Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health 🧬🦠🔎
Associate Professor of Computer Science, Rice University 🦉💻
Treangen Lab website: www.treangenlab.com
Nick Stroustrup @nstroustrup.bsky.social A British/American group leader at @crg.eu . We study the biology of aging using molecular genetics, engineering, systems biology, and probabilistic machine learning.
Lab page: http://lifespanmachine.crg.eu
Jase Gehring @skyjase.bsky.social scientist at UC Berkeley inventing advanced genomic technologies
lover of molecules, user of computers
https://scholar.google.com/citations?user=63ZRebIAAAAJ&hl=en
Josh Marshall @joshtpm.bsky.social Founder & reigning monarch at TPM. Lapsed historian. Hand tool woodworker. Jew.- M Marc Lipsitch @mlipsitch.bsky.social Professor of Epidemiology Harvard Chan SPH, Director, @ccdd-hsph.bsky.social. Views my own.
Bill Hanage @billhanage.bsky.social Refugee from Twix. Arsenal fan and Professor of Epidemiology at Harvard T. H. Chan School of Public Health. Opinions my own.
Jouni Sirén @jltsiren.bsky.social Researcher at UCSC Genomics Institute. Space-efficient data structures and pangenome graphs.
Cole Trapnell @coletrapnell.bsky.social working on single cell genomics & developmental genetics at
@uwgenome. scientific co-founder, @scalebio
Rósa S. Gísladóttir @rosagisladottir.bsky.social Linguist, cognitive neuroscientist and wannabe geneticist. Associate Professor at University of Iceland. Views are my own. https://uni.hi.is/rosas and https://english.hi.is/staff/rosas
Oliver Stegle @oliverstegle.bsky.social Scientist at DKFZ and EMBL in Heidelberg, loving stats, genomics and genetics. @OliverStegle@genomic.social. For group news see @steglelab.bluesky.social- J Jared Simpson @jaredsimpson.bsky.social
Melissa Wilson @sexchrlab.bsky.social Geneticist. Parent. Studying sex chromosomes and sex as a biological variable in disease.
Posts and opinions are my own.
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:40 | 10k 37:40 | HM 1:27:43 | M 3:39:06
Ryan Layer @ryanlayer.bsky.social Making genomics faster layerlab.org
Daniela Witten @danielawitten.bsky.social dorothy gilford endowed chair and professor of statistics/biostatistics at university of washington, all views my own
@junhyongkim.bsky.social @junhyongkim.bsky.social A genomics cat, sometimes Christopher H. Browne Professor of Biology at Penn. All posts my opinion only.
Erna Magnúsdóttir @e-rna.bsky.social Associate Professor at the University of Iceland Faculty of Medicine. I study transcriptional and epigenetic control of cell fate decisions.
Manuel Rivas @mrivas03.bsky.social Stanford professor. Interested in human genetics, AI, statistical modeling, entrepreneurship.
https://rivaslab.stanford.edu
Daniel E. Weeks @statgendan.bsky.social Statistical geneticist. Professor of Human Genetics and Biostatistics at the University of Pittsburgh. Assiduously meticulous.
Yoav Gilad @ygilad.bsky.social Associate Dean for data science, and Professor of Medicine and Human Genetics at the University of Chicago.
Hani Goodarzi @genophoria.bsky.social Core Investigator @ Arc Institute | Associate Professor @ UCSF | {Computational, Systems, Cancer, RNA} biologist | Co-founder @exaibio @vevo_ai
Ryan Wick @rrwick.bsky.social Bioinformatician at the Centre for Pathogen Genomics at the University of Melbourne
Antoine Limasset @npmalfoy.bsky.social CNRS researcher in bioinformatics
Lille, France (Bonsai team).
I develop efficient computational methods to analyze massive sequencing data, creating scalable tools for genomics, transcriptomics, and metagenomics.
https://malfoy.github.io/
birki @birkir.bsky.social tiny language model
Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social Assist Dir. @DNALC @CSHL
Erik van Nimwegen @erikvannimwegen.bsky.social Gene regulatory networks and genome evolution. How do single cells make up their minds?
@NimwegenLab@mstdn.science
@NimwegenLab on twitter. Sorry X.
Jeff Spence @jeffspence.github.io assistant professor at ucsf interested in genetics, statistics, etc…
jeffspence.github.io- L Heng Li @lh3lh3.bsky.social Associate Professor
DFCI & HMS
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
@jjakobsdottir.bsky.social @jjakobsdottir.bsky.social
Marcel Schilling @mschilli.com I am a Bioinformatician whose research focusses on post-transcriptional regulation in the context of Alzheimer's Disease.
