GitHub @github.com The AI-powered developer platform to build, scale, and deliver secure software.
Visual Studio Code @vscode.dev The open source AI code editor
Erkison Odih @erkison.bsky.social Bioinformatics Research Fellow @ Holt Lab, LSHTM
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Sergey Nurk @sergeynurk.bsky.social Principal Bionformatician
@nanopore. Ex: Postdoctoral fellow @ NIH; Researcher @ CAB. Views are my own; #StandWithUkraine Support Ukraine!
Tilmann Weber @tilmweber.bsky.social Professor at DTU NNF Center for Biosustainability with interest in bioactive compounds, comp. biol., WGS and much more; hobby photographer. Views are my own.
Eva Heinz @evaheinz7.bsky.social Fighting mental health stigma and toxic research culture. Proud to support https://twloha.com/.
And when life gives you lemons, make a G&T.
She/Her - A @adamtaranto.bsky.social @adamtaranto.bsky.social
Tue Sparholt Jørgensen @tuesparholt.bsky.social
MinuteEarth @minuteearth.bsky.social Science and stories about our awesome planet!
Find us on Youtube: https://www.youtube.com/@MinuteEarth- L Heng Li @lh3lh3.bsky.social Associate Professor
DFCI & HMS
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Jana Batovska @mozztacular.bsky.social Research scientist interested in mosquitoes, infectious disease, nanopore seq and metagenomics. Views are my own.
Hugh Cottingham @hughcottingham.bsky.social Microbial genomics | Computational biology
Located at the University Hospital Freiburg
Jimmy Breen @wessidepraxis.bsky.social Chief Data Scientist - Black Ochre Data Labs (blackochrelabs.au)
Past President - ABACBS (abacbs.org)
Adjunct A/Professor - Australian National University (anu.edu.au)
Interested in using multiomics to study complex diseases in Indigenous Australians
Helena Cooper @helena-bethany.bsky.social Bioinformatician @ MDU PHL, Melbourne
Australian Research Data Commons (ARDC) @ardc.edu.au Enabling the Australian research community and industry access to nationally significant digital research infrastructure, platforms, skills and data collections. Enabled by #NCRIS. Visit https://ardc.edu.au/
EMBL-EBI Training @training.ebi.embl.org Delivering world-class bioinformatics training in data-driven life sciences virtually and onsite at EMBL's European Bioinformatics Institute in Hinxton, UK.
www.ebi.ac.uk/training
EMBL-EBI @ebi.embl.org EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
@abacbs.bsky.social @abacbs.bsky.social The Australian Bioinformatics and Computational Biology Society Inc. Promoting the science and profession of bioinformatics
https://www.abacbs.org
Luke Zappia @lazappi.bsky.social Bioinformatician, data scientist, software developer
Also @_lazappi_ and @lazappi@mastodon.au
Susie Grigson @susiegriggo.bsky.social Postdoc @ DOE JGI Berkeley Lab 🇺🇸 | Former PhD Student @ Flinders University 🇦🇺 | #bioinformatics #viruses #AI 🦠💻🧬 | she/her
https://github.com/susiegriggo
Nikeisha Caruana @nikeishacaruana.bsky.social Lead Bioinformatician in the Stroud Lab @UniMelb Bio21 Institute | Computational Mass Spec Multi-Omics | Chair of ABACBS Diversity, Inclusion and Accessibility Committee
Chris Seymour @iiseymour.bsky.social Software, Hardware, Machine Learning Inference.
Gaëtan Benoit @gaetanbenoit.bsky.social Postdoc researcher in bioinformatics at Pasteur institute. Scalable methods and software for metagenomics. https://github.com/GaetanBenoitDev
Alex Crits-Christoph @acritschristoph.bsky.social Computational microbiologist
I like to post about: microbial genomics, microbial ecology, evolution, micro+plant biotechnology, climate, symbiosis, virology, ag, sci publishing and policy
Dan Browne @drbfx.bsky.social Space cowboy riding a massive rock across the galaxy, wrangling genomes and herding data. PhD in Biochemistry @TAMUBCBP. Working @LanzaTech.
GitHub: https://github.com/dbrowneup
LinkedIn: https://linkedin.com/in/drbrowne
Louise Cerdeira @louisecerdeira.bsky.social Amazonian scientist. Advocate for #amazonia, #cloud, #AI, #AMR, #onehealth, #ESG.
