Shawn Gallagher @spgyeahyouknowme.bsky.social Forensic scientist. History lover.
Shyamal Mehtalia @shyamalmehtalia.bsky.social Accelerating informatics and data analysis at Illumina. Posts and opinions are my own!
PLOS Biology @plosbiology.org A leading life science journal that champions inclusive, high-impact research across all disciplines—from molecules to ecosystems. We offer innovative formats and collaborative editorial support to ensure your work achieves its full scientific impact.- C Christine A @christineanya.bsky.social Is the future here yet?
Matthew Feickert @matthewfeickert.com Research scientist at UW-Madison data science institute working on #LHC #physics and data science with the ATLAS experiment @ CERN and IRIS-HEP. PhD @ SMU
Nextflow @nextflow.io The leading open source orchestrator for containerized, data-intensive pipelines on any infrastructure at any scale. From @seqera.io
MultiQC @multiqc.info Open-source tool to simplify and streamline quality control analysis, from @seqera.io
Seqera @seqera.io The Intelligent Engine for Life Sciences. From the Creators of @nextflow.io and @multiqc.info
Harshil Patel @drhpatel.bsky.social Professional pipeline stitcher, nf-core dabbler here and there, Director of Scientific Development @Seqera
.
Paolo Di Tommaso @paoloditommaso.bsky.social
Rob Lalonde @rlalonde.bsky.social Chief of Commercial Partnerships @Seqera.io
Doing cool @nextflowio infrastructure stuff in #bioinformatics and helping startups with going to market. Tweets are my own.
Ken Brewer @kenibrewer.bsky.social Open-source x Science - Dev Advocate @ Seqera
Bioimaging enthusiast
Marcel Ribeiro-Dantas, Ph.D. @mribeirodantas.bsky.social 👨💻 @Nextflow.io and @nf-co.re Senior Developer Advocate at @Seqera.io 🇪🇸
👨🔬 Former Institut Curie & @Sorbonne-universite.fr 🇫🇷
👨🎓 Former LAIS / HUOL & BioME - UFRN 🇧🇷.
Open Science Software Foundation @openscience.software A non-profit foundation dedicated to supporting open source scientific tools and promoting free access to resources for the global scientific community.
Chris Hakkaart @chrishakk.bsky.social 👨🔬 Scientist | 👨💻 Bioinformatician | ✏️ Technical Writer for Seqera
Luke Pembleton @lwpembleton.bsky.social Genomic Breeding Scientist 👨💻🧬 | Global Strategic Science Manager – #F0D600 Seed Company | #NextflowAmbassador | Timezone variable 🕒🌏 | Dad | Views my own. 🦘
🌐🔗 https://lpembleton.rbind.io
Nicolas Robine 🇪🇺🇫🇷🇺🇸 @nicorobine.bsky.social Artisanal Genomics since 2002. Mostly in English, sometimes in French. #NoPasaran
Michael Guertin @guertin.bsky.social Professor of Molecular Biology and Genomics at UConn Health. The lab studies gene regulation, focusing on transcription factors
Andrew Page @andrewjpage.bsky.social Microbial Bioinformatics scientist. Host the MicroBinfie and The Bioinformatics Lab Podcasts. CTO at Origin Sciences
Devon Ryan @dpryan79.bsky.social An American in Germany, an ion channel guy in bioinformatics, a proponent of scientific skepticism in an irrational world.
@devon@genomic.social, @dpryan79 on twitter and github
Sasha Gusev @sashagusevposts.bsky.social Statistical geneticist. Associate Prof at Dana-Farber / Harvard Medical School.
