Alfonso Martinez Arias @amartinezarias.bsky.social Interested in how cells use genes to create shape, form and function in #embryos as well as in Societal Wellbeing
#NotInTheGenes #InNumbersWeTrust #gastruloids #gastrulation
Rob Patro @robp.bsky.social Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own. Tech stack: https://github.com/rob-p/tech-stack.
Michael Hoffman @michaelhoffman.bsky.social Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
Michael Baym @baym.lol Associate Prof @HarvardMed. Microbial evolution, antibiotic resistance, mobile genetic elements, algorithms, phages, molecular biotech, etc. Find me under “floating dumpster fire”
Adam Phillippy @aphillippy.bsky.social Finished a human genome @ NHGRI, working on a few hundred more @ Johns Hopkins University 👨💻
Lab: https://genomeinformatics.github.io
Titus Brown @titus.idyll.org I am not a deep man, but I have many shallows. ctbrown@ucdavis.edu, http://ivory.idyll.org/blog/.
Tim Triche, Jr.🔰 @timtriche.bsky.social Executive panhandler, trichelab.vai.org
Posts may contain trace quantities of blood🩸, chromatin 🧬 & stats 🧮
https://scholar.google.com/citations?user=AOoIO74AAAAJ
Views expressed are my own (but for the right price they can be yours!)
Mike Schatz @mikeschatz.bsky.social Bloomberg Distinguished Professor at Johns Hopkins University. http://schatz-lab.org
Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social Developing data intensive computational methods • PI @ Seoul National University 🇰🇷 • #FirstGen • he/him • Hauptschüler
Ben Langmead @benlangmead.bsky.social Professor of Computer Science @ JHU. https://www.langmead-lab.org/ https://www.youtube.com/BenLangmead
Niema Moshiri @niema.net Associate Teaching Professor of Computer Science at UC San Diego, consulting for PlayStation and Blizzard, Bioinformatician by training, SD-raised. https://niema.net
Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social Assist Dir. @DNALC @CSHL
Todd J. Treangen @treangen.bsky.social Computational tools for microbial genomics, metagenomics, & public health 🧬🦠🔎
Associate Professor of Computer Science, Rice University 🦉💻
Treangen Lab website: www.treangenlab.com
Robert Haase @haesleinhuepf.bsky.social Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine
Nils Homer @nilshomer.com I write software for Biologists. Founder @fulcrumgenomics, Bioinformatician, Computer Scientist, Coder, Father of 2xGirls. Opinions are my own.
Erik Garrison @thinks.lol computational biologist: genomes, evolution, DNA
Alicia Oshlack @aliciao.bsky.social Bioinformatics and Computational Biology. Australia 
John Didion @jdidion.bsky.social Absolute binf. 🧬/🦀.
Milot Mirdita @milot.bsky.social Open source #bioinformatics at Sungkyunkwan University 🇰🇷 | former Steinegger Lab @ SNU, Söding Lab @ MPI-NAT | http://mstdn.science/@milotmirdita
Mikhail Kolmogorov @mishakolmogorov.bsky.social Tenure-track Stadtman Investigator at NIH/NCI. I like computational/cancer/metagenomics. The views are my own.
@luizirber.bsky.social @luizirber.bsky.social 
Jeff Gentry @geoffjentry.bsky.social Noted curmudgeon. Software, biotech, food & drink. All opinions my own, no one else wants them anyways.
Camille Marchet ⚡ @camillemrcht.bsky.social Researcher in @BonsaiSeqBioinfo
Lille, France. Bioinformatics, data-structures & DNA/RNA.
Jim Shaw @jimshaw.bsky.social Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT.
I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics.
https://jim-shaw-bluenote.github.io
Sabrina Nystrom @snystrom.com Data science, genomics, software development. Formerly: Eukaryotic gene regulation, phage, graph genomes. On hiatus building distributed systems.
snystrom.com
Benedict Paten @benedictpaten.bsky.social Professor of Biomolecular Engineering at the University of California, Santa Cruz; Associate Director, UC Santa Cruz Genomics Institute
Kristoffer Sahlin @ksahlin.bsky.social Associate Professor at the Department of Mathematics, Stockholm University, and a Scilifelab Fellow. Algorithms, Modeling, Transcriptomics, Genomics.
Hobby runner 5000m 18:40 | 10k 37:40 | HM 1:27:43 | M 3:39:06
Matt Holt @holtjma.bsky.social Staff scientist at @PacBio; formerly @hudsonalpha; avid gamer; opinions are my own
Daniel Standage @byuhobbes.bsky.social 
Tessa Pierce Ward, PhD @bluegenes.bsky.social Genomics/metagenomics, bioinformatics, open science. Asst Researcher @ UC Davis, remote from San Diego. Budding rustacean.
