Kutand Alkım Bayer @kutandalkim.bsky.social IZTECH-Chemistry, I like to be Polymath(learning different subjects), Polygot(interested in the learning different languages) comments and opinions are my own RT≠ is not endorsement (he/him)
Venkat @venkatamutyala.com Platform Engineer/CTO @ a PaaS startup.
Touching Apache HTTP Server since I was 12.
SQL since I was 15.
I'm also a "SQL expert" and can prove it.
Feel free to tag me with your DevOps/Platform/K8s questions!
AWS/GCP/Azure/DigitalOcean/Hetzner
Python/C#
nate s jacobs @natesjacobs.bsky.social surfer, dad, (former) neuroscientist, research technologist, entrepreneur, open science advocate, sometimes writer.
Richard Wubbolts @rwub.bsky.social Cell biologist, fascinated by (open) science, biochemistry, Extracellular Vesicles, Immunology, (fluorescence) microscopy and 3D printing. Heading Centre for Cell Imaging @ VetMed Utrecht University (www.cci.sites.uu.nl), orcid: 0000-0001-8661-7594
JJW @eljjw.bsky.social
Fabián @villena.cl
Paula Llanos @paulallanos.bsky.social Image analyst @ Broad Institute Imaging platform
Rowan Cockett @row1.ca I talk about computational #openscience communication and science publishing. On the jupyterbook.org & @mystmd.org teams, co-founder of @curvenote.com & @continuous.foundation.
Mark Hartmann @mphartmann.bsky.social Scientist at DKFZ and NCT Heidelberg
#epigenetics #stemcells #leukemia #colorectalcancer #multiomics #precisiononcology
#oncofetal #reprogramming
#plasticity
www.translational-cancer-epigenomics.de
Ricardo Henriques @henriqueslab.bsky.social @AIOpticalBioLab.bsky.social. Group Leader #ITQB & H. Prof #UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own
- henriqueslab.org -
Florian Jug @florianjug.bsky.social Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.
Beth Cimini 🔬💻📊 @bethcimini.bsky.social She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.
Stephen Royle @steveroyle.bsky.social I'm into chord changes and cell biology.
Professor - University of Warwick. Director - The Company of Biologists. Views are my own and not those of any organisation I am associated with.
Mastodon: @steveroyle@biologists.social
Lab: https://roylelab.org
Virginie Uhlmann @virginieuhlmann.bsky.social Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.
Johannes Hohlbein @hohlbeinlab.bsky.social Single-molecule stuff, 🔬, 🦠 , 🧬, ☕, BTU, WUR, he/him, 🇩🇪->🇨🇿->🇩🇪->🇬🇧->🇳🇱+🇩🇪, Pubs: https://scholar.google.nl/citations?hl=en&user=WZZAydwAAAAJ&view_op=list_works&sortby=pubdate
Erick Ratamero @erickratamero.com Cross-posting from idlethumbs.social/@ratamero
half respectable professional (can you believe they let me manage data at EMBL?), half nerdy gremlin. views my own etc etc. he/him/ele
https://erickratamero.com
Elnaz @mycroscopy.bsky.social Microscopist and image analyst in the making. Core facility staff at BIU @helsinkiuni and loving it.🔬👩🏻🔬👩🏻💻
Jean-Yves Tinevez @jytinevez.bsky.social Research engineer and core facility manager at the Institut Pasteur
https://research.pasteur.fr/en/team/image-analysis-hub/
Everything #TrackMate #Mastodon-sc (the tool to track lineages in microscopy videos, not the social networks etc).
Views are my own
DrLachie @drlachie.bsky.social BioImage Analyst at @WEHI_research. Foodie, geek, Dad. Functions on coffee and red wine. Bringer of #MicroscopistsNightmares. He/Him
Jim Rowe @botanicaljim.bsky.social Royal Society University Research Fellow at the University of Sheffield. Interested in how ABA patterns control water fluxes in leaves using ABA biosensors and image analysis.
https://www.sheffield.ac.uk/biosciences/academic-staff/people/jim-rowe
Elisabeth Kugler @kuglerelisabeth.bsky.social Director Zeeks - Art for Geeks | Biomedical Image Analyst | Science Communicator | Host of the Keep It Science Podcast
www.zeeks-artforgeeks.com
NFDI4BIOIMAGE @nfdi4bioimage.bsky.social NFDI4BIOIMAGE, a consortium of the NFDI in Germany, is a legally non-independent collaboration project. It focuses on research data management for bioimaging and image analysis. The consortium does not act autonomously towards third parties.