www.gusevlab.org
Elinne Becket, PhD @bielleogy.bsky.social Assoc Prof @CSUSM | 🦠⇄🦠 MGEs & coastal metagenomes | #BlueSoup 🥣🧬 🧫 | R1→Biotech→PUI | Protective mama bear of students | She/Her
Kieran Campbell @kieranrcampbell.bsky.social https://www.camlab.ca | ML for cancer genomics + single-cell and spatial computational methods | Toronto Canada 🖥️🧬
Maxime U Garcia @maxulysse.github.io Bioinfomagician/PhD in Bioinformatics, developing @nextflow.io @nf-co.re pipelines
Posts and RPs in English/French - He/him
Florian Wünnemann @flowuenne.bsky.social Bioinformatics engineer at Seqera (seqera.io)
Genomics 🧬 | Spatial omics🔬 | technology 💻 | soccer ⚽
Working towards scalable and reproducible science with #Nextflow
Living in Montreal 🇨🇦
Alex Peltzer @alexpeltzer.bsky.social Clinical Bioinformatics @boehringer with interests in NGS, cloud, @nf_core , cancer & immunology. Tweets are my own. @alex_peltzer@genomic.social
Alexander Titus @alexandertitus.com Scientist, Sci-Fi Author, and Tech Nerd wandering the world. Obsessed with #biotech, #AI, and frontier tech.
Join me @ connectedideasproject.com for thoughts on tech, policy, and life.
ProfColinBean @profcolinbean.bsky.social Freshwater fish biologist - big on rare species, their ecology and conservation. Also known to dabble in non-native species issues. Personal account and all views are entirely my own. Leantóir Celtic FC 🍀
Teif lab @teiflab.bsky.social Teif lab at the University of Essex. We work on gene regulation in chromatin and applications to liquid biopsies, using approaches of genomics, biophysics, bioinformatics & AI. Our focus is nucleosomics, TF binding, CTCF, cfDNA. https://generegulation.org
zach cp @zcpbx.bsky.social Biochem, microbio, and protein science. Learning Rust for machine learning.
Anthony Mathelier @amathelier.bsky.social Computational biologist interested in gene expression regulation.
Associate Director and Group Leader at Norwegian Centre for Molecular Biosciences and Medicine, University of Oslo, Nordic EMBL Partnership for Molecular Medicine.
https://mathelierlab.com
Eric Kernfeld @ekernf01.bsky.social Statistician and computational biologist; uw alum; jhu student. He/him. http://ekernf01.github.io
Nicky Whiffin @nickywhiffin.bsky.social Associate Professor @ Big Data Institute, University of Oxford
2024 Lister Institute Fellow
genomics | rare disease | gene regulation | genetic therapies
https://rarediseasegenomics.org/
(field) hockey player | cyclist | hiker
Sebastian Schönherr @sebschoenherr.bsky.social computational genomics prof at med uni innsbruck. co-created the michigan imputation server. co-created two kids ❤️.
interested in AI, genomics, chronic diseases, nextflow, complex gene regions
https://genepi.i-med.ac.at/team/schoenherr-sebastian
Lukas Forer @lukfor.bsky.social Assistant Professor of Genome Informatics. MedUni Innsbruck. Cloud Computing, Machine Learning, AI, Genotype Imputation. Open Source and Open Science. Co-Creator of Michigan Imputation Server and www.askimed.com. Creator of www.nf-test.com.
Damien C-C @dccc-phd.bsky.social Human geneticist 🧬, bioinformagician 🧙🏻♂️, choral musician 🎼, and unrepentant city slicker 🏙️. Amplifying interesting signals (like #ScienceWin)! [he/him]
https://orcid.org/0000-0003-3466-1846
Michael Baym @baym.lol Associate Prof @HarvardMed. Microbial evolution, antibiotic resistance, mobile genetic elements, algorithms, phages, molecular biotech, etc. Find me under “floating dumpster fire”
Zamin Iqbal @zaminiqbal.bsky.social Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility. https://zam-iqbal-lab.org/
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Niema Moshiri @niema.net Associate Teaching Professor of Computer Science at UC San Diego, consulting for PlayStation and Blizzard, Bioinformatician by training, SD-raised. https://niema.net
Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social Assist Dir. @DNALC @CSHL
Robert Haase @haesleinhuepf.bsky.social Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University 🇰🇷 | former Steinegger Lab @ SNU, Söding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
@luizirber.bsky.social @luizirber.bsky.social
Jeff Gentry @geoffjentry.bsky.social Noted curmudgeon. Software, biotech, food & drink. All opinions my own, no one else wants them anyways.