Formerly: @Scripps_Ocean, @Stanford. Nature lover and book fiend. she/her.
Tony Cox @coxtonyj.bsky.social Bioinformatics, string algorithms, DNA sequence analysis. Formerly Solexa/Illumina, bioinformatics consulting at genomerics.com, now quantum error correction at @riverlane.com https://www.linkedin.com/in/coxtonyj/
Ilia Minkin @minkinpark.bsky.social Research Associate @ UConn | Algorithms, Genomics, Python, C++
Alexis Battle @alexisbattle.bsky.social Professor at Johns Hopkins Biomedical Engineering and CS, Director Malone Center for Engineering in Healthcare, Research Director (Strategy and Partnerships) Data Science and AI Institute
Wei Shen 沈 伟 @shenwei356.bsky.social Associate professor of Bioinformatics at Chongqing Medical University, China. Lab: https://mbio.info- D Daniel Baker @dnbaker.bsky.social Computational genomics, with focus on indexing + search, data re-use, and scalable algorithms.
C++/Rust enthusiast, hardware/algorithms.
Johns Hopkins PhD, prior ARUP Laboratories and PacBio.
Currently building GPU-accelerated platform at Roche.
Fulcrum Genomics @fulcrumgenomics.com We provide specialized bioinformatic services to advance your technology and the understanding of human disease.
https://www.fulcrumgenomics.com
Sean Simmons @seankenneths.bsky.social Computational biologist at the Broad Institute- J John Marshall @johnm.bsky.social Bioinformatics tools developer at Australia’s Centre for Population Genomics. Will edit GA4GH specifications for food. New Zealander fairly recently returned after a decade in the U.K.
Barış Ekim @ekimb.bsky.social 🇹🇷. Postdoc @Yale, formerly @MIT @Broad. Skeets(?) in TR/EN, views my own.
Yoann Dufresne (PhD) @yoann.bsky.social Bioinformatics and Computer Science account of Yoann Dufresne. Researcher & teacher at @univlille.bsky.social.
Alternative controleur game dev account : @collectifartefact.bsky.social
Personal account : @docteursid.bsky.social
James Bonfield @jbonfield.bsky.social Walker, archer, and volunteer woodland warden by weekend, and bioinformatics software engineer and general geek by weekday.
My favourite prime is 15551, my favourite colour is, obviously, octarine, and I love nothing more than being immersed in nature.
Ragnar {Groot Koerkamp} @curiouscoding.nl Postdoc on high troughput bioinformatics @ KIT Karlsruhe;
IMO, ICPC, Xoogler, Rust, road-cycling, hiking, wild camping, photography
Clint Valentine @moonlight.bio Interested in how mutations form in DNA, adventure cycling, bioinformatics, and hand-rolled pasta. Professional crud & stuff wrangler, aspiring artisanal software author. Opinions are my own. Unless they're good; then my employer might want them.
Armin Töpfer @armintoepfer.com Husband. Parent. Dr sc @ETH. Bioinformagician. Father of @PacBio HiFi. C++ Purist. Geek. Digital Artist. Electronic music. Speaks in memes. Opinions are my own!
Mohsen Zakeri @mohsenzakeri.bsky.social Postdoctoral Fellow at Johns Hopkins University, Computational Biology ❤️
www.mohsenzakeri.com
Giulio Ermanno Pibiri @jermp.bsky.social Associate Prof. of CS at Ca' Foscari University of Venice. Indexing, Data Compression, Algorithms.
Ben Raphael @braphael.bsky.social Graduate Class of 1991 Professor of Computer Science, Princeton University
Igor Martayan @imartayan.bsky.social PhD in algorithmic bioinformatics at @bonsaiseqbioinfo.bsky.social.
Interested in space-efficient data structures, sketching algorithms & high-performance computing
https://igor.martayan.org
Seth Stadick @ducktapeprogrammer.bsky.social Bioinformatics. Rust. Mojo.