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https://mschilli.com
Popehat @kenwhite.bsky.social Defunct account of Ken White, criminal defense attorney and First Amendment litigator. Co-host of Serious Trouble podcast and writer at The Popehat Report. Opinions here are my own. Decent people fight evil.
Signal: KenWhite.1969
Adam Rutherford @adamrutherford.bsky.social I had a marvellous time ruining everything.
Professor of Genetics @UCL, Public Humanities Fellow @SAS. Ex-President of @Humanists_UK Genetics, race, eugenics, books, cricket, +–=÷×
@kbjmanagement
adamrutherford.com
Craig Kaplan @triggerloop.bsky.social Professor, Department of Biological Sciences, University of Pittsburgh. RNA polymerase II mechanism, classic films, #classiccountdown once in awhile- A @athmapai.bsky.social @athmapai.bsky.social
Engelhardt Research Group @thebeehive.bsky.social Engelhardt Research Group at Stanford University and Gladstone Institutes. Statistical genomics, live-cell imaging, wearable data, cancer immunology, reproductive health.
Elisabeth Bik @elisabethbik.bsky.social Science integrity consultant and crowdfunded volunteer, PhD.
Ex-Stanford University. Maddox Prize/Einstein F Award winner
NL/USA/SFO.
#ImageForensics
@MicrobiomDigest on X.
Blog: ScienceIntegrityDigest.com
Support me: https://www.patreon.com/elisabethbik
Phillip Compeau @phillipcompeau.bsky.social I came over here to shitpost.
Computational biology (teaching) professor
"Oh you're the guy who co-founded Rosalind" -- a few people, not many
Pierre Peterlongo @pierrepeterlongo.bsky.social Inria Senior researcher.
Head of the https://team.inria.fr/genscale/ at Inria and Irisa.
Algorithmics for sequencing data analyses, genomics and metagenomics.
Delaney Sullivan @delaneyksull.bsky.social UCLA-Caltech MD/PhD student
Stanford ‘16
Karyn Meltz Murphy @karynotype.bsky.social Come for the science. Stay for the snark.
sina b @sina.bio HHMI Hanna Gray Fellow at @UCBerkeley w/ @airstreets. PhD @caltech, Math & ME BS @mit. I enjoy drinking tea, riding bikes, taking photos, and exploring nature.
Laura Luebbert @handle.invalid Sabeti lab PostDoc @ Broad Institute of MIT an Harvard
genetics, compbio, & viruses
www.lauraluebbert.com
Brent Pedersen @brent-p.bsky.social dad
creativity in: genomics, bioinformatics and solving problems
languages: rust, nim, python, go, c, bash, awk, js
Gunnar Rätsch @gxxxr.bsky.social I love large biomedical data.
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Óðinn Melsted @odinnmelsted.bsky.social Austrian-Icelandic historian, assistant professor @MaastrichtUniversity, working on transnational history of energy, technology and environment
Janet Kelso @janetk.bsky.social Genomics, bioinformatics, ancient DNA. 🇿🇦Scientist at the Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany Germany
Li Song @mourisl.bsky.social 毛利元光. Assistant Prof at the Department of Biomedical Data Science at Dartmouth College. Research on bioinformatics, algorithms. Lab page: mourisl.github.io
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Sten Linnarsson @sten.linnarsson.org Professor of molecular systems biology at Karolinska Institutet, Sweden. On a mission to delete brain cancer using DNA therapy. Email: sten.linnarsson@ki.se
Tuuli Lappalainen @tuuliel.bsky.social Professor at KTH, NY Genome Center, SciLifeLab, working on functional genomics and human genetics.
James Bonfield @jbonfield.bsky.social Walker, archer, and volunteer woodland warden by weekend, and bioinformatics software engineer and general geek by weekday.
My favourite prime is 15551, my favourite colour is, obviously, octarine, and I love nothing more than being immersed in nature.
David A Knowles @davidaknowles.bsky.social machine learning and functional/statistical genetics. Associate Prof @Columbia and Core Faculty @nygenome. he/him/his. https://daklab.github.io/
Ewan Birney @ewanbirney.bsky.social Director of EMBL-EBI. I have an insatiable love of biology. Consultant to ONT and Cantata (Dovetail)
Davis McCarthy @davisjmcc.bsky.social Head, Bioinformatics and Cellular Genomics Lab,
St Vincent's Institute of Medical Research, Melbourne. Stats, AI/ML, bioinformatics, genomics, single-cell.
https://www.svi.edu.au/researchers/dr-davis-mccarthy/
Matt Loose @minomatt.bsky.social Sequencing, adapting and exploring genomes.
https://linktr.ee/matt.loose
Benoit Bruneau @benoitbruneau.bsky.social Cardiac developmental biologist. Oakland and San Francisco. Hi friends! 🇨🇦
Daniel MacArthur @dgmacarthur.bsky.social Genomics, big data, open science, diversity. Director of the Centre for Population Genomics, focused on building a more equitable future for genomic medicine. Opinions my own.