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Sabrina Nystrom @snystrom.com Data science, genomics, software development. Formerly: Eukaryotic gene regulation, phage, graph genomes. On hiatus building distributed systems.
snystrom.com
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:40 | 10k 37:40 | HM 1:27:43 | M 3:39:06
raw9371 @raw937.bsky.social UNC Charlotte Associate Professor in Bioinformatics and Genomics. Computational molecular synthetic virologist.
Github - github.com/raw-lab
Website - rawlab.org
Daniel Standage @byuhobbes.bsky.social
Tommi Mäklin @themaklin.bsky.social I do statistics, bacterial (meta)genomics and bioinformatics software development.
Tessa Pierce Ward, PhD @bluegenes.bsky.social Genomics/metagenomics, bioinformatics, open science. Asst Researcher @ UC Davis, remote from San Diego. Budding rustacean.
Formerly: @Scripps_Ocean, @Stanford. Nature lover and book fiend. she/her.
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Wei Shen 沈 伟 @shenwei356.bsky.social Associate professor of Bioinformatics at Chongqing Medical University, China. Lab: https://mbio.info
Sean Simmons @seankenneths.bsky.social Computational biologist at the Broad Institute
Barış Ekim @ekimb.bsky.social 🇹🇷. Postdoc @Yale, formerly @MIT @Broad. Skeets(?) in TR/EN, views my own.
Yoann Dufresne (PhD) @yoann.bsky.social Bioinformatics and Computer Science account of Yoann Dufresne. Researcher & teacher at @univlille.bsky.social.
Alternative controleur game dev account : @collectifartefact.bsky.social
Personal account : @docteursid.bsky.social
James Bonfield @jbonfield.bsky.social Walker, archer, and volunteer woodland warden by weekend, and bioinformatics software engineer and general geek by weekday.
My favourite prime is 15551, my favourite colour is, obviously, octarine, and I love nothing more than being immersed in nature.
Ragnar {Groot Koerkamp} @curiouscoding.nl Postdoc on high troughput bioinformatics @ KIT Karlsruhe;
IMO, ICPC, Xoogler, Rust, road-cycling, hiking, wild camping, photography
Clint Valentine @moonlight.bio Interested in how mutations form in DNA, adventure cycling, bioinformatics, and hand-rolled pasta. Professional crud & stuff wrangler, aspiring artisanal software author. Opinions are my own. Unless they're good; then my employer might want them.
Mohsen Zakeri @mohsenzakeri.bsky.social Postdoctoral Fellow at Johns Hopkins University, Computational Biology ❤️
www.mohsenzakeri.com
Giulio Ermanno Pibiri @jermp.bsky.social Associate Prof. of CS at Ca' Foscari University of Venice. Indexing, Data Compression, Algorithms.
Ben Raphael @braphael.bsky.social Graduate Class of 1991 Professor of Computer Science, Princeton University
Igor Martayan @imartayan.bsky.social PhD in algorithmic bioinformatics at @bonsaiseqbioinfo.bsky.social.
Interested in space-efficient data structures, sketching algorithms & high-performance computing
https://igor.martayan.org
Seth Stadick @ducktapeprogrammer.bsky.social Bioinformatics. Rust. Mojo.
Yann Ponty @yannponty.bsky.social Bioinformatics researcher (CS PhD) • #RNA enthusiast • AI-skeptic but rational • Employed by #CNRS/#Polytechnique but views mine
Jarno N. Alanko @jnalanko.bsky.social Postdoc in computer science and bioinformatics from Finland. Website: https://jnalanko.net. Various writings in English and Finnish: https://blog.jnalanko.net. Also on Mastodon: https://genomic.social/@jnalanko- D Daniel Liu @daniel-c0deb0t.bsky.social work: anthropic, previously: rust/bioinformatics
Daniel Jones @dcjones.bsky.social Computational biologist at Fred Hutchinson Cancer Center (See my work here: https://dcjones.github.io/). I also post about baking, books, and Seattle politics.
