easystats @easystats.github.io Official channel of {easystats}, a collection of #rstats 📦s with a unifying and consistent framework for statistical modeling, visualization, and reporting.
“Statistics are like sausages. It’s better not to see them being made, unless you use easystats.”
Surfin' NuRD @surfinnurd.bsky.social Ahh well-a everybody's heard
about the NuRD.
#NuRDistheWord
Cycling/Chromatin Remodelling/Transcription/Enhancers/StemCells
We've got it all.
Living Systems Institute, University of Exeter
https://lsi.exeter.ac.uk/groups/hendrich-group/
Chris Wallace @chr1sw.bsky.social Using statistics and genomics to understand causal mechanisms and potential treatments for chronic immune mediated diseases.
R, emacs, rake.
CITIID and MRC Biostatistics Unit, Cambridge, UK.
https://chr1swallace.gitlab.io
Open Targets @opentargets.org Public-private partnership using human genetics and genomics data for systematic drug target identification and prioritisation. http://blog.opentargets.org
David Ochoa @d0choa.bsky.social Target discovery | Computational Biology | Human Disease Genetics | ML | Cloud computing - @opentargets.org
- @ebi.embl.org
James Briscoe @jamesbriscoe.bsky.social Developmental Biologist working at the Francis Crick Institute. Neural tube, morphogens, and gene regulatory networks. Editor-in-chief, Development.
London · briscoelab.org
Dan Landau @landau.bsky.social Oncologist-scientist at Weill Cornell and New York genome center. Into somatic evolution, trees and words
Jill Moore @moorejille.bsky.social Assistant Prof. @ UMass Chan: studying gene regulation with multi-omic data and comp methods
www.moore-lab.org
Elisa Granato @prokaryota.bsky.social Sci-Comm | Researcher @kurzgesagt.org | she/her 🦠🧫🔬 | Tell your cat I said PSPSPSPS
David Suter @davidsuter.bsky.social PI at EPFL / gene regulation / chromatin / epigenetics / genomics / stem cells / transcription factors / single molecule / protein turnover https://www.epfl.ch/labs/suter-lab/ - and 🎹 https://www.youtube.com/@davidsuter594 / https://soundcloud.com/suterd7
Raquel Fueyo @fueyoraquel.bsky.social Group Leader at Max Planck Institute of Molecular Genetics
https://www.molgen.mpg.de/fueyo-lab
Gene regulation | Transposons | Human embryo development
Chad Weldy, MD, PhD @chadweldy.bsky.social Cardiologist and physician-scientist @Stanford | Assistant Prof of Medicine | working to accelerate precision medicine through epigenetics and RNA editing
https://weldylab.org/
Wayne Maddison @waynemaddison.bsky.social Raw pu-erh in the morning; oolong in the afternoon. Chocolate: dark milk. Would rather be drawing spider genitalia, usually. Looking forward to the next field trip. Thinking about getting a pottery wheel. Father of two amazing adults. Emeritus Prof @ UBC
Tugce Aktas @aktast.bsky.social Max Planck Research Group Leader at MPI for Molecular Genetics, Berlin, Germany. working on:
RNA | Transposable Elements | Genome Evolution
Žiga Avsec @avsecz.bsky.social Genomics initiative lead at @GoogleDeepMind.
Models from our team: Enformer, AlphaMissense, and AlphaGenome.
Axel Visel @axelvisel.bsky.social Genome Scientist. Studies how DNA makes humans, mice, plants, microbes. At Lawrence Berkeley National Lab and Joint Genome Institute. Views are my own.
Mike Robson @drmrobson.bsky.social Group leader of Chromatin (Dys)function lab @MDC-BIMSB
Former Postdoc @Mundlos lab
PhD @ Schirmer lab
https://www.mdc-berlin.de/robson
Daniel Ibrahim @danielibrahim.bsky.social Group Leader @ BIH Berlin and MPI Molecular Genetics. I play around with DNA because I‘d like to know how the genome functions.
