Dan Quintana @dsquintana.bsky.social Professor of Psychology at the University of Oslo | Behavioral neuroendocrinology, psychophysiology, and meta-science 🇦🇺🇨🇴🇳🇴
Damiano Spina @damianospina.com PhD in Computer Science. Information Retrieval, Human-AI Cooperation, Evaluation.
@rmitcomputing.bsky.social | @admscentre.org.au | @internetobservatory.org.au
🤸🏼♂️Contramestre Camaleão, Capoeira ACDP.
🪘Percussionist @ Wombatuque
📍Naarm, AU
Martin Potthast @martin-potthast.com Professor at the University of Kassel, https://hessian.AI, and https://ScaDS.AI. Member of @webis.de
Research in information retrieval #IR, natural language processing #NLP, and artificial intelligence.
Ralf Schenkel @ralfschenkel.bsky.social Professor at Trier University, interested in databases, information retrieval, semantic web, bibliographic information systems.
Fernando Diaz @841io.bsky.social Associate Professor, CMU. Researcher, Google. Evaluation and design of information retrieval and recommendation systems, including their societal impacts.
andriy @andriymulyar.bsky.social letting humans touch latent space at nomic
David Graus @graus.nu Assistant Professor in AI (Information Retrieval and NLP) at ILLC, @uva.nl & ICAI @opengov.nl Lab Manager | PhD from @irlab-amsterdam.bsky.social | Treasurer @setuputrecht.bsky.social | Commissie Persoonsgegevens Amsterdam | @aiog.net | @zwaailicht.nl
Aleksandr "Sasha" Petrov @apetrov.bsky.social PhD researcher (Recommender Systems) @TerrierTeam, University of Glasgow.
Ex. Senior Software Engineer @Amazon
The opinions are mine.
merve @merve.bsky.social proud mediterrenean 🧿 open-sourceress at hugging face 🤗 multimodality, zero-shot vision, vision language models, transformers
Glasgow IR Group @irglasgow.bsky.social Glasgow Information Retrieval Group at the University of Glasgow
Yoshitomo Matsubara @yoshitomo-matsubara.net Sr. Research Scientist at Yahoo! / ML OSS developer
PhD in Computer Science at UC Irvine
Research: ML, NLP, Computer Vision, Information Retrieval
EiC: TMLR
Technical Chair: CVPR, ECCV, ICCV, WACV
Open Source/Science matters
https://yoshitomo-matsubara.net
@n0riskn0r3ward.bsky.social @n0riskn0r3ward.bsky.social
Dinos Papakostas @din0s.me 🧠 neural IR 📋 model evals 🏋️ lifting weights
Incredibly optimistic about the future!
𝕏: din0s_ / din0s.me
Eugene Yan @eugeneyan.com RecSys, AI, Engineering; Principal Applied Scientist @ Amazon. Led ML @ Alibaba, Lazada, Healthtech Series A. Writing @ eugeneyan.com, aiteratelabs.com.
Doug Turnbull @softwaredoug.bsky.social Search at Reddit, formerly Shopify and OpenSource Connections. Helped write Relevant Search / AI Powered Search
http://softwaredoug.com
Marius Mosbach @mariusmosbach.bsky.social #NLP Postdoc at Mila - Quebec AI Institute & McGill University
mariusmosbach.com
Siva Reddy @sivareddyg.bsky.social Assistant Professor @Mila-Quebec.bsky.social
Co-Director @McGill-NLP.bsky.social
Researcher @ServiceNow.bsky.social
Alumni: @StanfordNLP.bsky.social, EdinburghNLP
Natural Language Processor #NLProc
Parishad BehnamGhader @parishadbehnam.bsky.social PhD student at McGill University and Mila — Quebec AI Institute
Xing Han Lu @xhluca.bsky.social 👨🍳 Web Agents @mila-quebec.bsky.social
🎒 @mcgill-nlp.bsky.social
Luca Soldaini 🎀 @soldaini.net I like tokens! Leading the Olmo data team at @ai2.bsky.social with @kylelo.bsky.social // all opinions sampled from my own stochastic parrot
more at https://soldaini.net
Alexander Doria @dorialexander.bsky.social LLM for the commons.
Vaibhav @vaibhavadlakha.bsky.social PhD candidate @Mila and @McGill
Interested in interplay of knowledge and language
Love being outdoors!