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Constantin Ahlmann-Eltze @const-ae.bsky.social Scientist at Isomorphic Labs. Previously at UCL and EMBL working with Wolfgang Huber. Biology, ML, Python, R, cancer immunology
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Lukas Weber @lmweber.bsky.social Assistant Professor of Biostatistics, Boston University. Statistical genomics, genomic data science, open science, R programming https://lmweber.org/
Davis McCarthy @davisjmcc.bsky.social Head, Bioinformatics and Cellular Genomics Lab,
St Vincent's Institute of Medical Research, Melbourne. Stats, AI/ML, bioinformatics, genomics, single-cell.
https://www.svi.edu.au/researchers/dr-davis-mccarthy/
Ragothaman Yennamalli @structbioinfo.bsky.social Associate Professor JNU | Computational Biologist | YIM2024 organizer | Editor: CSBJ, BMC Bioinfo | Spl issue Ed: Biophys J | He/Him.
Sergey Nurk @sergeynurk.bsky.social Principal Bionformatician
@nanopore. Ex: Postdoctoral fellow @ NIH; Researcher @ CAB. Views are my own; #StandWithUkraine Support Ukraine!
Fereydoun Hormozdiari @fhormozd.bsky.social Associate Professor @ UC-Davis | Former Senior Director @ Exai Bio | Computational Biology, ML/AI, Genomics, RNA, Cancer
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup
Johannes Köster @johanneskoester.bsky.social Professor for Bioinformatics and Computational Oncology
University of Duisburg-Essen
Author of Snakemake, founder of Bioconda
Mervin Fansler @mfansler.bsky.social Postdoc in Cvejic Group, BRIC, Københavns Universitet. PhD from Mayr Lab at Sloan Kettering Institute. Reproducible research enthusiast. Conda Forge R Team. Creator of scUTRquant.
Alex Dobin @alexdobin.com Dad, Homelab, Engineering Manager @ Microsoft
Samuel Lampa @smllmp.bsky.social Fascinated by Living Systems | Clin Micro Bioinfo @ Karolinska | PhD http://pharmb.io | Reproducibility, #SciWorkflows | Curious: Genomic Algos, TEs
R&D: livingsystems.cc
Thinking: livingsystems.substack.com
Married. Dad. Sinner saved by grace.
Ben Kaminow @bkaminow.bsky.social PhD student working at the intersection of ML and drug discovery in the Chodera Lab
Timothy Stiles @stiles.io Genetic, research, and software engineer looking to make friends.
Creator of Poly, an open source Go package for engineering DNA 🧬
Let's engineer weird little guys together.
github.com/bebop/poly
📍San Francisco
Robert Aboukhalil @robert.bio Co-founder at https://omgenomics.com. Creator of https://42basepairs.com, https://sandbox.bio, https://biowasm.com, https://levelupwasm.com. Bioinformatics, genomics.
About me: https://robert.bio
Anna Poetsch @apoetsch.bsky.social Computational Biologist at TU Dresden. Interested in how genomes encode their own stability.
Nathan Roach @natproach.bsky.social Bad opinion haver, leftist, scientist, bioinformatics PhD, Rust lang enthusiast, Python begrudging-acceptor, in that order.
Francesca Finotello 🖥️🧬 @francescafinotello.bsky.social Assistant Professor leading the Computational Biomedicine Group at the University of Innsbruck • Data scientist at the Digital Science Center (DiSC) • Precision medicine and cancer immunotherapy • Mother 🧬🖥️
https://computationalbiomedicinegroup.github.io/
Deniz Gökbuget @denizgoekbuget.bsky.social Principal Scientist @Genentech | Translational research & biomarker development in prostate cancer. Passionate about bridging science and patient impact.
Marta Melé @martamele.bsky.social computational biologist and Group Leader of the Trascriptomics and Functional Genomics Lab at the Barcelona Supercomputing Center
Pierre Peterlongo @pierrepeterlongo.bsky.social Inria Senior researcher.
Head of the https://team.inria.fr/genscale/ at Inria and Irisa.
Algorithmics for sequencing data analyses, genomics and metagenomics.
Rayan Chikhi @rayanchikhi.bsky.social
Jeremy Leipzig @leipzig.bsky.social Bioinformatics engr & pop gen product mgmt. O'author, PhD, 4x startup survivor. Pipelines, metadata, genomics, reproducible research. Views my own.