Omer Ali Bayraktar @bayraktarlab.bsky.social Group leader
@sangerinstitute.bsky.social Neural diversity, spatial transcriptomics, glia, GBM
Oliver Stegle @oliverstegle.bsky.social Scientist at DKFZ and EMBL in Heidelberg, loving stats, genomics and genetics. @OliverStegle@genomic.social. For group news see @steglelab.bluesky.social
Moritz Mall @moritzmall.bsky.social Research group leader @German Cancer Research Center, reconstructing human development and disease using cell fate engineering
Vitalii Kleshchevnikov, PhD @vitaliikl.bsky.social Researcher @bayraktar_lab @teichlab @steglelab.bsky.social @sangerinstitute.bsky.social | Using models & AI to study cells, cell circuits & brains 🧠 | #SingleCell+spatial | 🌍+🇺🇦
@honicky.bsky.social @honicky.bsky.social
Jackson Hoffman @jxhoffman.bsky.social Scientist in North Carolina studying chromatin remodelers and transcription factors. @fnucleosome.bsky.social coorganizer
ORCID: 0000-0002-6256-144X
Views and posts are all my own
Pierre-Paul Axisa @ppaxisa.bsky.social researcher at CBMR (Copenhagen). Genomics, genetics, compbio, biostats, pun lover.
https://ppaxisa.github.io
Tuuli Lappalainen @tuuliel.bsky.social Professor at KTH, NY Genome Center, SciLifeLab, working on functional genomics and human genetics.
Aylin Nebol @anebol.bsky.social PhD Student @MDC-Berlin | BSc @unibogazici MBG'20
Jeff Vierstra @jeffvierstra.bsky.social Senior Investigator @ Altius Institute for Biomedical Sciences. Research: High-resolution mapping of chromatin structure & function. Fun: Mountain shenanigans and skiing turns all year. Seattle, USA/Patagonia Chilena (🇺🇸🇨🇱). http://vierstra.org
Sahin Naqvi @sahinnaqvi.bsky.social Studying how transcription factor dosage is utilized in development and perturbed in disease. Faculty at Boston Children’s Hospital/Harvard Medical School. naqvilab.org
MDC-BIMSB @mdc-bimsb.bsky.social Berlin Institute for Medical Systems Biology
of the Max Delbrück Center @mdc-berlin.bsky.social
www.mdc-berlin.de/en/bimsb
Chris Ponting @cgatist.bsky.social Disease genomics & molecular mechanisms; ME/cfs: http://decodeme.org.uk, SequenceME @ Edinburgh University. Views - my own. He/him.
Pau Badia i Mompel @paubadiam.bsky.social Postdoctoral researcher at @anshulkundaje.bsky.social Machine learning #ML, gene regulatory networks #GRN, single cell and spatial #omics.
Previously at @saezlab.bsky.social
Core developer of https://decoupler.readthedocs.io/ at @scverse.bsky.social
Alejandro Brenes @ajbrenes.com Wellcome Early Career Fellow @edinuni-irr.bsky.social @edinburgh-uni.bsky.social
| neutrophils single cell proteomics | road cyclist and aero bike enthusiast 🇨🇷🏴
Creator of the Immunological Proteome Resource @immpres.bsky.social
Ying Zhu @nanopots.bsky.social Scientist @Genentech love all small and automated devices, mass spectrometry, protein-protein interactions, cell-cell interactions, and how to make peptides/proteins flying into vacuum; View are my own
Erwin Schoof @erwinschoof.bsky.social Biological Mass Spectrometry enthusiast, trying to make sense of cellular hierarchies and heterogeneity
Pierre Sabatier @pierresabatier.bsky.social Postdoc at Uppsala University applying proteomics and single-cell analysis to stem cell and donor-derived models in diabetes.
Christopher Rose @cmichaelrose.bsky.social Director of Discovery Proteomics & Group Leader @Genentech. Passion for developing proteomics technologies that fuel therapeutic discovery. Posts are mine.