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Kasper D Hansen @kasperdhansen.bsky.social Professor @ JHU, statistical genomics, www.hansenlab.org
Maria Nattestad 🧬💻 @omgenomics.com Co-founder OMGenomics Labs. Creator of Circa https://circa.omgenomics.com, Ribbon, YouTube.com/omgenomics. Worked on DeepVariant+DeepConsensus at Google.
Ryan Hernandez @rdhernand.bsky.social From busboy/car washer to population geneticist at UCSF, co/Director of the BMI PhD program & UCSF PREP/PROPEL Programs!!!
Nick Loman @pathogenomenick.bsky.social Public health (meta)genomics & bioinformatics, Prof @unibirmingham.bsky.social, Director @imibirmingham.bsky.social & @climb.ac.uk
Haky Im @hakyim.bsky.social Statistician doing genomic data science, faculty the University of Chicago, Korean, Argentinean, American. Love kimchi, math, science, books with beautiful prose.
Jonathan Eisen @phylogenomics.bsky.social Professor at UC Davis
Work: phylogenomics & microbiomes; wildlife and aquatic microbiology; #openscience;
Other: #birds; baseball; T1D
Lab phylogenomics.me
Pics jonathaneisen.smugmug.com
Links linktr.ee/jonathaneisen
TED go.ted.com/6WPm
Julia Evans @b0rk.jvns.ca programming and exclamation marks
blog: jvns.ca
zines: wizardzines.com
Nicolas Robine 🇪🇺🇫🇷🇺🇸 @nicorobine.bsky.social Artisanal Genomics since 2002. Mostly in English, sometimes in French. #NoPasaran
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Stephen Turner @stephenturner.us FIeld guide. Quartermaster. Associate Professor and Research Dean at UVA School of Data Science. Views my own.
Web: https://datascience.virginia.edu/people/stephen-turner
Newsletter: https://blog.stephenturner.us
Chris Miller @chrismiller.science I study cancer at Washington University in St Louis. Cancer Genomics, Bioinformatics, Data Viz, Tumor Evolution, AML, Immunotherapy, Irreverent humor 🧬 🖥️ mostly @chrisamiller on other platforms
Carl T. Bergstrom @carlbergstrom.com Professor, UW Biology / Santa Fe Institute
I study how information flows in biology, science, and society.
Book: *Calling Bullshit*, http://tinyurl.com/fdcuvd7b
LLM course: https://thebullshitmachines.com
Corvids: https://tinyurl.com/mr2n5ymk
he/him
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Liana Lareau @lianafaye.bsky.social Associate Professor of Bioengineering, Berkeley. Living in an RNA world. lareaulab.org
Francisco De La Vega @ribozyme.bsky.social Geneticist & Computational Biologist. All opinions are my own.
Chris Saunders @ctsa.bsky.social Rare disease and cancer analysis models for sequencing data. Art school survivor. Views my own.
Shane McCarthy @mcshane.bsky.social Genome assembly at Wellcome Sanger Institute and University of Cambridge
Tony Cox @coxtonyj.bsky.social Bioinformatics, string algorithms, DNA sequence analysis. Formerly Solexa/Illumina, bioinformatics consulting at genomerics.com, now quantum error correction at @riverlane.com https://www.linkedin.com/in/coxtonyj/
Ingileif Hallgrímsdóttir @ingileif.bsky.social
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Albert Vilella, PhD. @albertvilella.bsky.social Bioinformatics Scientist / Next Generation Sequencing, Single Cell and Spatial Biology, Next Generation Proteomics, Liquid Biopsy, SynBio, AI/ML in biotech // http://albertvilella.substack.com
Sergey Koren @sergek.bsky.social Scientist at NHGRI/NIH. Mapping complete genomes, finished a couple, working on more 🐮🐟🐒. Posts are my own opinion.
nick (he/him) @nlbray.bsky.social Cool guy. Part-time dog pillow.
Nicholas Mancuso @nmancuso.bsky.social Associate Professor at USC. Statistical genetics of gene regulation and complex traits. Genetics/Stats/ML. Husband and father. GA➡️CA. He/him. Views are mine.
www.mancusolab.com
Jonathan Pritchard @jkpritch.bsky.social My lab at Stanford studies human population genetics and complex traits.
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Lior Pachter @lpachter.bsky.social Bren Professor of Computational Biology @Caltech.edu. Blog at http://liorpachter.wordpress.com. Posts represent my views, not my employer's. #methodsmatter
Harold Pimentel @hjp.bsky.social Assistant prof at UCLA using the Bayes for the genomes https://pimentellab.com