Sewon Min @sewonm.bsky.social UC Berkeley/BAIR, AI2 || Prev: UWNLP, Meta/FAIR || sewonmin.com
Akari Asai @akariasai.bsky.social Ph.D. student at University of Washington CSE. NLP. IBM Ph.D. fellow (2022-2023). Meta student researcher (2023-) . ☕️ 🐕 🏃♀️🧗♀️🍳
Tom Aarsen @tomaarsen.com Sentence Transformers, SetFit & NLTK maintainer
Machine Learning Engineer at 🤗 Hugging Face
Antoine Chaffin @nohtow.bsky.social 27, French CS Engineer 💻, PhD in ML 🎓🤖 — Guiding generative models for better synthetic data and building multimodal representations @LightOn
benjamin @bclavie.bsky.social doing ML stuff at answer.ai / fast.ai
🇯🇵-based 🇫🇷man
Andrew Drozdov @mrdrozdov.com Research Scientist @ Mosaic x Databricks. Adaptive Methods for Retrieval, Generation, NLP, AI, LLMs https://mrdrozdov.github.io/
Eunsol Choi @eunsol.bsky.social assistant professor in computer science / data science at NYU. studying natural language processing and machine learning.
Orion Weller @orionweller.bsky.social PhD Student at Johns Hopkins University. Previously: Allen Institute for AI, Apple, Samaya AI. Research for #NLProc #IR
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Michael Baym @baym.lol Associate Prof @HarvardMed. Microbial evolution, antibiotic resistance, mobile genetic elements, algorithms, phages, molecular biotech, etc. Find me under “floating dumpster fire”
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Titus Brown @titus.idyll.org I am not a deep man, but I have many shallows. ctbrown@ucdavis.edu, http://ivory.idyll.org/blog/.
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Niema Moshiri @niema.net Associate Teaching Professor of Computer Science at UC San Diego, consulting for PlayStation and Blizzard, Bioinformatician by training, SD-raised. https://niema.net
Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social Assist Dir. @DNALC @CSHL
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health 🧬🦠🔎
Associate Professor of Computer Science, Rice University 🦉💻
Treangen Lab website: www.treangenlab.com
Robert Haase @haesleinhuepf.bsky.social Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine
Nils Homer @nilshomer.com I write software for Biologists. Founder @fulcrumgenomics, Bioinformatician, Computer Scientist, Coder, Father of 2xGirls. Opinions are my own.
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Alicia Oshlack @aliciao.bsky.social Bioinformatics and Computational Biology. Australia
John Didion @jdidion.bsky.social Absolute binf. 🧬/🦀.
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University 🇰🇷 | former Steinegger Lab @ SNU, Söding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
Mikhail Kolmogorov @mishakolmogorov.bsky.social Tenure-track Stadtman Investigator at NIH/NCI. I like computational/cancer/metagenomics. The views are my own.
@luizirber.bsky.social @luizirber.bsky.social
Jeff Gentry @geoffjentry.bsky.social Noted curmudgeon. Software, biotech, food & drink. All opinions my own, no one else wants them anyways.
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Sabrina Nystrom @snystrom.com Data science, genomics, software development. Formerly: Eukaryotic gene regulation, phage, graph genomes. On hiatus building distributed systems.
snystrom.com
Benedict Paten @benedictpaten.bsky.social Professor of Biomolecular Engineering at the University of California, Santa Cruz; Associate Director, UC Santa Cruz Genomics Institute
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:40 | 10k 37:40 | HM 1:27:43 | M 3:39:06
raw9371 @raw937.bsky.social UNC Charlotte Associate Professor in Bioinformatics and Genomics. Computational molecular synthetic virologist.
Github - github.com/raw-lab
Website - rawlab.org
Matt Holt @holtjma.bsky.social Staff scientist at @PacBio; formerly @hudsonalpha; avid gamer; opinions are my own
Daniel Standage @byuhobbes.bsky.social
Tommi Mäklin @themaklin.bsky.social I do statistics, bacterial (meta)genomics and bioinformatics software development.
Tessa Pierce Ward, PhD @bluegenes.bsky.social Genomics/metagenomics, bioinformatics, open science. Asst Researcher @ UC Davis, remote from San Diego. Budding rustacean.
Formerly: @Scripps_Ocean, @Stanford. Nature lover and book fiend. she/her.