Nikolai Slavov @slavov-n.bsky.social Mentor, scientist & engineer. Having fun in @slavovlab.bsky.social and Parallel Squared Technology Institute @parallelsq.bsky.social with biology & single-cell proteomics.
https://nikolai.slavovlab.net
Harrison Specht @harrisons.bsky.social Exploring biology with mass spectrometry
Jesper V. Olsen @jespervolsen.bsky.social MS-based proteomics at University of Copenhagen
JesperOlsenLab @jesperolsenlab.bsky.social Mass spectrometry for quantitative proteomics. The Olsen group at the Center for Protein Research, University of Copenhagen.
Jarrod Sandow @jsandow.bsky.social Chief Product Officer at IonOpticks | Separator of peptides and proteoforms | Proteomics
Pedro Aragon @pedroaragon.bsky.social Interested in anything sensitive to mass - mostly bikes and mass spectrometers
Manuel Matzinger @matzingerm.bsky.social Analytical biochemist dedicated to proteomic method development
Philipp Lange (he/him) @philipplange.bsky.social Translational #Proteomics & #Bioinformatics #ChildhoodCancer @UBC
Mechanistic role and #PrecisionMedicine of #PTM & #oncoproteoforms. #SingleCellProteomics, #ML & #LLM
Retweet ≠ endorsement
langelab.med.ubc.ca
Helena Lucia Crowell @helucro.bsky.social Greek/American/German-ish in Spain.
Now PD in Barcelona. Prev PhD in Zurich.
community > monopolies. passion > prestige. creativity > recipes. analog > digital. music > all.
Anna Esteve Codina @annaesteveco.bsky.social Functional Genomics Team Leader @CNAG 🧬💻🔎 omics, rare diseases, single-cell, long-reads, transposons.
Tomàs Montserrat Ayuso @tmontsay.bsky.social 💻 PhD Student @ Functional Genomics Team, CNAG
🎓 Associate Lecturer in Bioinformatics @ UVic-UCC
📚 Author of biologydatascience.com
🔬 Exploring genomics, data science, and the frontiers of biology
Wei-Lin Qiu @613weilin.bsky.social Postdoctoral Researcher in Robin Andersson lab at University of Copenhagen
Christian Nefzger @nefzgerlab.bsky.social Cell identity/Transcription factors/Aging/Maturation - Group Leader/PI at the IMB, University of Queensland, Brisbane, Australia
Konrad @konradjk.bsky.social Genomicist, computational biologist. Assistant professor @ MGH, HMS. Associate member @ Broad Institute
https://klab.is
Muzz Haniffa @mhaniffa.bsky.social Clinician scientist, passionate about #immunology, #genomics, #single-cell and #spatial omics, #development #organoid #dermatology. Mother, food enthusiast and film buff
Elisabetta Mereu @elimereu.bsky.social Group leader at the Josep Carreras Leukemia Research Institute. Passionate of single-cell genomics and ML! Advancing personalized therapies for cancer and beyond. #singlecellgenomics #Immunotherapy
Marco Varrone @marcovarrone.bsky.social Postdoc in Computational Biology at @CirielloLab @dbc_unil.
Machine Learning for spatial omics.
https://batcheffect.com
Valentina Boeva @valboeva.bsky.social Computational Cancer Genomics Group
Bart Deplancke @bartdeplancke.bsky.social Professor in Systems Biology & Genetics @EPFL, opinions my own; Single Cell Omics / Gene Regulation / Transcription Factor / Stem Cells / Regulatory Variation / ML / Imaging / Adipose Biology / Microfluidics
https://www.epfl.ch/labs/deplanckelab
Babak Alipanahi @babaka.bsky.social computational biology, artificial intelligence and large-scale datasets to improve human health
Magnus Rattray @mrattray.bsky.social Professor of Computational & Systems Biology at University of Manchester. Applies machine learning and modelling to help understand the complexity of biology. idsai.manchester.ac.uk, https://www.ellismcr.org, @official-uom.bsky.social
Marianna Rapsomaniki @marianna-raps.bsky.social Assistant Professor at the Biomedical Data Science Center at University of Lausanne (UNIL) and Lausanne University Hospital (CHUV). AI/ML for single-cell and spatial biology with a focus on oncology.
