BrainGlobe @brainglobe.info We build open source computational neuroanatomy software that works across species.
https://brainglobe.info
Posts by @adamltyson.com
MannE @blatus.bsky.social 🧠 scientist and youth ⚽️ coach
NE Mpls Strong
Samuel Le Meur-Diebolt @sdiebolt.bsky.social Research Fellow in CortexLab @UCL 🧑🔬 • Studying macroscale brain activity using fUSI in mice 🐭🧠
SciPy Conference 2026 @scipyconf.bsky.social SciPy 2026 Conference for Scientific and Technical Computing topics in Python. Tutorials July 13-14, Conference July 15-17, Sprints July 18-19.
Ashley A @aganders3.bsky.social Not actually a cactus
@simonecoppola.bsky.social @simonecoppola.bsky.social Postdoctoral researcher in the Holden Lab (University of Warwick)
Passionate about single-molecules, advanced microscopy, image processing and microbial life!
Ben Gallusser @bengallusser.bsky.social Deep Learning, Computer Vision, Biology
Uri Manor @manorlaboratory.bsky.social Ass. Prof & Director Goeddel Family Technology Sandbox; CZI Imaging Scientist; Hard-of-hearing; Follows≠endorse; ❤️ organelles/deep-learning/cochlea/neurons
Kyle Niemeyer, PhD @kyleniemeyer.bsky.social Associate Professor of Mechanical Engineering at Oregon State University (he/him). Research in combustion and fluid dynamics, numerical methods and HPC. Open science and open source software advocate. Big SF/F reader and DIY+woodworking enthusiast.
Yohsuke T. Fukai @fukaity.bsky.social Postdoctoral Researcher at BDR, RIKEN
Nonequilibrium physics of living matter Riken Hakubi research team.
Twitter: https://twitter.com/fukaity
HP: https://yfukai.net/
Giulia Paci @giuliapaci.bsky.social Physicist having a go at biology, EMBO postdoctoral fellow @UCL in the Mao group, @EMBL alumna
Ax=b @melissawm.pynews.com.br.ap.brid.gy Mathematician, feminist, recovering academic, geek, mom. NumPy, SciPy, napari and other OSS at Quansight 🇧🇷 (en/pt_br)
🌉 bridged from ⁂ https://pynews.com.br/@melissawm, follow @ap.brid.gy to interact
Adam Tyson @adamltyson.com Head Research Engineer at Sainsbury Wellcome Centre, UCL. I lead @neuroinformatics.dev & @brainglobe.info. We build open source software for neuroscience and machine learning.
Runner, cyclist, sandwich enthusiast.
https://adamltyson.com
Kara Peak @karapeak.bsky.social 🤰🏻Postdoc with Victor Barocas & Kyoko Yoshida at the University of Minnesota
🫀 AHA Fellow
🫁 PhD with Victor Varner at the University of Texas at Dallas
🥼soft-tissue biomechanics, women’s reproductive health, development, computational modeling
Jean-Yves Tinevez @jytinevez.bsky.social Research engineer and core facility manager at the Institut Pasteur
https://research.pasteur.fr/en/team/image-analysis-hub/
Everything #TrackMate #Mastodon-sc (the tool to track lineages in microscopy videos, not the social networks etc).
Views are my own
Christoph Sommer @sommerinvienna.bsky.social Image Analysis
#ISTAustria
Kyle Harrington @kyleharrington.com Images, AI, ML, and ALife.
Former: @hampshirecolg
@brandeisuniversity.bsky.social
@harvardmed.bsky.social
@uidaho.bsky.social
@hhmijanelia.bsky.social
@mdc-berlin.bsky.social
@ORNL.
Now @biohub.org.
Opinions are mine.
Joel Lüthi @joelluethi.bsky.social Head of Research and Development of the BioVisionCenter at the University of Zurich
Alister Burt @alisterburt.bsky.social Computational Cryo-EM/ET at Genentech
Love people, the outdoors and building stuff
Complexity is the enemy
All opinions my own
Ian - Cambridge Wild turkey fanboy @ianhi.bsky.social huge fan of the local Cambridge turkeys, also like safe streets and making better scientific software. He/Him/His
Kota Miura @kbias.bsky.social bioimage analysis, NEUBIAS, GloBIAS
https://www.globias.org/
Sebi @sebi06.bsky.social I am a Software Architect for AI Solutions, Python Fan, Microscopist Image Analyst and really like Skiing.