Tony Cox @coxtonyj.bsky.social Bioinformatics, string algorithms, DNA sequence analysis. Formerly Solexa/Illumina, bioinformatics consulting at genomerics.com, now quantum error correction at @riverlane.com https://www.linkedin.com/in/coxtonyj/
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Alexis Battle @alexisbattle.bsky.social Professor at Johns Hopkins Biomedical Engineering and CS, Director Malone Center for Engineering in Healthcare, Research Director (Strategy and Partnerships) Data Science and AI Institute
Wei Shen 沈 伟 @shenwei356.bsky.social Associate professor of Bioinformatics at Chongqing Medical University, China. Lab: https://mbio.info- D Daniel Baker @dnbaker.bsky.social Computational genomics, with focus on indexing + search, data re-use, and scalable algorithms.
C++/Rust enthusiast, hardware/algorithms.
Johns Hopkins PhD, prior ARUP Laboratories and PacBio.
Currently building GPU-accelerated platform at Roche.
Fulcrum Genomics @fulcrumgenomics.com We provide specialized bioinformatic services to advance your technology and the understanding of human disease.
https://www.fulcrumgenomics.com
Sean Simmons @seankenneths.bsky.social Computational biologist at the Broad Institute- J John Marshall @johnm.bsky.social Bioinformatics tools developer at Australia’s Centre for Population Genomics. Will edit GA4GH specifications for food. New Zealander fairly recently returned after a decade in the U.K.
Barış Ekim @ekimb.bsky.social 🇹🇷. Postdoc @Yale, formerly @MIT @Broad. Skeets(?) in TR/EN, views my own.
Yoann Dufresne (PhD) @yoann.bsky.social Bioinformatics and Computer Science account of Yoann Dufresne. Researcher & teacher at @univlille.bsky.social.
Alternative controleur game dev account : @collectifartefact.bsky.social
Personal account : @docteursid.bsky.social
James Bonfield @jbonfield.bsky.social Walker, archer, and volunteer woodland warden by weekend, and bioinformatics software engineer and general geek by weekday.
My favourite prime is 15551, my favourite colour is, obviously, octarine, and I love nothing more than being immersed in nature.
Ragnar {Groot Koerkamp} @curiouscoding.nl Postdoc on high troughput bioinformatics @ KIT Karlsruhe;
IMO, ICPC, Xoogler, Rust, road-cycling, hiking, wild camping, photography
Clint Valentine @moonlight.bio Interested in how mutations form in DNA, adventure cycling, bioinformatics, and hand-rolled pasta. Professional crud & stuff wrangler, aspiring artisanal software author. Opinions are my own. Unless they're good; then my employer might want them.
Armin Töpfer @armintoepfer.com Husband. Parent. Dr sc @ETH. Bioinformagician. Father of @PacBio HiFi. C++ Purist. Geek. Digital Artist. Electronic music. Speaks in memes. Opinions are my own!
Mohsen Zakeri @mohsenzakeri.bsky.social Postdoctoral Fellow at Johns Hopkins University, Computational Biology ❤️
www.mohsenzakeri.com
Giulio Ermanno Pibiri @jermp.bsky.social Associate Prof. of CS at Ca' Foscari University of Venice. Indexing, Data Compression, Algorithms.
Ben Raphael @braphael.bsky.social Graduate Class of 1991 Professor of Computer Science, Princeton University
Igor Martayan @imartayan.bsky.social PhD in algorithmic bioinformatics at @bonsaiseqbioinfo.bsky.social.
Interested in space-efficient data structures, sketching algorithms & high-performance computing
https://igor.martayan.org
Seth Stadick @ducktapeprogrammer.bsky.social Bioinformatics. Rust. Mojo.
Yann Ponty @yannponty.bsky.social Bioinformatics researcher (CS PhD) • #RNA enthusiast • AI-skeptic but rational • Employed by #CNRS/#Polytechnique but views mine
Jarno N. Alanko @jnalanko.bsky.social Postdoc in computer science and bioinformatics from Finland. Website: https://jnalanko.net. Various writings in English and Finnish: https://blog.jnalanko.net. Also on Mastodon: https://genomic.social/@jnalanko- D Daniel Liu @daniel-c0deb0t.bsky.social work: anthropic, previously: rust/bioinformatics
Daniel Jones @dcjones.bsky.social Computational biologist at Fred Hutchinson Cancer Center (See my work here: https://dcjones.github.io/). I also post about baking, books, and Seattle politics.
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Fritz Sedlazeck @sedlazeck.bsky.social
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Constantin Ahlmann-Eltze @const-ae.bsky.social Scientist at Isomorphic Labs. Previously at UCL and EMBL working with Wolfgang Huber. Biology, ML, Python, R, cancer immunology
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Sergey Koren @sergek.bsky.social Scientist at NHGRI/NIH. Mapping complete genomes, finished a couple, working on more 🐮🐟🐒. Posts are my own opinion.