Nicolas Chiaruttini @nkiaru.bsky.social Bio-Image Analyst for the Biochemistry Department at UNIGE
https://nicolas.chiaruttini.org
Carsen Stringer (she/her) @computingnature.neuromatch.social.ap.brid.gy group leader @ HHMIJanelia, thinking about thinking, 🔬#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | Ⓥ | […]
[bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]
Stefania Marcotti @lankylaste.bsky.social Data and image analysis for all things bio | Computational tinkerer | Researcher | Bioimage analyst
Anna Klemm @ahklemm.bsky.social BioImage Analyst
Head of BioImage Informatics, SciLifeLab
NBIS, Sweden
https://www.scilifelab.se/units/bioimage-informatics/
Nico Stuurman @nicostuurman.bsky.social
GloBIAS @globias.bsky.social Global BioImage Analysts’ Society, a registered non-profit association. Join us to shape BioImage Analysis on a global level. www.globias.org
ilastik-team.bsky.social @ilastik-team.bsky.social Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
Joanna Pylvänäinen @jwpylvanainen.bsky.social Image analysis | Infrastructure | Education | Post-doctoral researcher
Constantin Pape @cppape.bsky.social Group leader @ Uni Göttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
Simon F. Nørrelykke @simonfn.bsky.social Executive Director, EPFL Center for Imaging |
Previously HMS, ETH, Princeton, MPI-PKS, LENS, Niels Bohr Institute, University of Oxford, Aarhus University.
https://imaging.epfl.ch
𝙲𝚞𝚛𝚝𝚒𝚜 𝚁𝚞𝚎𝚍𝚎𝚗 (@ctrue@mstdn.science) @ctrue.bsky.social Not as bad as I feared, but not as good as I hoped.
Kyle Harrington @kyleharrington.com Images, AI, ML, and ALife.
Former: @hampshirecolg
@brandeisuniversity.bsky.social
@harvardmed.bsky.social
@uidaho.bsky.social
@hhmijanelia.bsky.social
@mdc-berlin.bsky.social
@ORNL.
Now @biohub.org.
Opinions are mine.
Edwin Hernández-Garzón @elfulbito.bsky.social Core Facility Manager
@ci2a.bsky.social
. Biologist, 🔬 enthusiast. Elise's companion. Father of two little monsters.
Stéphane Rigaud @strigaud.bsky.social Bio-image Analyst, Computer scientist, and plenty of other things that end in «-ist»
HMS Image Analysis Collaboratory @hms-iac.bsky.social News from the Image Analysis Collaboratory at Harvard Medical School. Teaching, research and promoting best practices in Bioimage Analysis.
Get in touch: https://iac.hms.harvard.edu/.
Jonas Windhager @jwindhager.bsky.social Bioimage Analyst / RSE at the SciLifeLab BioImage Informatics Unit
Juan Nunez-Iglesias @jni.fosstodon.org.ap.brid.gy Core dev and co-founder napari.org
Core dev scikit-image.org
Co-author elegant-scipy.org
Research Fellow at https://www.monash.edu/researchinfrastructure/eresearch […]
[bridged from https://fosstodon.org/@jni on the fediverse by https://fed.brid.gy/ ]
Adam Tyson @adamltyson.com Head Research Engineer at Sainsbury Wellcome Centre, UCL. I lead @neuroinformatics.dev & @brainglobe.info. We build open source software for neuroscience and machine learning.
Runner, cyclist, sandwich enthusiast.
https://adamltyson.com
Martin Schätz @schatzcz.bsky.social BioImage Analysis at Vinicna Microscopy Core Facility & assistant professor at UCT Prague focused on medical signal and image analysis. Spearheading the CzechBIAS.