Science is like magic but real.
Tracy Teal @tracykteal.bsky.social 
Hanjin Liu @liu-hanjin.bsky.social PhD in biophysics. Interested in microtubule dynamics and MAPs. Cryo-ET, fluorescence microscopy and programming. (he/him).
ORCID: 0009-0006-5724-8121
github: https://github.com/hanjinliu
Stéfan van der Walt @mentat.za.net Researcher at UC Berkeley, mainly focused on Scientific Python. South African raising kids in the Californian mountains. Otherwise lives in Emacs & org-mode. Enjoys running, philosophy, history, and building things with others.
Fabrizio Musacchio @fabmusacchio.bsky.social Physicist by training, working in computational neuroscience at the @dzne.science. Interested in how neural dynamics and learning shape brain function and behavior, using modeling and data analysis.
🌍fabriziomusacchio.com
🐘mastodon.social/@FabMusacchio
Mackenzie Weygandt Mathis @trackingactions.bsky.social Scientist 👩🔬 & EPFL Assoc Prof 🇨🇭 | Devloper of DeepLabCut.org , 🦓 cebra.ai | neuroscience & ML 🧠 mackenziemathislab.org
Daniel Krentzel @danielkrentzel.bsky.social Hunting for new antibiotics with deep learning at @pasteur.fr 🧫 | Previously @crick.ac.uk and 🎓 @imperialcollegeldn.bsky.social
Johannes Soltwedel @jo-soltwedel.bsky.social Research software engineer @gerbi-gmb.de for all things #OME-ZARR, #NGFF, FAIR data.
Physicist, Python code-jockey, train enthusiast.
Spencer Nystrom @snystrom.com Data science, genomics, software development. Formerly: Eukaryotic gene regulation, phage, graph genomes. On hiatus building distributed systems.
snystrom.com
Juan Nunez-Iglesias @jni.codes Co-founder, core developer, and steering council member of @napari.org
Also other FOSSy and Science-y things.
I prefer Mastodon (profile at https://fosstodon.org/@jni) but begrudgingly checking things out here. 😂
Grzegorz Bokota @czaki-pl.bsky.social 
Carol Willing @willingc.bsky.social Python is forever🐍
napari @napari.org n-dimensional image viewer for Python
napari @napari.fosstodon.org.ap.brid.gy I am an n-dimensional image viewer for Python
🌉 bridged from ⁂ https://fosstodon.org/@napari, follow @ap.brid.gy to interact
Dichromat Chloe (4% of scientists) @dichromat-chloe.bsky.social Advocating for color accessibility in scientific figures.
4% of scientists are colorblind. 
Alexandria Ocasio-Cortez @aoc.bsky.social Waitress turned Congresswoman for the Bronx and Queens. Grassroots elected, small-dollar supported. A better world is possible.
ocasiocortez.com
Katherine Brown @katherine-brown.bsky.social Publishing Director at The Company of Biologists @biologists.bsky.social. Still with a big soft spot for #devbio. Opinions my own. she/her
https://biologists.com
Mike-roscope @iamichaelnelson.bsky.social Grad student in Eliceiri lab at UW-Madison. Admin on Image.sc forum and major image analysis enthusiast. Migrating from 2D to 3D analysis, and pathology to lightsheet (or combine both!)
eurobioimaging.bsky.social @eurobioimaging.bsky.social We are Europe's gateway to biological & biomedical imaging expertise. Visit our website: www.eurobioimaging.eu
Profile image by Olivia Harris, Cambridge University.
ilastik-team.bsky.social @ilastik-team.bsky.social Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
Martin Schätz @schatzcz.bsky.social BioImage Analysis at Vinicna Microscopy Core Facility & assistant professor at UCT Prague focused on medical signal and image analysis. Spearheading the CzechBIAS.