Steve Turner @sjturn.bsky.social Immunologist @MonashUni, Head of Dept Microbiology, Past President of @ASImmunology; Trying to work out how immunity works, in particular T cells #Tcellsarecool #immunosky
Kasper D Hansen @kasperdhansen.bsky.social Professor @ JHU, statistical genomics, www.hansenlab.org
Nicolas Robine 🇪🇺🇫🇷🇺🇸 @nicorobine.bsky.social Artisanal Genomics since 2002. Mostly in English, sometimes in French. #NoPasaran
Jieran Sun @onesinglecell.bsky.social I treat every #singleCell gently. | PhD in Comp Bio at Lausanne University Hospital. #OpenScience #SpatialTranscriptomics
Estella Yixing Dong @estellayixingdong.bsky.social Applied Machine Learning @Bayer | PhD @CHUVLausanne | Immunotherapy, Single-Cell RNAseq, Spatial Transcriptomics, Statistics and Machine Learning. 📷⛸️🏔️
Jesse Engreitz @jengreitz.bsky.social Assistant Professor @ Stanford Genetics & BASE Initiative. Mapping the regulatory code of the human genome to understand heart development and disease. www.engreitzlab.org
oZgun Gokce @gokcegroup.bsky.social Neuroscience Professor at UKBonn&DZNE Bonn. Bridging the gap between brain and immunity with genomics 🏳️🌈🏴☠️🇨🇳🇹🇷🇫🇷🇳🇪🇩🇪
https://gokcelab.org ORCID 0000-0001-6319-404X
Julio Saez-Rodriguez @juliosaezrod.bsky.social Computational Biologist, Head of research @ebi.embl.org, part-time
Heidelberg University, codirector DREAM challenges. For group's activities, see @saezlab.bsky.social
Mark Sanborn @sanbomics.bsky.social
Robin Andersson @randersson.bsky.social Associate Professor at University of Copenhagen. Computational genomicist interested in gene regulation. @robin_andersson on X
https://anderssonlab.org
Matthew Bernstein @matthew-bernstein.bsky.social Principal Scientist @ Somite AI | Computational biology and biomedical data science | Boston, MA | https://mbernste.github.io
Matt Ritchie @mritchieau.bsky.social Lab Head in #bioinformatics developing #opensource #rstats #bioconductor packages for #singlecell #nanopore #rnaseq analysis, Melbourne, AU
Software & data: https://mritchielab.github.io
LinkedIn: https://www.linkedin.com/in/matthew-ritchie-5a468880
Bioconductor @bioconductor.bsky.social Bioconductor: Free, open-source software for rigorous, reproducible biological data analysis with R. Join our diverse community of developers and data scientists.
https://bioconductor.org/
John Quackenbush @johnquackenbush.bsky.social Father, husband, scientist, professor, martial artist, scuba diver (in about that order).
Elana Fertig, PhD @fertiglab.bsky.social Inter-dimensional cancer biologist. Director of the @genomescience.bsky.social at @umbaltimore.bsky.social.
Björn Usadel @usadellab.bsky.social Plant Omics, Machine Learning, Genomics, Tools, Data Managment
Labs in Forschungszentrum Jülich and HHU Düsseldorf Uni
https://www.fz-juelich.de/en/ibg/ibg-4
https://www.biological-data-science.hhu.de/en/biological-data-science
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup
Luca Marconato @lucamarconato.bsky.social
Mikaela Koutrouli @mkoutrouli.bsky.social Computing all things single-cell | Postdoc at Genentech @MarioniLab | Steering council at scverse.org
Can Ergen @canergen.bsky.social single-cell genomics, spatial transcriptomics, T cell immunology, IBD
Lukas Heumos @lukasheumos.bsky.social Sr Solution Architect Genomics @NVIDIA | Co-founder @scverse | Postdoc at @theislab
Views and opinions expressed on this account are those of my own and do not represent those of my employer, NVIDIA.