Yann Ponty @yannponty.bsky.social Bioinformatics researcher (CS PhD) • #RNA enthusiast • AI-skeptic but rational • Employed by #CNRS/#Polytechnique but views mine 
Jarno N. Alanko @jnalanko.bsky.social Postdoc in computer science and bioinformatics at the University of Helsinki. Website: https://jnalanko.net. Various writings in English and Finnish: https://blog.jnalanko.net. Also on Mastodon: https://genomic.social/@jnalanko- D Daniel Liu @daniel-c0deb0t.bsky.social work: anthropic, previously: rust/bioinformatics
Daniel Jones @dcjones.bsky.social Computational biologist at Fred Hutchinson Cancer Center (See my work here: https://dcjones.github.io/). I also post about baking, books, and Seattle politics.
Aaron Quinlan (he/him) @aaronquinlan.bsky.social Origins and consequences of genome mutation; software for genomic discovery.
Prof. and Chair of Human Genetics at U. of Utah.
https://www.genetics.utah.edu/
http://quinlanlab.org
Anshul Kundaje @anshulkundaje.bsky.social Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
Fritz Sedlazeck @sedlazeck.bsky.social 
Stephanie Hicks @stephaniehicks.bsky.social Associate Professor of Biostatistics and Biomedical Engineering at Johns Hopkins. stephaniehicks.com
Michael Love @mikelove.bsky.social Genetics, bioinformatics, comp bio, statistics, data science, open source, open science!
Wolfgang Huber @wkhuber.bsky.social Computational Biology and Statistics
Spatial Omics, Precision Oncology
R, Bioconductor, Open Science
https://www.huber.embl.de
Textbook: Modern Statistics for Modern Biology
https://www.huber.embl.de/msmb/ (with @sherlockpholmes.bsky.social)
Constantin Ahlmann-Eltze @const-ae.bsky.social Scientist at Isomorphic Labs. Previously at UCL and EMBL working with Wolfgang Huber. Biology, ML, Python, R, cancer immunology
Susan Holmes🎲🖥️🧬 @sherlockpholmes.bsky.social Statistician,Mother,Prof,Grandmother(she/her)🇫🇷🇵🇹🇺🇸🧪.
🖋️with @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats,OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2
Torsten Seemann @torstenseemann.bsky.social Professor @ University of Melbourne, Australia
Microbial bioinformatics, genomics, software, clinical and public health microbiology
https://tseemann.github.io
Rafael Irizarry @rafalab.bsky.social Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Jian Ma @jianma.bsky.social Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science. https://www.cs.cmu.edu/~jianma/
Sergey Koren @sergek.bsky.social Scientist at NHGRI/NIH. Mapping complete genomes, finished a couple, working on more 🐮🐟🐒. Posts are my own opinion. - P Paul Medvedev @pashadag.bsky.social Algorithmic Bioinformatics Researcher and Teacher. Posts about research results and educational/mentorship topics (for details, see http://bit.ly/380vX22).
Maria Nattestad 🧬💻 @omgenomics.com Co-founder OMGenomics Labs. Creator of Circa https://circa.omgenomics.com, Ribbon, YouTube.com/omgenomics. Worked on DeepVariant+DeepConsensus at Google.
Lukas Weber @lmweber.bsky.social Assistant Professor of Biostatistics, Boston University. Statistical genomics, genomic data science, open science, R programming https://lmweber.org/
Davis McCarthy @davisjmcc.bsky.social Head, Bioinformatics and Cellular Genomics Lab,
St Vincent's Institute of Medical Research, Melbourne. Stats, AI/ML, bioinformatics, genomics, single-cell.
https://www.svi.edu.au/researchers/dr-davis-mccarthy/
Ragothaman Yennamalli @structbioinfo.bsky.social Associate Professor JNU | Computational Biologist | YIM2024 organizer | Editor: CSBJ, BMC Bioinfo | Spl issue Ed: Biophys J | He/Him.
Sergey Nurk @sergeynurk.bsky.social Principal Bionformatician
@nanopore. Ex: Postdoctoral fellow @ NIH; Researcher @ CAB. Views are my own; #StandWithUkraine Support Ukraine!
Fereydoun Hormozdiari @fhormozd.bsky.social Associate Professor @ UC-Davis | Former Senior Director @ Exai Bio | Computational Biology, ML/AI, Genomics, RNA, Cancer
Isaac Virshup @ivirshup.bsky.social Software engineer at CZI, https://scverse.org steering council, check out my https://github.com/ivirshup
Johannes Köster @johanneskoester.bsky.social Professor for Bioinformatics and Computational Oncology
University of Duisburg-Essen
Author of Snakemake, founder of Bioconda
Mervin Fansler @mfansler.bsky.social Postdoc in Cvejic Group, BRIC, Københavns Universitet. PhD from Mayr Lab at Sloan Kettering Institute. Reproducible research enthusiast. Conda Forge R Team. Creator of scUTRquant.