Nico Stuurman @nicostuurman.bsky.social 
AI4Life @ai4life.bsky.social Artificial Intelligence For Image Data Analysis in The Life Sciences, funded by Horizon Europe, created to serve YOU! 
Shantanu Singh @shantanu-singh.cc computation biology, drug discovery, computer vision, microscopy, statistics, machine learning, all happening at https://carpenter-singh-lab.broadinstitute.org/
Alex Payne-Dwyer @alexpaynedwyer.bsky.social Super-res, single molecule tracking & optical tweezer microscopist | biological condensates & physics of phase separation | +ve research culture | senior research technical specialist @ York, UK 🧪🌱🧫🫧 🔬
Kari Herrington @kahsage.bsky.social Artist and scientist that helps people on microscopes!
Instagram: https://instagram.com/kah_sage
Omar Quintero-Carmona, PhD @omqu.bsky.social Teacher-scholar, myosin enthusiast, microscopist, Associate Professor of Biology at University of Richmond. Senior Education Advisor for The Allen Institute. 🇵🇷🔬📷🤺⚽️👨🏾🔬
Ulrike Boehm @ulrikeboehm.bsky.social R&D Scientist at ZEISS Group | PhD in Physics | Spearheading Development of Innovative Optics & Photonics Solutions
Website: http://ulrikeboehm.org
Elena Nicolay @enicolay.bsky.social Doctoral Researcher at mTox lab, @ufz.de Leipzig 🧪🌊 | Intrigued by #EntericNervousSystem and #InnateImmunity in #Zebrafish
🐟🔬💻 https://www.ufz.de/index.php?de=50905
GloBIAS @globias.bsky.social Global BioImage Analysts’ Society, a registered non-profit association. Join us to shape BioImage Analysis on a global level. www.globias.org
Anna Klemm @ahklemm.bsky.social BioImage Analyst
Head of BioImage Informatics, SciLifeLab
NBIS, Sweden
https://www.scilifelab.se/units/bioimage-informatics/
Stefania Marcotti @lankylaste.bsky.social Data and image analysis for all things bio | Computational tinkerer | Researcher | Bioimage analyst
Nicolas Chiaruttini @nkiaru.bsky.social Bio-Image Analyst for the Biochemistry Department at UNIGE
https://nicolas.chiaruttini.org
NFDI4BIOIMAGE @nfdi4bioimage.bsky.social NFDI4BIOIMAGE, a consortium of the NFDI in Germany, is a legally non-independent collaboration project. It focuses on research data management for bioimaging and image analysis. The consortium does not act autonomously towards third parties.
DrLachie @drlachie.bsky.social BioImage Analyst at @WEHI_research. Foodie, geek, Dad. Functions on coffee and red wine. Bringer of #MicroscopistsNightmares. He/Him
Elnaz @mycroscopy.bsky.social Microscopist and image analyst in the making. Core facility staff at BIU @helsinkiuni and loving it.🔬👩🏻🔬👩🏻💻
Johannes Hohlbein @hohlbeinlab.bsky.social Single-molecule stuff, 🔬, 🦠 , 🧬, ☕, BTU, WUR, he/him, 🇩🇪->🇨🇿->🇩🇪->🇬🇧->🇳🇱+🇩🇪, Pubs: https://scholar.google.nl/citations?hl=en&user=WZZAydwAAAAJ&view_op=list_works&sortby=pubdate
Stephen Royle @steveroyle.bsky.social I'm into chord changes and cell biology.
Professor - University of Warwick. Director - The Company of Biologists. Views are my own and not those of any organisation I am associated with.
Mastodon: @steveroyle@biologists.social
Lab: https://roylelab.org
Florian Jug @florianjug.bsky.social Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.
Guillaume Jacquemet @guijacquemet.bsky.social Associate Prof at Abo Akademi University, Turku, Finland.