Martin Smith @martinalexsmith.bsky.social 🧬 Genomics | RNA Biology | AI & Nanopore Sequencing | Biotech & Innovation
🔬 Director @ramacgenomics.bsky.social | A/Prof @ UNSW BABS | RNA Institute
🌍 Exploring genomes, RNA, & the future of precision medicine
🏕️🥾🎣🚴 Science, adventure & good coffee
Chloé Baum @chloebaum.bsky.social PhD in Molecular Biology and NGS specialist working at Biomics sequencing core facility of @institupasteur
Nanopore and microbiome lover.
Leo Featherstone @lfeatherstone.bsky.social Phylodynamics | The Kirby Institute & UNSW
Janelle Shane @janelleshane.com I write about the strange side of AI at aiweirdness.com
Also a laser scientist.
She/her. Colorado, USA
John Lees @johnlees.bacpop.org Pathogen informatics and modelling http://bacpop.org
(Research group leader at EMBL-EBI - http://ebi.ac.uk/research/lees/)
@juddlmj.bsky.social @juddlmj.bsky.social
Sean Carroll @seanmcarroll.bsky.social Physics, philosophy, complexity. @jhuartssciences.bsky.social & @sfiscience.bsky.social. Host, #MindscapePodcast. Married to @jenlucpiquant.bsky.social.
Latest books: The Biggest Ideas in the Universe.
https://preposterousuniverse.com/
Mark Budde @dna.bsky.social 🧬 Ranked best DNA sequencers globally 🌍| CEO Plasmidsaurus 🦕🏆| Build, build, build
Jeremy Wilkinson @jewilki.bsky.social Molecular biology, microbiome, metagenomics, runner, sports, food & drink, camper, OK State & Texas Tech alum, formerly Huttenhower lab at Harvard SPH @hutlab.bsky.social, now microbial genomics segment lead at PacBio @pacbio.bsky.social. Views are my own.
Aaron Pomerantz @aaronpomerantz.bsky.social Associate Director, Global Segment Marketing @ Oxford Nanopore Technologies - Microbiology, Infectious Disease, Synthetic Biology. The coolest discoveries are the ones you make. Tweets/views are my own.
ARC Tracker @arc-tracker.bsky.social Part human, part bot, 100% UNOFFICIAL. I track Australian Research Council grant outcomes. Bot checks outcomes announcements each min. DMs open. FAQ: https://tinyurl.com/ARC-Tracker-FAQ
James McInerney @jomcinerney.bsky.social Writing a book about horizontal gene transfer and non treelike evolution. Bioinformatics, Evolutionary Biology. Pangenomes. https://profmcinerney.substack.com/ 🇮🇪 https://mol-evol.github.io/
Tom Raaymakers @tmraaymakers.bsky.social Molecular phytopathologist at the Dutch National Plant Protection Organization/Netherlands Institute for Vectors, Invasive plants and Plant health (NIVIP)
Lee Katz @lskatz.github.io Co host of the Micro Binfie podcast
Danielle Ingle @danielleingle.bsky.social Research Fellow at the University of Melbourne
enteric bacteria, evolutionary dynamics, antimicrobial resistance, genomic epidemiology
Oxford Nanopore @nanoporetech.com 🌍Direct DNA/RNA analysis for anyone, anywhere
🧬Short to ultra-long reads in real-time for rapid insights
🔬Products for research use only
bioRxivpreprint @biorxivpreprint.bsky.social
Michael Hall @mbhall88.bsky.social Bioinformatics geek 🤓 crafting Rust-y tools 🦀 for microbial genomes 🦠 🧬.
Trying to master Dad mode 👨🍼
See what I'm up to here: https://github.com/mbhall88
Elinne Becket, PhD @bielleogy.bsky.social Assoc Prof @CSUSM | 🦠⇄🦠 MGEs & coastal metagenomes | #BlueSoup 🥣🧬 🧫 | R1→Biotech→PUI | Protective mama bear of students | She/Her
Lior Pachter @lpachter.bsky.social Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Michael Eisen @mbeisen.bsky.social Nematode antagonist
Stephen Turner @stephenturner.us Associate Professor and Research Dean at UVA School of Data Science, #Rstats enthusiast, dad, runner, guitar noise-maker. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Shila Ghazanfar @shazanfar.bsky.social
Ellis Patrick @ellispatrick.bsky.social Statistical Bioinformagician with interests in cytometry and precision medicine.