Emma Dann @emmamarydann.bsky.social Postdoc fellow @ Stanford & Gladstone Institutes
Core team @scverse-team.bsky.social
Bringing the single-cell genomics in human complex trait genetics
https://emdann.github.io/
scverse @scverse.bsky.social Foundational tools for omics data (mostly in python).
Dane Vassiliadis @danevass.bsky.social chromatin, transcription, lineage tracing & single cells
Sten Linnarsson @sten.linnarsson.org Professor of molecular systems biology at Karolinska Institutet, Sweden. On a mission to delete brain cancer using DNA therapy. Email: sten.linnarsson@ki.se
Rachel Queen @rachelq-ncl.bsky.social Neurodivergent NUAcT fellow, Newcastle University. Bioinformatics, genomics, human development (esp eye and heart) single-cell, spatial transcriptomics. Additional posts about dogs, music and neurodiversity likely.
Shila Ghazanfar @shazanfar.bsky.social
Dominic Grün @dominicgrun.bsky.social Quantitative Single-Cell Biology
Prof at Würzburg Institute of Systems Immunology (WüSI)
Luciano Martelotto @lgmartelotto.bsky.social Sc/St-Omics pro-aficionado. Knowledge sharing is my thing. Views, opinions and comments are my own and do not represent those of my employer. Like/Share ≠ endorse
Favorite quote: “Be curious, not judgmental”
Fabian Theis @fabiantheis.bsky.social Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Ankur Sharma @ankuroncofetal.bsky.social Laboratory Head Garvan Institute | CSL Centenary Fellow | OncoFetal Ecosystem | #SingleCell #SpatialTranscriptomics #LiverCancer #Immunotherapy #Vaccines
Valentine Svensson @nxn.se Molecular cell biology and stats / ML, mostly scRNA-seq.
Principal Scientist at Tahoe Tx.
https://www.nxn.se/archive
Caleb Lareau @caleblareau.bsky.social assistant professor @mskcancercenter.bsky.social
clareaulab.com
Gregor Sturm @grst.bsky.social Single Cell/Spatial. Cancer Immunology. Outdoor activities.
Core developer @scverse.bsky.social.
Working in Clinical Bioinformatics at Boehringer Ingelheim.
Formerly PhD student at Medical University of Innsbruck.
My private account.
github.com/grst
Federico Marini @federicomarini.bsky.social Head of the Bioinformatics Group at the Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI) @UnimedizinMainz
🇮🇹 in 🇩🇪, father of three, loves 💻🧬🩸☀️🍹🌲🏖️ and saying "it depends". He/him
https://federicomarini.github.io
Christoph Bock Lab @ CeMM & MedUni Vienna @bocklab.bsky.social Technology-driven biomedical research at CeMM Research Center for Molecular Medicine & MedUni Vienna #cancer #immunology #bioinformatics #AI #singlecell #CRISPR
Mark Robinson @markrobinsonca.bsky.social statistical bioinformatics; canadian / swiss; #methodsmatter #rstats; open science advocate; grumpy towards prestige worshippers, excessive admin and bros; will sacrifice sleep for a sunrise.
https://robinsonlabuzh.github.io/
Saez-Rodriguez Group @saezlab.bsky.social Account of the Saez-Rodriguez lab at EMBL-EBI and Heidelberg University. We integrate #omics data with mechanistic molecular knowledge into #opensource #ML methods
Website: https://saezlab.org/
GitHub: https://github.com/saezlab/
Rong Fan @rongfan8.bsky.social
Erik van Nimwegen @erikvannimwegen.bsky.social Gene regulatory networks and genome evolution. How do single cells make up their minds?
@NimwegenLab@mstdn.science
@NimwegenLab on twitter. Sorry X.
Santiago Carmona 🧬 🖥️ 🧑🏾🔬 @carmonation.bsky.social Computational biologist, associate professor at University of Geneva, Department of Pathology and Immunology. Single-cell omics, bio data science, immunology & cancer research