Federico Gasparoli @fedegasparoli.bsky.social Director of the Core for Imaging Technology & Education 🔬💻
Harvard Medical School
Elena Nicolay @enicolay.bsky.social Doctoral Researcher at mTox lab, @ufz.de Leipzig 🧪🌊 | Intrigued by #EntericNervousSystem and #InnateImmunity in #Zebrafish
🐟🔬💻 https://www.ufz.de/index.php?de=50905
Guillaume Witz @guiwitz.bsky.social Curious scientist and classical music enthusiast. Currently Bioimage Analyst and Data Scientist at the Data Science Lab of the University of Bern. Previously @epfl, @harvard, @biozentrum
Nico DF @nicodf.bsky.social Biochemist, microscopy enthusiast, image analysis nerd
Powered by Wishful Thinking™
Researcher @ Neurophysiology Lab, IMBICE (http://imbice.gov.ar), La Plata, Argentina
Kevin Yamauchi @kevinyamauchi.bsky.social building open source image analysis software for science
🔬 co-founder and member of @image.coop
🏝️ core developer @napari.org
https://kevinyamauchi.github.io/
Marvin Albert @m-albert.bsky.social Image Analysis and Data Management at the Department of Biosystems Science and Engineering of ETH Zürich in Basel
Stephan Preibisch @preibischs.bsky.social Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia
Eugene Katrukha 🇺🇦 @ekatrukha.bsky.social Biophysics, cytoskeleton and self-disorganization
Martin Weigert @maweigert.bsky.social Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ
David Gaboriau @dgaboriau.bsky.social Imaging Scientist at Facility for Imaging by Light Microscopy (FILM) @imperialcollegeldn.bsky.social
Previously FILM facility manager.
Dad, Cell biologist, PhD/postdoc
@uniofcam.bsky.social.
Opinions my own.
Jeff Saucerman @jsauce7.bsky.social Professor of Biomedical Engineering and Cardiovascular Medicine at UVA. Systems biology to discover drugs for heart disease. Hiking with my dog in Shenandoah NP, around Charlottesville. https://engineering.virginia.edu/faculty/jeffrey-saucerman
Jonathan Striebel @jstriebel.bsky.social Code Enthusiast & Software Engineer, he/him.
💻 Python, Medical Image Processing, Distributed Computing, Data Science & ML
🌐 jonathanstriebel.de
📝 codical.org
Anthony Dornan @dornan.bsky.social 🔬Deputy Lead - Cellular Analysis Facility - Shared Research Facilities MVLS, University of Glasgow.
Fly Geneticist that liked Microscopy - now a Microscopist that likes Genetics.
All views - generally - my own. (He/Him) 🇨🇦🏴
ORCID: 0000-0002-5228-2893
@ofragolani.bsky.social @ofragolani.bsky.social
Laura R. de la Ballina @larual.bsky.social Biochemist with a passion for bioimage analysis.
Mackenzie Weygandt Mathis @trackingactions.bsky.social Scientist 👩🔬 & EPFL Assoc Prof 🇨🇭 | Devloper of DeepLabCut.org , 🦓 cebra.ai | neuroscience & ML 🧠 mackenziemathislab.org
Aneesh Sathe @aneeshsathe.com aneeshsathe.com
🧪🧬💻🤖🔬🦠🩺💊🐍
Rodrigo Fernandez-Gonzalez @rodrigofg.bsky.social Epithelial morphogenesis, microscopy and image analysis. Cytoskeleton and cell adhesion. Author of pyjamas.readthedocs.io and bitbucket.org/rfg_lab/junkie. Keeping a group of brilliant scientists entertained at www.quantmorph.ca. Also marathons and sushi.