Associate Professor at the University of Sydney, Sydney Precision Data Science Centre, and Westmead Institute for Medical Research.
https://ellispatrick.github.io/
Philipp Bayer @philippbayer.bsky.social From plant breeding bioinformatics to marine eDNA to rare disease drug development!
'It is required that one man should goof gloriously for the people.'
Paul Harrison @paulfharrison.bsky.social Bioinformatician at Monash University, Melbourne, Australia.
I also use mastodon: @pfh@mastondon.online
https://mastodon.online/@pfh
My homepage is:
https://logarithmic.net/pfh/
On Twitter I was: @paulfharrison
Feargal Ryan @feargalr.bsky.social Head, computational multi-omics at Flinders University. Sci-fi, history and video games nerd 🤓👾
Eric Topol @erictopol.bsky.social physician-scientist, author, editor
https://www.scripps.edu/faculty/topol/
Ground Truths https://erictopol.substack.com
SUPER AGERS https://www.simonandschuster.com/books/Super-Agers/Eric-Topol/9781668067666
Anna Syme @annasyme.bsky.social Bioinformatics, evolution, genomes, and the Galaxy platform. Also special interest of the day: the undeciphered Harappan script
Alistair Legione @alegione.bsky.social Senior Lecturer in Veterinary Microbiology and Public Health at the University of Melbourne. Interested in genomics of bacteria and viruses in wildlife and domestic animals
Miles @miles-benton.bsky.social Technology and science nerd who also dabbles at photography and electric guitar. Associate Director of the APAC Commercial Applications team at Oxford Nanopore.
Melinda Ashcroft (PhD) @biominnie.bsky.social Infectious Disease Epidemiologist - Nontuberculous mycobacteria: Research Fellow at the University of Queensland | Microbial Genomics | Also interested in evolution, pathogenesis and #AMR of clinically relevant bacterial pathogens | She/her | Cat lover
Adrianna Turner @adriannaturner.bsky.social Researcher | Doherty Institute | Howden lab | AMR, genomics and molecular micro. Views my own. 🦠🧬
Luis Pedro Coelho @luispedrocoelho.bsky.social Content creator for Elsevier, NPG, and others
Microbiome researcher
Based in Brisbane
Matt Ritchie @mritchieau.bsky.social Lab Head in #bioinformatics developing #opensource #rstats #bioconductor packages for #singlecell #nanopore #rnaseq analysis, Melbourne, AU
Software & data: https://mritchielab.github.io
LinkedIn: https://www.linkedin.com/in/matthew-ritchie-5a468880
Lachlan Coin @lachlanjmc.bsky.social Computational biologist working on infectious disease
Leah Roberts @loolibear.bsky.social Research Fellow team leader at UQCCR, Brisbane, Australia. All things bacterial genomics, HAIs, MGEs, evolution
PacBio @pacbio.bsky.social Our mission is to enable the promise of genomics to better human health by creating the world’s most advanced sequencing technologies.
Ming Tommy Tang @tommytang.bsky.social Director of bioinformatics at AstraZeneca. subscribe to my youtube channel @chatomics. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
tommytang.bio.link
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Danny Miller, MD, PhD @danrdanny.bsky.social CODA. Dad. Interested in genetics, long-read sequencing, and ultramarathon running. Assistant Professor at University of Washington. The command line is my happy place. https://millerlaboratory.com
Karen Miga @khmiga.bsky.social Associate Professor of Biomolecular Engineering at the University of California, Santa Cruz; Associate Director, UC Santa Cruz Genomics Institute
Harriet Dashnow @hdashnow.bsky.social Asst. Prof, CU Biomedical Informatics.
#RareDisease #Genomics #STRs #bioinformatics #WomenInSTEM. Parent. Aussie. she/her
Views my own.
https://dashnowlab.org/
Img by familydestinationsguide (CC-BY)
Mikhail Kolmogorov @mishakolmogorov.bsky.social Tenure-track Stadtman Investigator at NIH/NCI. I like computational/cancer/metagenomics. The views are my own.