Cell biologist interested in microscopy and image analysis. My opinions are my own.
cellmig.org
Martin Jones @martinjones.bsky.social Ex-physicist in a biology institute, working on image analysis and building new hardware at the Francis Crick Institute
ORCID: 0000-0003-0994-5652
Ricardo Henriques @henriqueslab.bsky.social @AIOpticalBioLab.bsky.social. Group Leader #ITQB & H. Prof #UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own
- henriqueslab.org -
Max Schelski @maxschelski.bsky.social Neuroscientist. Developing mathematical models of cell biology underlying synaptic plasticity. Coding Python.
PhD done @ Bradke lab #NeuroDev #Microtubules
PostDoc in Tchumatchenko group. #SynapticPlasticity #Dendrites
https://github.com/maxschelski/
Matt Tyska @tyskalabactual.bsky.social Interested in how the cytoskeleton controls cell morphology and function; yes to microscopy.
https://lab.vanderbilt.edu/tyska-lab/
Nathalie Jurisch-Yaksi @nathaliejuya.bsky.social Biologist interested in cilia, brain, cerebrospinal fluid, choroid plexus, fishes and many more things.
Group leader at NTNU in Trondheim, Norway.
Beside science, I enjoy outdoor activities including hiking, sailing and skiing.
Joachim Fuchs @joachimfuchs.bsky.social Postdoc Hiesinger-Lab (FU Berlin) working with #Drosophila brain development (https://lab.flygen.org) previously PhD Eickholt Lab (Charité Berlin) | Filopodia & AxonBranching & Synapse formation | FijiSc | R | DataViz | UltimateFrisbee | he/him
Spirochrome @spirochrome.com Our main focus is to offer innovative tools for live cell fluorescence imaging to the scientific community.
https://spirochrome.com/
Maik Bischoff @maikbischoff.bsky.social 🔬 Junior Group Leader in Münster, Germany.
🌐 Lab Website: https://www.bischofflab.com/
🌀 Morphogenesis, collective cell migration, and chiral organ development in #Drosophila.
🐍 Animal photos: 📷 instagram.com/maikscritters
Maureen Barr @barrlab.bsky.social Scientist studying tiny things: cilia, extracellular vesicles (EVs), C. elegans; ADPKD; Secretary Genetics Society of America; distinguished prof at Rutgers; three boy mom; I can deadlift an adult son; she/her; my opinions
https://barrlab.rutgers.edu/
Stacey Ogden 🦔 @labogden.bsky.social Cell and Developmental Biologist @ St. Jude Children's Research Hospital - 🦔 signaling in 🧠🫀&🫁 - science 🧪, academia, DevBio research, mentoring, scicomm, 🔬, birds 🪶, hikes - fueled by ☕ & 🧘🏼♀️ - Y’all means all - Views my own and not SJCRH's
Alexandre Dumoulin @axonsalex.bsky.social Developmental Neurobiologist at UZH | Microscopy Enthusiast. Using the chicken embryo to decipher the molecular mechanisms of neural circuit formation. Fascinated by axonal growth cones, primary cilia, and extracellular vesicles.
Beth Cimini 🔬💻📊 @bethcimini.bsky.social She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.
Anne Carpenter @drannecarpenter.bsky.social Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.
The Jackson Laboratory @jax.org Est. 1929, JAX is a nonprofit scientific research institute specializing in genetics, genomics, mouse, and cellular models of disease. www.jax.org
allen institute @alleninstitute.org accelerating science for a healthier world
Brian Northan @truenorth-ia.bsky.social Contract Research and Development Engineer, Image Processing. XC skier. Stockade-athon 15 km Running Road Race Director. 
Prakash Lab at Stanford @prakashlab.bsky.social Curiosity Driven Science
David Solecki @so-lets-kilab70.bsky.social Posting our lab life studying the neuronal cytoskeleton and chromatin with cool microscopes🔬Proud #GenX, #firstgen college, #intj @RITscience @stonybrooku Alum
Verified: https://orcid.org/0000-0001-8481-0403
BioVoxxel (Jan Brocher) @biovoxxel.de BioImage Analyst, Consulting, Customized Analysis Programming Founder, PhD in biology, Fiji/ImageJ, Inkscape, Java
🧪🔬💻
🇩🇪 🇬🇧 🇪🇦
Homepage: biovoxxel.de
All relevant BioVoxxel Links: linktr.ee/biovoxxel
LinkedIn Newsletter: http://bit.ly/46mYBL7
Martin Weigert @maweigert.bsky.social Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ 
Kevin Yamauchi @kevinyamauchi.bsky.social building open source image analysis software for science
🔬 co-founder and member of @image.coop
🏝️ core developer @napari.org
https://kevinyamauchi.github.io/
HMS Image Analysis Collaboratory @hms-iac.bsky.social News from the Image Analysis Collaboratory at Harvard Medical School. Teaching, research and promoting best practices in Bioimage Analysis.