Zac Swider @zacswider.bsky.social Biologist turned programmer. Working on data pipelines for high throughput imaging. Mostly posting about Python and Rust but no guantees :)
ayakimovich.bsky.social @ayakimovich.bsky.social I am a group leader at Helmholtz in Görlitz, Germany and an Associate Prof of CS at Uni Wroclaw, Poland. My group is working on Machine Learning for Infection and Disease. Personal account and opinions. Website: ayakimovich.github.io / www.casus.science
BioVoxxel (Jan Brocher) @biovoxxel.de BioImage Analyst, Consulting, Customized Analysis Programming Founder, PhD in biology, Fiji/ImageJ, Inkscape, Java
🧪🔬💻
🇩🇪 🇬🇧 🇪🇦
Homepage: biovoxxel.de
All relevant BioVoxxel Links: linktr.ee/biovoxxel
LinkedIn Newsletter: http://bit.ly/46mYBL7
Jacques Augenstreich @augenstreich.bsky.social Biomedical Research Scientist - CVPath institute.
Image analysis shenanigans, mycobacterium tuberculosis, macrophages and membrane dynamics
Teun Huijben @teunhuijben.bsky.social Scientist/PostDoc with Loïc Royer at Biohub, San Francisco 🔬 image analysis | localization microscopy | machine learning, 🇳🇱 by bike 🚲
📍San Francisco
Sara McArdle @saramcardle.bsky.social Staff Scientist at the La Jolla Institute Microscopy and Histology Facility. I love cat videos and microscopy images and I believe that Matlab is better than Python :)
Caro Barisch @carobarisch.bsky.social Associate professor & cellular microbiologist @CSSB-Hamburg, @FZBorstel and @UniHH! Interested in host-pathogen interactions 🧪🦠🧫, lipids and microscopy 🔬! Mother of twins. T1D. www.barischlabcssb.com
Goran LAKISIC @goranlakisic.bsky.social Cellular Biologist, Microscopy, Image analysis, Geek, Dad
Brian Northan @truenorth-ia.bsky.social Contract Research and Development Engineer, Image Processing. XC skier. Stockade-athon 15 km Running Road Race Director.
Jason Yang @jasonyanglab.org Assistant Professor at Rutgers New Jersey Medical School | Systems Biology, Synthetic Biology, Machine Learning, Antibiotic Resistance, Tuberculosis, Heart Failure, Immunoengineering
Paul Villoutreix @paulvilloutreix.bsky.social We develop machine learning frameworks to decode the geometry and topology of tissue development from spatial omics data | Junior Professor INSERM & Group Leader Turing Center for Living Systems | https://bioml.lis-lab.fr
Clément Caporal @caporalclement.bsky.social PhD Student @LabOptBio. In love with education, sciences, and poetry. (Bioimage analysis) He/him
Giuseppe Di Caprio @giudica.bsky.social Associate Professor (Senior Lecturer) at the University of Strathclyde. PI at CeMi. Interested in Smart Microscopy, Cell Engineering, Bioimage Analysis and Organs-On-Chip. Formerly Harvard and Federico II 🏳️🌈 📍Glasgow
https://dicaprio.bioe.strath.ac.uk
Ken Brewer @kenibrewer.bsky.social Open-source x Science - Dev Advocate @ Seqera
Bioimaging enthusiast
Michael Doube @mdoube.bsky.social Pixel herder
Lars Hubatsch @larshubatsch.bsky.social Hybrid Experimentalist/Theorist (MPI-CBG & MPI-PKS). Interested in developmental biology, pattern formation, and quantitative (single molecule) imaging: how to fit physical mechanisms out of complex data.
Maria Cardei @mariacardei.bsky.social PhD student. Human-AI Technology Lab @ UVa. AI for health, computational behavior modeling, data science.
Nature enthusiast. Rescue dog mom. Gardener.
https://mariacardei.github.io/
Carlo Barnaba 🇮🇹🇲🇽 @barnabalab.bsky.social I lead a young, vibrant research group at the University of Kansas - Pharmaceutical Chemistry. My lab works on metabolic adaptation: how our cells rewire their metabolism when challenged by chemical and nutrient stressors.