Randall Munroe @xkcd.com
Mike Vella @vellamike.bsky.social Head of Machine Learning at Oxford Nanopore, driving fast algorithms and research to analyze DNA/RNA/Proteins.
Chris Greening @greening.bsky.social Professor & NHMRC Fellow at Monash University, Melbourne. Using microbes to tackle global challenges in health and sustainability. #FirstGen 🐶🇦🇺🌈🎹🌱
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Tim Stinear @tstinear.bsky.social Microbiologist
Calum Walsh 🇮🇪🇦🇺 @calumwalsh.bsky.social Microbiome Bioinformatician
Centre for Pathogen Genomics
Doherty Institute
University of Melbourne
https://scholar.google.com.au/citations?user=CV66a6sAAAAJ&hl=en
Psyduck is my spirit animal.
Claire Gorrie @clairegorrie.bsky.social Postdoc with MDU @dohertyinstitute @unimelb
Interested in bacterial genomics and bioinformatics, particularly re: AMR transmission in hospitals.
Views my own. She/her.
Phil Ashton @flashton.bsky.social Genomic epidemiologist at the Centre for Genomic Pathogen Surveillance at Oxford. How can microbial genomics improve health in high infectious disease settings?
Willem van Schaik @wvschaik.bsky.social Microbiology, microbiome, antimicrobial resistance. Sometimes UK politics. Head of Research of the School of Infection, Inflammation and Immunology, University of Birmingham. Also Co-Director of @target-amr.bsky.social.
Michael Baym @baym.lol Associate Prof @HarvardMed. Microbial evolution, antibiotic resistance, mobile genetic elements, algorithms, phages, molecular biotech, etc. Find me under “floating dumpster fire”
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Rob Lanfear @roblanfear.bsky.social phylogenetics, molecular evolution, some genomes, kids, dogs, and eclectic hobbies none of which I am much good at but I think for me that's the point
Ben Vezina @bananabenana.bsky.social Computational Biology | Microbiology | Molecular Biology postdoc.
Right now I do lots of stats, ML, metabolic modelling, vis, and quantitative genomics
can we pls fix greenhouse emissions, gov, pls
Marit Hetland @genomarit.bsky.social Bioinformatician at Stavanger University Hospital & PhD candidate at University of Bergen looking at Klebsiella genomics (and sometimes other bugs).
Josh Quick @scalene.bsky.social UKRI Future Leaders Fellow, University of Birmingham
Alex Tokolyi @alextokolyi.bsky.social Postdoc in medical genomics at the New York Genome Center. alextokolyi.com
Margaret Lam @margaretlam.bsky.social Research Fellow at Monash University - microbial genomics, Klebsiella, Acinetobacter, plasmids
Yu Wan 万宇 @wanyuac.bsky.social Research fellow in medical microbiology at the University of Liverpool in the UK, studying bacterial genomics, evolution, antimicrobial resistance, and infectious disease epidemiology using bioinformatics and computational biology.
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Titus Brown @titus.idyll.org I am not a deep man, but I have many shallows. ctbrown@ucdavis.edu, http://ivory.idyll.org/blog/.
Jonathan Jacobs @bioinformer.bsky.social UofArizona #Aggie > UofMaryland PhD > NIH/NCI PostDoc > > > ATCC #Genomics, #Bioinformatics, Data Authenticity, #BioSecurity. 🎲♟️👾🎮 🎸 🧪 🧬 🖥 🦠🚀🏎️ he/him.
https://bioinformer.substack.com
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Olin Silander @osilander.bsky.social DNA
Matthew Croxen @mcroxen.bsky.social public health 🦠 genomics | associate professor | personal account (opinions my own) | 🎸⚽📷♨️🥷 he/him. 🇨🇦 ✊🏿✊🏾✊🏽.
Erin Young @erinyoung.bsky.social Public Health #Bioinformatician. Wants to sequence ALL THE THINGS. Personal account with alternative spellings and grammar structures. She/her
Dr Emma Hodcroft @firefoxx66.bsky.social Die Virenjägerin! 🏹🧬!
Using programming & phylogenetics, I study & track viruses. Co-developer of Nextstrain, based at Swiss TPH & Uni Basel.
Founder of CoVariants.org, co-founder of @pathoplexus.org
I like 🐈 & 🛫
@firefoxx66@mstdn.science