Alex Dobin @alexdobin.com Dad, Homelab, Engineering Manager @ Microsoft
Samuel Lampa @smllmp.bsky.social Fascinated by Living Systems | Clin Micro Bioinfo @ Karolinska | PhD http://pharmb.io | Reproducibility, #SciWorkflows | Curious: Genomic Algos, TEs
R&D: livingsystems.cc
Thinking: livingsystems.substack.com
Married. Dad. Sinner saved by grace.
Ben Kaminow @bkaminow.bsky.social PhD student working at the intersection of ML and drug discovery in the Chodera Lab
Timothy Stiles @stiles.io Genetic, research, and software engineer looking to make friends.
Creator of Poly, an open source Go package for engineering DNA 🧬
Let's engineer weird little guys together.
github.com/bebop/poly
📍San Francisco
Robert Aboukhalil @robert.bio Co-founder at https://omgenomics.com. Creator of https://42basepairs.com, https://sandbox.bio, https://biowasm.com, https://levelupwasm.com. Bioinformatics, genomics.
About me: https://robert.bio
Anna Poetsch @apoetsch.bsky.social Computational Biologist at TU Dresden. Interested in how genomes encode their own stability.
Kez Cleal @kezc.bsky.social Lecturer in cancer bioinformatics at Cardiff University. https://github.com/kcleal
Nathan Roach @natproach.bsky.social Bad opinion haver, leftist, scientist, bioinformatics PhD, Rust lang enthusiast, Python begrudging-acceptor, in that order.
Francesca Finotello 🖥️🧬 @francescafinotello.bsky.social Assistant Professor leading the Computational Biomedicine Group at the University of Innsbruck • Data scientist at the Digital Science Center (DiSC) • Precision medicine and cancer immunotherapy • Mother 🧬🖥️
https://computationalbiomedicinegroup.github.io/
Deniz Gökbuget @denizgoekbuget.bsky.social Principal Scientist @Genentech | Translational research & biomarker development in prostate cancer. Passionate about bridging science and patient impact.
Tim Fennell @tfenne.bsky.social Bioinformatician, Leader, Founder @fulcrumgenomics.bsky.social
https://www.fulcrumgenomics.com
Marta Melé @martamele.bsky.social computational biologist and Group Leader of the Trascriptomics and Functional Genomics Lab at the Barcelona Supercomputing Center
Steven Salzberg @stevensalzberg.bsky.social Bloomberg Distinguished Professor of BME, CS, and Biostats at Johns Hopkins Univ., tennis player, @StevenSalzberg1 on Twitter, lab: salzberg-lab.org, Substack blog: stevensalzberg.substack.com
Pierre Peterlongo @pierrepeterlongo.bsky.social Inria Senior researcher.
Head of the https://team.inria.fr/genscale/ at Inria and Irisa.
Algorithmics for sequencing data analyses, genomics and metagenomics.
Rayan Chikhi @rayanchikhi.bsky.social 
Jon Belyeu @jonbelyeu.bsky.social Bioinformatics scientist at PacBio, previously Illumina. I develop software tools in Rust and Python for genome analysis.
https://orcid.org/0000-0001-5470-8299
Catharine.Aquino @catharineaquino.bsky.social Genomics plus anything else I find interesting. 🇨🇭🇵🇭 Opinions are my own and do not represent my employer.
Albert Vilella, PhD. @albertvilella.bsky.social Bioinformatics Scientist / Next Generation Sequencing, Single Cell and Spatial Biology, Next Generation Proteomics, Liquid Biopsy, SynBio, AI/ML in biotech // http://albertvilella.substack.com
Gary Schroth @genomics-guy.bsky.social Genomics, Cell Biology, Technology, Innovation, Bay Area Sports, Good Food, Progressive Politics, Travel, Truth and Dogs.
All opinions are my own.
Keith Robison @omicsomics.bsky.social Computational biologist & blogger
Toumy Guettouche @omics.bsky.social Genomics & Proteomics & Democracy enthusiast. Extracellular Vesicles, Oncology, Early Detection, Screening. Opinions are my own. 🇩🇪in MA, 🇺🇸
⚽️⚪️🔴🐊 ⚓️
ORCID:0009-0005-7342-3279
PacBio @pacbio.bsky.social Our mission is to enable the promise of genomics to better human health by creating the world’s most advanced sequencing technologies. 
Element Biosciences @elembio.bsky.social Opening the world of biology to new possibilities. #multiomics #5dmultiomics elementbiosciences.com