Get in touch: https://iac.hms.harvard.edu/.
Elisabeth Kugler @kuglerelisabeth.bsky.social Director Zeeks - Art for Geeks | Biomedical Image Analyst | Science Communicator | Host of the Keep It Science Podcast
www.zeeks-artforgeeks.com
Kris Kubow @kriskubow.bsky.social microscopist 🔬; educator; still trying to decide whether I'm a scientist or engineer (or both); Core Director, Assoc Prof Biology, JMU; opinions my own
Stéphane Rigaud @strigaud.bsky.social Bio-image Analyst, Computer scientist, and plenty of other things that end in «-ist»
Juan Nunez-Iglesias @jni.fosstodon.org.ap.brid.gy Core dev and co-founder napari.org
Core dev scikit-image.org
Co-author elegant-scipy.org
Research Fellow at https://www.monash.edu/researchinfrastructure/eresearch […]
[bridged from https://fosstodon.org/@jni on the fediverse by https://fed.brid.gy/ ]
Vanessa Orr @vorrphd.bsky.social Posts are my own, reposts & follows ≠ endorsement
𝙲𝚞𝚛𝚝𝚒𝚜 𝚁𝚞𝚎𝚍𝚎𝚗 (@ctrue@mstdn.science) @ctrue.bsky.social Not as bad as I feared, but not as good as I hoped.
Carsen Stringer (she/her) @computingnature.neuromatch.social.ap.brid.gy group leader @ HHMIJanelia, thinking about thinking, 🔬#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | Ⓥ | […]
[bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]
Erick Ratamero @erickratamero.com Cross-posting from idlethumbs.social/@ratamero
half respectable professional (can you believe they let me manage data at EMBL?), half nerdy gremlin. views my own etc etc. he/him/ele
https://erickratamero.com
Sara McArdle @saramcardle.bsky.social Staff Scientist at the La Jolla Institute Microscopy and Histology Facility. I love cat videos and microscopy images and I believe that Matlab is better than Python :)
Constantin Pape @cppape.bsky.social Group leader @ Uni Göttingen for Computational Cell Analytics and @ MPINAT for Machine Intelligence in the Life Sciences. AI for biology and medicine with a focus on microscopy.
https://user.informatik.uni-goettingen.de/~pape41/
Virginie Uhlmann @virginieuhlmann.bsky.social Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.
Michelle Itano @michelleitano.bsky.social Director Neuroscience Microscopy Core at UNC-Chapel Hill, CZI Imaging Scientist, BioTechniques EIC, AcaMama (she/her)
Josh Moore @joshmoore.bsky.social Standardizing open bioimaging data infrastructure
Technical Director – @gerbi-gmb.de
Member & Co-Founder – @image.coop
TA1 Lead – @nfdi4bioimage.bsky.social
#OSS Maintainer for @openmicroscopy.org and @zarr.dev
BiaPy @biapyx.bsky.social Accessible deep learning on bioimages
Site: https://biapyx.github.io/
Doc: https://biapy.readthedocs.io/en/latest/
Code: https://github.com/BiaPyX/BiaPy
Peter Sobolewski @psobolewskiphd.bsky.social #Duke #UCSD Alum; Recovering Academic; Research IT
@jacksonlab.bsky.social; core dev @napari.fosstodon.org.ap.brid.gy
Talley Lambert @talley.codes Microscopist & Python developer at Harvard Med. Creator @fpbase.org
Suganya @sugansivaguru.bsky.social Postdoc @CiminiLab,Broad Institute