connectomics | postdoc in Rainer Friedrich's lab @FMIscience.bsky.social | first-gen academic | managing position in a one-parent family
Sumin @sumin.bsky.social Imaging Scientist👩🔬developing holotomography🔬image analysis method 💻🧐 for understanding quantitative 3D dynamics of cells, tissues, and organoids. | SVP at Tomocube Life Science.
After work: 🍻🍵☕️🎶🚗📚
WEBKNOSSOS @webknossos.org Visualize, share, segment, and annotate your large 3D images online.
Tom Herold @heroldtom.bsky.social Co-Founder of scalable minds. Building WEBKNOSSOS, a tool visualizing, annotation, managing and sharing of large 3D images.
Dave Barry @david-j-barry.bsky.social BioImage Data Analysis at @crick.ac.uk: @crick-ia-team.bsky.social
Science → Reproducible as Data Analysis → Automated
Dubliner 🇮🇪 in London 🇬🇧 | Brunch sceptic | Trophy husband | Dissipator of masculine energy
Tong Li @bioinfotongli.bsky.social
Nicolas Chiaruttini @nkiaru.bsky.social Bio-Image Analyst for the Biochemistry Department at UNIGE
https://nicolas.chiaruttini.org