Volodya Gelfand; Northwestern University @vgelfand.bsky.social Cytoskeleton; microtubules; motors; Drosophila
https://www.gelfandlab.org/
Darren Thomson @darrenthomson.bsky.social Imaging Scientist @mrccmm MRC Centre for Medical Mycology at UoExeter. Applying and resourcing MYCOscopy to understand human fungal pathogens - always keen to chat
Loïc A. Royer 💻🔬🧪 @loicaroyer.bsky.social Sr. Director of Imaging AI @biohub. Researcher at the meeting point of #AI, #Microscopy, and #Biology using #zebrafish as model — co-creator of @napari_imaging and #Omega. #devbio #zebrahub #deeplearning #lightsheet #Imaging #dataviz
Joel Lüthi @joelluethi.bsky.social Head of Research and Development of the BioVisionCenter at the University of Zurich
Cédric Moisy @cedric-moisy.bsky.social Research scientist 🍇🖥️🌱🦠🔬
Plant Pathology | 3D+t imaging | MRI | Xrays tomography | IA | Image Analysis 🔎☢️🧲
Trunk diseases | Fungal Pathogens | Genetics | Molecular Biology | Grapevine | Breeding & Selection
French Wine and Vine Institute, France 🇫🇷
Gaëlle Letort @gaellel.bsky.social Bioimage analysis and mathematical modelling, mainly in developmental biology. Research engineer @CNRS.bsky.social @pasteur.fr
Richi Paul @erpel.bsky.social phd student working on bayesian methods in bioimage analysis; @fz-juelich.de, @hds_lee & @lmu.de; bsc+msc in comp sci @univie.ac.at; based in karlsruhe; ripaul.github.io
IMAG'IC @imag-ic.bsky.social The Institut Cochin photonic imaging facility @upcite.bsky.social @inserm.fr @cnrs.fr
#Microscopy #FLIM #STED-FLIM #BioImaging #DataBase #MultiphotonFLIM #Intravital-Imaging #HistoCytometry #TissueClearing #Biosensors #FRET-FLIM #SMLM #ExM #Deeplearning
Agustin Corbat @acorbat.bsky.social Physicist, image analyst and 🔬 | Automation and teaching fan #Python #Pi | #bioimage #analyst at @biif_sweden
Octavio Reyes-Matte @octavio-rm.bsky.social PhD student
Waterfowl appreciator 🦆🪿🦢
Bioimage analysis 🔬, Quantitative Biology📊 and Deep Learning 💻
Trying to understand the diversity of bacterial cell size and its evolution
From 🇨🇱 in 🇩🇪
he/him
dennis lam @computing.bsky.social i live in the bay area and work in fintech. stream of consciousness account. here for a fun time
Pooja Middha @poojamiddha.bsky.social Genetic and Cancer Epidemiologist | Scientist at @RegeneronDNA | Alum @UCSFCancer, @dkfz, @UniHeidelberg, @umichsph | Views are my own 🇮🇳🇩🇪🇺🇸
Garfield @elgatogarfield.bsky.social Tengo un podcast https://open.spotify.com/show/1jc2qjIwLCXnyQTXqLMa34?si=f860f6d3715b4afb
Pequeño león
Mejor arquero según mi humilde opinión
Sígueme y te sigo
El/He/His/Miau
Cote Briceño @canetaba.bsky.social Ella/She/Her
Amo a Garfield
Nico S. Estrada (Niconi) @niconikun.bsky.social Nothing left to declare. | SP/EN/GR | Ingeniero Aeroespacial | Diseñador gráfico de hobby | Python/C++
@malcolmmf.bsky.social @malcolmmf.bsky.social
Jason Kelly @jasonrkelly.bsky.social co-founder and CEO at Ginkgo Bioworks
Former Chair of National Security Commission on Emerging Biotechnology
Sri Kosuri @srikosuri.bsky.social Cofounder/CEO Octant
BoD Ginkgo Bioworks
Defense Science Board for Emerging Biotech
Fmr: Associate Professor, UCLA
Elad Gil @eladgil.bsky.social Entrepreneur and Investor
Eladgil.com
Dr. Fatma Kaplan @drfatmakaplan.bsky.social CEO & Founder @Pheronym.com alumna of @Indbio @activatefellows @cyclotronroad
I am a #scientist #inventor #entrepreneur
I work on #biocontrol #pheromones #nematodes #astronematode #wormsinspace #climatesmart #agriculture